FFCP PHASE1:Hg19::chr6:83073525..83073551,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7162 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12004 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=162bp_to_uc010kbj.2_5end | |||
|coexpression_cluster_id=C1089 | |||
|description=CAGE_peak_1_at_TPBG_5end | |||
|id=chr6:83073525..83073551,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.11e-25!180;CL:0000057!8.03e-18!75;CL:0002321!9.07e-14!248;CL:0000220!1.20e-13!246;CL:0000187!2.24e-12!54;CL:0000680!2.28e-12!57;CL:0000056!2.28e-12!57;CL:0000355!2.28e-12!57;CL:0000183!4.52e-12!59;CL:0000393!2.22e-10!60;CL:0000211!2.22e-10!60;CL:0000192!2.22e-10!42;CL:0000514!2.22e-10!42;CL:0000548!4.58e-09!679;CL:0000004!4.58e-09!679;CL:0000255!4.58e-09!679;CL:0000066!1.31e-08!254;CL:0000012!1.34e-08!682;CL:0000359!1.98e-08!32;CL:0000222!3.83e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.13e-08;55!CL:0000359;4.98e-08;32!CL:0000192;8.58e-08;43!CL:0000057;1.53e-07;73!CL:0000723;2.42e-07;61!CL:0000187;5.63e-07;55!CL:0000048;8.05e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.02e-18,76;CL:0002321,2.33e-13,250;CL:0000187,1.06e-12,55;CL:0000680,1.08e-12,58;CL:0000056,1.08e-12,58;CL:0000355,1.08e-12,58;CL:0000192,1.12e-10,43;CL:0000514,1.12e-10,43;CL:0000393,2.07e-10,61;CL:0000211,2.07e-10,61;CL:0000359,1.66e-08,32;CL:0000066,3.68e-08,253;CL:0000222,6.98e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;8.58e-08;43!CL:0000355;3.93e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!6.24e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.39e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.29e-08,14 | |||
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| |||
|short_description=p1@TPBG | |||
}} |
Revision as of 21:58, 13 September 2013
Short description: | p1@TPBG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TPBG_5end |
Coexpression cluster: | C1089_Smooth_Small_Fibroblast_Prostate_anaplastic_mesenchymal_nasal |
Association with transcript: | 162bp_to_uc010kbj.2_5end |
EntrezGene: | TPBG |
HGNC: | 12004 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.02e-18 | 76 |
embryonic cell | 2.33e-13 | 250 |
muscle cell | 1.06e-12 | 55 |
muscle precursor cell | 1.08e-12 | 58 |
myoblast | 1.08e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.08e-12 | 58 |
smooth muscle cell | 1.12e-10 | 43 |
smooth muscle myoblast | 1.12e-10 | 43 |
electrically responsive cell | 2.07e-10 | 61 |
electrically active cell | 2.07e-10 | 61 |
vascular associated smooth muscle cell | 1.66e-08 | 32 |
epithelial cell | 3.68e-08 | 253 |
mesodermal cell | 6.98e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.29e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.