FFCP PHASE1:Mm9::chr2:11093809..11093826,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18761|HGNC=|MCL_coexpression_id=33|UniProt=B1AYX8|association_with_transcript=69bp_to_ENSMUST00000114853_5end|description=CAGE_peak_6_at_Prkcq_5end|id=chr2:11093809..11093826,+|ontology_enrichment_celltype=CL:0000791!2.99e-07!9;CL:0000789!2.99e-07!9;CL:0002420!2.99e-07!9;CL:0002419!2.99e-07!9;CL:0000790!2.99e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,2.80e-14,9;CL:0000789,2.80e-14,9;CL:0002420,2.80e-14,9;CL:0002419,2.80e-14,9;CL:0000790,2.80e-14,9;CL:0000624,1.14e-12,8;CL:0000084,2.87e-11,11;CL:0000827,2.87e-11,11;CL:0000838,3.83e-10,12;CL:0000893,1.80e-09,6;CL:0002489,1.80e-09,6;CL:0000898,1.80e-09,6;CL:0000809,1.80e-09,6;CL:0000810,1.80e-09,6;CL:0000895,1.80e-09,6;CL:0000808,1.80e-09,6;CL:0000894,1.80e-09,6;CL:0000806,1.80e-09,6;CL:0000807,1.80e-09,6;CL:0000805,1.80e-09,6;CL:0002425,1.80e-09,6;CL:0002436,1.80e-09,6;CL:0002427,1.80e-09,6;CL:0002428,1.80e-09,6;CL:0002429,1.80e-09,6;CL:0002433,1.80e-09,6;CL:0002431,1.80e-09,6;CL:0002432,1.80e-09,6;CL:0000542,3.42e-09,13;CL:0000051,3.42e-09,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006562!2.59e-11!24;UBERON:0001557!2.59e-11!24;UBERON:0001042!2.59e-11!24;UBERON:0008814!2.59e-11!24;UBERON:0009145!2.59e-11!24;UBERON:0002370!6.86e-11!23;UBERON:0000974!6.86e-11!23;UBERON:0004807!6.86e-11!23;UBERON:0005058!6.86e-11!23;UBERON:0003351!6.86e-11!23;UBERON:0009113!6.86e-11!23;UBERON:0003295!6.86e-11!23;UBERON:0009722!6.86e-11!23;UBERON:0005562!6.86e-11!23;UBERON:0007690!6.86e-11!23;UBERON:0004177!7.24e-11!29;UBERON:0003408!6.47e-10!24;UBERON:0000072!1.21e-08!27;UBERON:0007811!1.75e-08!86;UBERON:0000063!1.95e-08!35;UBERON:0000153!1.99e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0006562,1.15e-26,24;UBERON:0001557,1.15e-26,24;UBERON:0001042,1.15e-26,24;UBERON:0008814,1.15e-26,24;UBERON:0009145,1.15e-26,24;UBERON:0002370,1.03e-25,23;UBERON:0000974,1.03e-25,23;UBERON:0004807,1.03e-25,23;UBERON:0005058,1.03e-25,23;UBERON:0003351,1.03e-25,23;UBERON:0009113,1.03e-25,23;UBERON:0003295,1.03e-25,23;UBERON:0009722,1.03e-25,23;UBERON:0005562,1.03e-25,23;UBERON:0007690,1.03e-25,23;UBERON:0003408,2.25e-24,24;UBERON:0000072,5.84e-23,27;UBERON:0004177,5.63e-21,29;UBERON:0005057,5.63e-21,29;UBERON:0007811,6.21e-19,36;UBERON:0000077,4.02e-18,35;UBERON:0000153,1.02e-14,43;UBERON:0000065,3.86e-14,41;UBERON:0001004,1.20e-13,42;UBERON:0002193,2.31e-11,48;UBERON:0002405,2.31e-11,48;UBERON:0002390,2.90e-11,45;UBERON:0003061,2.90e-11,45;UBERON:0003929,2.78e-08,55;UBERON:0002368,4.02e-07,60;UBERON:0000490,9.94e-07,66|phase1_expression=0.80074423552397,0,0,0,0,0,0,5.03580961422147,1.68946466582,2.34064526321993,1.36974374580404,1.51567102091139,6.84802919724823,4.37102012094987,0.333109761815663,0.202475267389826,0,0.315462165358238,0.411343300817216,0.42438965179803,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.279972843250725,0,0,5.80289713609076,5.04140698713696,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0,0.856952953211411,1.32521124570968,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.893811366596314,1.22885226604995,0,0.