FFCP PHASE1:Mm9::chr2:119055621..119055649,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72112|HGNC=|MCL_coexpression_id=12|UniProt=Q7TT52|association_with_transcript=0bp_to_ENSMUST00000076084_5end|description=CAGE_peak_3_at_Ppp1r14d_5end|id=chr2:119055621..119055649,-|ontology_enrichment_celltype=CL:0002563!6.77e-11!9;CL:0002251!6.77e-11!9;CL:0000239!6.47e-08!6;CL:0000677!6.47e-08!6;CL:0000212!6.47e-08!6;CL:0000584!6.47e-08!6|ontology_enrichment_celltype_v019_2=CL:0002563,6.99e-16,9;CL:0002251,6.99e-16,9;CL:0000239,2.58e-11,6;CL:0000677,2.58e-11,6;CL:0000584,2.58e-11,6;CL:0000075,1.43e-09,7;CL:0002076,9.33e-09,15;CL:0000066,1.04e-08,25;CL:0000682,4.80e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.17e-22!43;UBERON:0005409!7.83e-20!59;UBERON:0000344!1.28e-17!15;UBERON:0001242!1.33e-15!13;UBERON:0000060!1.33e-15!13;UBERON:0001262!1.33e-15!13;UBERON:0004786!1.33e-15!13;UBERON:0004923!5.17e-13!24;UBERON:0003350!6.77e-11!9;UBERON:0004808!6.77e-11!9;UBERON:0001277!6.77e-11!9;UBERON:0000485!1.91e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.47e-47,31;UBERON:0005409,7.45e-33,47;UBERON:0000344,3.23e-26,15;UBERON:0001242,4.09e-23,13;UBERON:0001262,4.09e-23,13;UBERON:0004786,4.09e-23,13;UBERON:0004923,6.28e-17,24;UBERON:0003350,6.99e-16,9;UBERON:0004808,6.99e-16,9;UBERON:0001277,6.99e-16,9;UBERON:0000485,1.23e-12,11;UBERON:0001007,3.61e-10,116;UBERON:0001555,3.61e-10,116;UBERON:0007026,3.61e-10,116;UBERON:0004119,7.43e-10,118;UBERON:0000925,7.43e-10,118;UBERON:0006595,7.43e-10,118;UBERON:0004921,9.47e-09,114;UBERON:0002108,1.54e-08,4;UBERON:0000331,9.31e-07,3;UBERON:0002116,9.31e-07,3;UBERON:0001204,9.31e-07,3;UBERON:0001168,9.31e-07,3|phase1_expression=0,27.9180326111489,29.5749505603198,20.8700305801713,26.5474736871564,9.9048770428015,7.2419918584613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5593104742,16.0586496747019,34.4539178469012,29.2918157388171,27.5803177837938,34.2042155021473,22.6827116783938,17.2949798311138,0,0,0,17.0422455653252,16.1247605997738,11.637653306955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,4.22480354960522,0,0,0,0,0,0,0,0,2.96633961281249,0,0,0,0,0,5.59175283654366,0,0,33.2094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.1799367582943,33.8496725329337,0,0,1.80414445850931,4.03367049246685,13.3426826306922,21.1150444984941,33.6915633696603,27.0106285747378,15.834118154417,18.9008648439093,16.3769833180061,19.7740269903929,38.0402967779462,44.0102213892152,0,0,0,0,0,0,0,0,0.156998727841375,0.616985819609003,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518054945597687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,3.87642439752332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0.164140899745061,28.2736411530955,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.756037385752609,0.418176592028937,1.9652630737156,0,0.0826534557253359,0,12.0541925161367,0,0,0,0,0.194451188344048,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,1.11123363900808,1.03017528619447,0.962757628775446,0.252697211763798,1.01391719956096,0.377252682772152,0.842773567228942,0.704276676453562,0.689225627467359,1.42888107384922,0.811190281613988,1.73618298417335,0.824171801606613,0.883193520806384,1.37147700954166,1.24233064311536,2.14592570952589,0.872078499793971,1.2234219453993,1.26921911837515,0.548783918618318,0,0.950628796921032,0.561142271657738,0.830445126869219,0.788035859004508,0.409231043169689,0.77468420592983,0.192906610981141,0,2.33931608445408,0.644613162144895,0,0,0|short_description=p3@Ppp1r14d}} | ||
|EntrezGene=72112 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q7TT52 | |||
|association_with_transcript=0bp_to_ENSMUST00000076084_5end | |||
|description=CAGE_peak_3_at_Ppp1r14d_5end | |||
|id=chr2:119055621..119055649,- | |||
