FFCP PHASE1:Hg19::chr6:68596984..68596998,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C510|description=CAGE_peak_at_chr6:68596984..68596998,-|id=chr6:68596984..68596998,-|ontology_enrichment_celltype=CL:0000763!4.93e-20!112;CL:0000049!4.93e-20!112;CL:0000054!1.62e-17!2;CL:0000137!1.62e-17!2;CL:0000092!1.62e-17!2;CL:0002032!1.33e-12!165;CL:0000837!1.33e-12!165;CL:0000037!5.83e-12!172;CL:0000566!5.83e-12!172;CL:0000988!3.96e-11!182|ontology_enrichment_celltype_v019=CL:0000054;1.82e-11;2!CL:0000137;1.82e-11;2!CL:0000092;1.82e-11;2!CL:0000763;3.77e-09;100|ontology_enrichment_celltype_v019_2=CL:0000763,9.38e-18,108;CL:0000049,9.38e-18,108;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000054,1.82e-11,2;CL:0000137,1.82e-11,2;CL:0000092,1.82e-11,2;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177|ontology_enrichment_development_v019=CL:0000049;1.55e-08;108|ontology_enrichment_disease=DOID:8692!1.01e-63!31;DOID:1240!4.29e-50!39;DOID:1036!2.93e-49!8;DOID:2531!3.33e-48!51;DOID:0060083!3.33e-48!51;DOID:0050686!8.21e-18!137;DOID:200!1.62e-17!2;DOID:4305!1.62e-17!2;DOID:162!2.61e-14!235;DOID:14566!6.20e-14!239;DOID:0060085!7.98e-10!1;DOID:3165!7.98e-10!1;DOID:0060121!7.98e-10!1;DOID:2438!7.98e-10!1;DOID:4418!7.98e-10!1|ontology_enrichment_disease_v019=DOID:1036;1.06e-61;8!DOID:8692;1.46e-51;31!DOID:1240;3.27e-33;39!DOID:2531;1.09e-26;51!DOID:0060083;1.09e-26;51!DOID:0060085;1.53e-21;1!DOID:3165;1.53e-21;1!DOID:0060121;1.53e-21;1!DOID:2438;1.53e-21;1!DOID:4418;1.53e-21;1!DOID:200;1.82e-11;2!DOID:4305;1.82e-11;2|ontology_enrichment_disease_v019_2=DOID:1036,1.75e-61,8;DOID:8692,5.84e-51,31;DOID:1240,1.76e-40,39;DOID:2531,2.84e-38,51;DOID:0060083,2.84e-38,51;DOID:0060085,1.53e-21,1;DOID:3165,1.53e-21,1;DOID:0060121,1.53e-21,1;DOID:2438,1.53e-21,1;DOID:4418,1.53e-21,1;DOID:0050686,6.15e-14,137;DOID:200,1.82e-11,2;DOID:4305,1.82e-11,2;DOID:162,6.25e-08,235;DOID:14566,9.40e-08,239|ontology_enrichment_uberon=UBERON:0001282!3.00e-09!1;UBERON:0009842!3.00e-09!1;UBERON:0003704!3.00e-09!1;UBERON:0001171!3.00e-09!1;UBERON:0001172!3.00e-09!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,1.94773164164733,0,0.456469358066384,0,0,0,0.1605880751037,0,0,0,2.76516687877612,2.90778940260141,2.50273712567863,0.781552381608161,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0.627921025580099,0,2.03036094555463,2.15668787749514,2.85296697858933,2.08729105996604,0.635746315921515,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16015296279268,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67927368271232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:68596984..68596998,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C510 | |||
|description=CAGE_peak_at_chr6:68596984..68596998,- | |||
|id=chr6:68596984..68596998,- | |||
|ontology_enrichment_celltype=CL:0000763!4.93e-20!112;CL:0000049!4.93e-20!112;CL:0000054!1.62e-17!2;CL:0000137!1.62e-17!2;CL:0000092!1.62e-17!2;CL:0002032!1.33e-12!165;CL:0000837!1.33e-12!165;CL:0000037!5.83e-12!172;CL:0000566!5.83e-12!172;CL:0000988!3.96e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000054;1.82e-11;2!CL:0000137;1.82e-11;2!CL:0000092;1.82e-11;2!CL:0000763;3.77e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.38e-18,108;CL:0000049,9.38e-18,108;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000054,1.82e-11,2;CL:0000137,1.82e-11,2;CL:0000092,1.82e-11,2;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177 | |||