182975287204819,0,0.837548997004143,0,1.5279824777681,1.17851434189467,1.56608848879013,0.931997229126503,0.227178579999552,0.226714680320357,2.02905142091174,0,0,0,0,0,1.40444420131752,0,0,0,1.54927761754349,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.251333182659351,0,0,0,0.970601099684455,0.441683036920787,0.969750506270444,0,0.292780797011547,0.209446706813455,0.766371165625774,0.239630249011841,0,0,0.898743836428936,1.83000241127451,0.502617408451458,0.521472960576829,0.255715457330331,1.66230435647648,1.29793010454206,0,0.497627882440372,0,0.631325567659422,0.130120442962704,0,0.180062129805349,0.150704817835715,0.272145996605311,0.384341160854549,0.468508622798644,1.29351685369508,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.233530684734339,0.493679549740441,0.164167464079095,0.405344047729279,0.146199987425332,0.439100230582101,0,1.89260953707715,0.617427674275707,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0.754005626400808,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.280543279561274,0.379419222745544,0.295220295959204,0.470996183524124,0.493588655687202,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0.575392274901621,0.324270453550071,0.549122826376163,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0.664394068946325,0.797273843287435,0.163863314715738,0.863424909329478,1.01254341007058,0,0,0.491764273019036,0.275936746304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| ||
|EntrezGene=18761 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|UniProt=B1AYX8 | |||
|association_with_transcript=69bp_to_ENSMUST00000114853_5end | |||
|description=CAGE_peak_6_at_Prkcq_5end | |||
|id=chr2:11093809..11093826,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.99e-07!9;CL:0000789!2.99e-07!9;CL:0002420!2.99e-07!9;CL:0002419!2.99e-07!9;CL:0000790!2.99e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.80e-14,9;CL:0000789,2.80e-14,9;CL:0002420,2.80e-14,9;CL:0002419,2.80e-14,9;CL:0000790,2.80e-14,9;CL:0000624,1.14e-12,8;CL:0000084,2.87e-11,11;CL:0000827,2.87e-11,11;CL:0000838,3.83e-10,12;CL:0000893,1.80e-09,6;CL:0002489,1.80e-09,6;CL:0000898,1.80e-09,6;CL:0000809,1.80e-09,6;CL:0000810,1.80e-09,6;CL:0000895,1.80e-09,6;CL:0000808,1.80e-09,6;CL:0000894,1.80e-09,6;CL:0000806,1.80e-09,6;CL:0000807,1.80e-09,6;CL:0000805,1.80e-09,6;CL:0002425,1.80e-09,6;CL:0002436,1.80e-09,6;CL:0002427,1.80e-09,6;CL:0002428,1.80e-09,6;CL:0002429,1.80e-09,6;CL:0002433,1.80e-09,6;CL:0002431,1.80e-09,6;CL:0002432,1.80e-09,6;CL:0000542,3.42e-09,13;CL:0000051,3.42e-09,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!2.59e-11!24;UBERON:0001557!2.59e-11!24;UBERON:0001042!2.59e-11!24;UBERON:0008814!2.59e-11!24;UBERON:0009145!2.59e-11!24;UBERON:0002370!6.86e-11!23;UBERON:0000974!6.86e-11!23;UBERON:0004807!6.86e-11!23;UBERON:0005058!6.86e-11!23;UBERON:0003351!6.86e-11!23;UBERON:0009113!6.86e-11!23;UBERON:0003295!6.86e-11!23;UBERON:0009722!6.86e-11!23;UBERON:0005562!6.86e-11!23;UBERON:0007690!6.86e-11!23;UBERON:0004177!7.24e-11!29;UBERON:0003408!6.47e-10!24;UBERON:0000072!1.21e-08!27;UBERON:0007811!1.75e-08!86;UBERON:0000063!1.95e-08!35;UBERON:0000153!1.99e