|ontology_enrichment_celltype=CL:0002563!6.77e-11!9;CL:0002251!6.77e-11!9;CL:0000239!6.47e-08!6;CL:0000677!6.47e-08!6;CL:0000212!6.47e-08!6;CL:0000584!6.47e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.99e-16,9;CL:0002251,6.99e-16,9;CL:0000239,2.58e-11,6;CL:0000677,2.58e-11,6;CL:0000584,2.58e-11,6;CL:0000075,1.43e-09,7;CL:0002076,9.33e-09,15;CL:0000066,1.04e-08,25;CL:0000682,4.80e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.17e-22!43;UBERON:0005409!7.83e-20!59;UBERON:0000344!1.28e-17!15;UBERON:0001242!1.33e-15!13;UBERON:0000060!1.33e-15!13;UBERON:0001262!1.33e-15!13;UBERON:0004786!1.33e-15!13;UBERON:0004923!5.17e-13!24;UBERON:0003350!6.77e-11!9;UBERON:0004808!6.77e-11!9;UBERON:0001277!6.77e-11!9;UBERON:0000485!1.91e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.47e-47,31;UBERON:0005409,7.45e-33,47;UBERON:0000344,3.23e-26,15;UBERON:0001242,4.09e-23,13;UBERON:0001262,4.09e-23,13;UBERON:0004786,4.09e-23,13;UBERON:0004923,6.28e-17,24;UBERON:0003350,6.99e-16,9;UBERON:0004808,6.99e-16,9;UBERON:0001277,6.99e-16,9;UBERON:0000485,1.23e-12,11;UBERON:0001007,3.61e-10,116;UBERON:0001555,3.61e-10,116;UBERON:0007026,3.61e-10,116;UBERON:0004119,7.43e-10,118;UBERON:0000925,7.43e-10,118;UBERON:0006595,7.43e-10,118;UBERON:0004921,9.47e-09,114;UBERON:0002108,1.54e-08,4;UBERON:0000331,9.31e-07,3;UBERON:0002116,9.31e-07,3;UBERON:0001204,9.31e-07,3;UBERON:0001168,9.31e-07,3 | |||
|phase1_expression=0,27.9180326111489,29.5749505603198,20.8700305801713,26.5474736871564,9.9048770428015,7.2419918584613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5593104742,16.0586496747019,34.4539178469012,29.2918157388171,27.5803177837938,34.2042155021473,22.6827116783938,17.2949798311138,0,0,0,17.0422455653252,16.1247605997738,11.637653306955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,4.22480354960522,0,0,0,0,0,0,0,0,2.96633961281249,0,0,0,0,0,5.59175283654366,0,0,33.2094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.1799367582943,33.8496725329337,0,0,1.80414445850931,4.03367049246685,13.3426826306922,21.1150444984941,33.6915633696603,27.0106285747378,15.834118154417,18.9008648439093,16.3769833180061,19.7740269903929,38.0402967779462,44.0102213892152,0,0,0,0,0,0,0,0,0.156998727841375,0.616985819609003,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518054945597687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,3.87642439752332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0.164140899745061,28.2736411530955,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.756037385752609,0.418176592028937,1.9652630737156,0,0.0826534557253359,0,12.0541925161367,0,0,0,0,0.194451188344048,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,1.11123363900808,1.03017528619447,0.962757628775446,0.252697211763798,1.01391719956096,0.377252682772152,0.842773567228942,0.704276676453562,0.689225627467359,1.42888107384922,0.811190281613988,1.73618298417335,0.824171801606613,0.883193520806384,1.37147700954166,1.24233064311536,2.14592570952589,0.872078499793971,1.2234219453993,1.26921911837515,0.548783918618318,0,0.950628796921032,0.561142271657738,0.830445126869219,0.788035859004508,0.409231043169689,0.77468420592983,0.192906610981141,0,2.33931608445408,0.644613162144895,0,0,0 | |||
|short_description=p3@Ppp1r14d | |||
}} |
Revision as of 21:46, 13 September 2013
Short description: | p3@Ppp1r14d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ppp1r14d_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000076084_5end |
EntrezGene: | Ppp1r14d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.99e-16 | 9 |
epithelial cell of alimentary canal | 6.99e-16 | 9 |
brush border epithelial cell | 2.58e-11 | 6 |
gut absorptive cell | 2.58e-11 | 6 |
enterocyte | 2.58e-11 | 6 |
columnar/cuboidal epithelial cell | 1.43e-09 | 7 |
endo-epithelial cell | 9.33e-09 | 15 |
epithelial cell | 1.04e-08 | 25 |
M cell of gut | 4.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.47e-47 | 31 |
gastrointestinal system | 7.45e-33 | 47 |
mucosa | 3.23e-26 | 15 |
intestinal mucosa | 4.09e-23 | 13 |
wall of intestine | 4.09e-23 | 13 |
gastrointestinal system mucosa | 4.09e-23 | 13 |
organ component layer | 6.28e-17 | 24 |
epithelium of mucosa | 6.99e-16 | 9 |
gastrointestinal system epithelium | 6.99e-16 | 9 |
intestinal epithelium | 6.99e-16 | 9 |
simple columnar epithelium | 1.23e-12 | 11 |
digestive system | 3.61e-10 | 116 |
digestive tract | 3.61e-10 | 116 |
primitive gut | 3.61e-10 | 116 |
endoderm-derived structure | 7.43e-10 | 118 |
endoderm | 7.43e-10 | 118 |
presumptive endoderm | 7.43e-10 | 118 |
subdivision of digestive tract | 9.47e-09 | 114 |
small intestine | 1.54e-08 | 4 |
ileal mucosa | 9.31e-07 | 3 |
ileum | 9.31e-07 | 3 |
mucosa of small intestine | 9.31e-07 | 3 |
wall of small intestine | 9.31e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.