|ontology_enrichment_development_v019=CL:0000049;1.55e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!1.01e-63!31;DOID:1240!4.29e-50!39;DOID:1036!2.93e-49!8;DOID:2531!3.33e-48!51;DOID:0060083!3.33e-48!51;DOID:0050686!8.21e-18!137;DOID:200!1.62e-17!2;DOID:4305!1.62e-17!2;DOID:162!2.61e-14!235;DOID:14566!6.20e-14!239;DOID:0060085!7.98e-10!1;DOID:3165!7.98e-10!1;DOID:0060121!7.98e-10!1;DOID:2438!7.98e-10!1;DOID:4418!7.98e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.06e-61;8!DOID:8692;1.46e-51;31!DOID:1240;3.27e-33;39!DOID:2531;1.09e-26;51!DOID:0060083;1.09e-26;51!DOID:0060085;1.53e-21;1!DOID:3165;1.53e-21;1!DOID:0060121;1.53e-21;1!DOID:2438;1.53e-21;1!DOID:4418;1.53e-21;1!DOID:200;1.82e-11;2!DOID:4305;1.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.75e-61,8;DOID:8692,5.84e-51,31;DOID:1240,1.76e-40,39;DOID:2531,2.84e-38,51;DOID:0060083,2.84e-38,51;DOID:0060085,1.53e-21,1;DOID:3165,1.53e-21,1;DOID:0060121,1.53e-21,1;DOID:2438,1.53e-21,1;DOID:4418,1.53e-21,1;DOID:0050686,6.15e-14,137;DOID:200,1.82e-11,2;DOID:4305,1.82e-11,2;DOID:162,6.25e-08,235;DOID:14566,9.40e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001282!3.00e-09!1;UBERON:0009842!3.00e-09!1;UBERON:0003704!3.00e-09!1;UBERON:0001171!3.00e-09!1;UBERON:0001172!3.00e-09!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,1.94773164164733,0,0.456469358066384,0,0,0,0.1605880751037,0,0,0,2.76516687877612,2.90778940260141,2.50273712567863,0.781552381608161,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0.627921025580099,0,2.03036094555463,2.15668787749514,2.85296697858933,2.08729105996604,0.635746315921515,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16015296279268,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67927368271232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:68596984..68596998,- | |||
}} |
Revision as of 21:38, 13 September 2013
Short description: | p@chr6:68596984..68596998, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:68596984..68596998, - |
Coexpression cluster: | C510_fibrous_mesothelioma_cholangiocellular_liposarcoma_Fibroblast_mesenchymal_leukemia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.38e-18 | 108 |
common myeloid progenitor | 9.38e-18 | 108 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
bone matrix secreting cell | 1.82e-11 | 2 |
osteocyte | 1.82e-11 | 2 |
osteoclast | 1.82e-11 | 2 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.75e-61 | 8 |
myeloid leukemia | 5.84e-51 | 31 |
leukemia | 1.76e-40 | 39 |
hematologic cancer | 2.84e-38 | 51 |
immune system cancer | 2.84e-38 | 51 |
organ system benign neoplasm | 1.53e-21 | 1 |
skin benign neoplasm | 1.53e-21 | 1 |
integumentary system benign neoplasm | 1.53e-21 | 1 |
dermis tumor | 1.53e-21 | 1 |
cutaneous fibrous histiocytoma | 1.53e-21 | 1 |
organ system cancer | 6.15e-14 | 137 |
giant cell tumor | 1.82e-11 | 2 |
bone giant cell tumor | 1.82e-11 | 2 |
cancer | 6.25e-08 | 235 |
disease of cellular proliferation | 9.40e-08 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.