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006562,1.15e-26,24;UBERON:0001557,1.15e-26,24;UBERON:0001042,1.15e-26,24;UBERON:0008814,1.15e-26,24;UBERON:0009145,1.15e-26,24;UBERON:0002370,1.03e-25,23;UBERON:0000974,1.03e-25,23;UBERON:0004807,1.03e-25,23;UBERON:0005058,1.03e-25,23;UBERON:0003351,1.03e-25,23;UBERON:0009113,1.03e-25,23;UBERON:0003295,1.03e-25,23;UBERON:0009722,1.03e-25,23;UBERON:0005562,1.03e-25,23;UBERON:0007690,1.03e-25,23;UBERON:0003408,2.25e-24,24;UBERON:0000072,5.84e-23,27;UBERON:0004177,5.63e-21,29;UBERON:0005057,5.63e-21,29;UBERON:0007811,6.21e-19,36;UBERON:0000077,4.02e-18,35;UBERON:0000153,1.02e-14,43;UBERON:0000065,3.86e-14,41;UBERON:0001004,1.20e-13,42;UBERON:0002193,2.31e-11,48;UBERON:0002405,2.31e-11,48;UBERON:0002390,2.90e-11,45;UBERON:0003061,2.90e-11,45;UBERON:0003929,2.78e-08,55;UBERON:0002368,4.02e-07,60;UBERON:0000490,9.94e-07,66 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,5.03580961422147,1.68946466582,2.34064526321993,1.36974374580404,1.51567102091139,6.84802919724823,4.37102012094987,0.333109761815663,0.202475267389826,0,0.315462165358238,0.411343300817216,0.42438965179803,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.279972843250725,0,0,5.80289713609076,5.04140698713696,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0,0.856952953211411,1.32521124570968,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.893811366596314,1.22885226604995,0,0.182975287204819,0,0.837548997004143,0,1.5279824777681,1.17851434189467,1.56608848879013,0.931997229126503,0.227178579999552,0.226714680320357,2.02905142091174,0,0,0,0,0,1.40444420131752,0,0,0,1.54927761754349,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.251333182659351,0,0,0,0.970601099684455,0.441683036920787,0.969750506270444,0,0.292780797011547,0.209446706813455,0.766371165625774,0.239630249011841,0,0,0.898743836428936,1.83000241127451,0.502617408451458,0.521472960576829,0.255715457330331,1.66230435647648,1.29793010454206,0,0.497627882440372,0,0.631325567659422,0.130120442962704,0,0.180062129805349,0.150704817835715,0.272145996605311,0.384341160854549,0.468508622798644,1.29351685369508,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.233530684734339,0.493679549740441,0.164167464079095,0.405344047729279,0.146199987425332,0.439100230582101,0,1.89260953707715,0.617427674275707,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0.754005626400808,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.280543279561274,0.379419222745544,0.295220295959204,0.470996183524124,0.493588655687202,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0.575392274901621,0.324270453550071,0.549122826376163,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0.664394068946325,0.797273843287435,0.163863314715738,0.863424909329478,1.01254341007058,0,0,0.491764273019036,0.275936746304732,1.76605648986571,1.99259867206745,0,1.00988370881749,0.315508219416257,0,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0.642642632843614,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0.680879211507576,0,0,0,0.532020700926821,0,0.164549020602121,0,0,0,0.661585194164886,1.81374878235628,0.161464426695906,0.301564624640779,0.477489376012546,0.164140899745061,0.291480836629851,2.22510362412612,1.19609616558497,0.206386867963223,0.370389054739423,0.188368457004691,0.410082683163076,0.686334519619568,1.35982743995084,1.11961161858926,0.967399816630967,0.954670618015114,0.158167996790568,0,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.330613822901344,0.26175594198403,0,0,0,0,0.330916980914195,0,0.387479470433193,0,0.469428954583016,0.2604087696879,0.104859344425711,0,0.288030006257865,4.74016680942267,1.82452693761148,2.87590680061516,2.5984164595559,3.22248052201467,2.18549490259391,4.68762253127878,4.13530676088816,3.93769154797776,3.81034033274999,4.33552596088414,4.19068887180935,4.52195655709548,7.01261413089414,1.13365191807606,0,0,0,0.772758376128762,0.187682475451182,0.183151624267265,0,0,0.564751842617067,1.38097570952153,0,1.03111909406213,0,0,0,0.45032120322422,0,1.55328093525546,0,0,0,0.972426868273176,0.209613162627982,1.10306105070008,1.11123363900808,1.23621034343337,0.64183841918363,1.26348605881899,0.760437899670719,1.13175804831646,0.749132059759059,0.448176066834085,0.976402972245426,0.476293691283074,0.927074607558844,0.578727661391115,0,1.03039244094078,0.342869252385415,0.532427418478012,0.953744759789284,0.145346416632329,0.470546902076653,0.930760686808441,0.182927972872773,0.789209134313529,1.35804113845862,0.561142271657738,0.949080144993393,1.18205378850676,0.409231043169689,0.619747364743864,1.15743966588685,0.999242311751784,0.233931608445408,0.859484216193193,1.53030665655075,1.76473135295612,1.15933917810211 | |||
|short_description=p6@Prkcq | |||
}} |
Revision as of 21:36, 13 September 2013
Short description: | p6@Prkcq |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Prkcq_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 69bp_to_ENSMUST00000114853_5end |
EntrezGene: | Prkcq |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pharynx | 1.15e-26 | 24 |
upper respiratory tract | 1.15e-26 | 24 |
chordate pharynx | 1.15e-26 | 24 |
pharyngeal arch system | 1.15e-26 | 24 |
pharyngeal region of foregut | 1.15e-26 | 24 |
thymus | 1.03e-25 | 23 |
neck | 1.03e-25 | 23 |
respiratory system epithelium | 1.03e-25 | 23 |
hemolymphoid system gland | 1.03e-25 | 23 |
pharyngeal epithelium | 1.03e-25 | 23 |
thymic region | 1.03e-25 | 23 |
pharyngeal gland | 1.03e-25 | 23 |
entire pharyngeal arch endoderm | 1.03e-25 | 23 |
thymus primordium | 1.03e-25 | 23 |
early pharyngeal endoderm | 1.03e-25 | 23 |
gland of gut | 2.25e-24 | 24 |
segment of respiratory tract | 5.84e-23 | 27 |
hemopoietic organ | 5.63e-21 | 29 |
immune organ | 5.63e-21 | 29 |
craniocervical region | 6.21e-19 | 36 |
mixed endoderm/mesoderm-derived structure | 4.02e-18 | 35 |
anterior region of body | 1.02e-14 | 43 |
respiratory tract | 3.86e-14 | 41 |
respiratory system | 1.20e-13 | 42 |
hemolymphoid system | 2.31e-11 | 48 |
immune system | 2.31e-11 | 48 |
hematopoietic system | 2.90e-11 | 45 |
blood island | 2.90e-11 | 45 |
gut epithelium | 2.78e-08 | 55 |
endocrine gland | 4.02e-07 | 60 |
unilaminar epithelium | 9.94e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.