FFCP PHASE1:Mm9::chr1:90303531..90303540,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=75396|HGNC=|MCL_coexpression_id=11|UniProt=Q8K1I3|association_with_transcript=0bp_to_ENSMUST00000027518_5end|description=CAGE_peak_2_at_Spp2_5end|id=chr1:90303531..90303540,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000057,8.42e-10,1;CL:0000632,8.42e-10,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!1.96e-16!49;UBERON:0005173!1.96e-16!49;UBERON:0002417!1.96e-16!49;UBERON:0000916!1.96e-16!49;UBERON:0002107!2.94e-11!22;UBERON:0007499!2.94e-11!22;UBERON:0006925!2.94e-11!22;UBERON:0009497!2.94e-11!22;UBERON:0000015!2.94e-11!22;UBERON:0002423!2.94e-11!22;UBERON:0006235!2.94e-11!22;UBERON:0008835!2.94e-11!22;UBERON:0003894!2.94e-11!22;UBERON:0004161!2.94e-11!22;UBERON:0008836!2.94e-11!22;UBERON:0009569!9.48e-11!66;UBERON:0009854!1.19e-10!23;UBERON:0009856!1.19e-10!23;UBERON:0002113!9.85e-10!14;UBERON:0003918!9.85e-10!14;UBERON:0005095!9.85e-10!14;UBERON:0007687!9.85e-10!14;UBERON:0002365!1.40e-09!25;UBERON:0002330!1.40e-09!25;UBERON:0006554!2.61e-08!16;UBERON:0001008!1.00e-07!17;UBERON:0005177!3.80e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0002113,7.13e-31,14;UBERON:0003918,7.13e-31,14;UBERON:0011143,7.13e-31,14;UBERON:0005095,7.13e-31,14;UBERON:0007687,7.13e-31,14;UBERON:0006554,5.40e-24,18;UBERON:0001008,1.00e-22,19;UBERON:0000489,1.51e-20,21;UBERON:0005172,3.26e-11,49;UBERON:0005173,3.26e-11,49;UBERON:0002417,3.26e-11,49;UBERON:0000916,3.26e-11,49;UBERON:0003103,6.53e-10,43;UBERON:0003104,6.41e-09,61;UBERON:0009142,6.41e-09,61;UBERON:0009569,3.31e-08,66;UBERON:0005177,9.05e-07,79|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0.346970653532272,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570676878337677,0,0.988193728344065,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0,0.456994050438915,0,3.86937522906097,5.04276466635827,5.40045813155453,21.6901322336203,16.679946721695,14.4438829614065,17.5223972768957,0,0.333690211432188,0,0.449724224769707,0.202860121388503,0,0.50925170356284,0.287696137450811,0.324270453550071,0.823684239564244,0,0.372140947668503,0.624075346229121,0.505157755894224,0.896987067609561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.565879024158229,0,0.192075457214608,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0,0.70990322463735,0.238436189947321,0,0.188218760830661,0,0.182927972872773,0,0,0,0.355905054372522,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p2@Spp2}} | ||
|EntrezGene=75396 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|UniProt=Q8K1I3 | |||
|association_with_transcript=0bp_to_ENSMUST00000027518_5end | |||
|description=CAGE_peak_2_at_Spp2_5end | |||
|id=chr1:90303531..90303540,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.42e-10,1;CL:0000632,8.42e-10,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.96e-16!49;UBERON:0005173!1.96e-16!49;UBERON:0002417!1.96e-16!49;UBERON:0000916!1.96e-16!49;UBERON:0002107!2.94e-11!22;UBERON:0007499!2.94e-11!22;UBERON:0006925!2.94e-11!22;UBERON:0009497!2.94e-11!22;UBERON:0000015!2.94e-11!22;UBERON:0002423!2.94e-11!22;UBERON:0006235!2.94e-11!22;UBERON:0008835!2.94e-11!22;UBERON:0003894!2.94e-11!22;UBERON:0004161!2.94e-11!22;UBERON:0008836!2.94e-11!22;UBERON:0009569!9.48e-11!66;UBERON:0009854!1.19e-10!23;UBERON:0009856!1.19e-10!23;UBERON:0002113!9.85e-10!14;UBERON:0003918!9.85e-10!14;UBERON:0005095!9.85e-10!14;UBERON:0007687!9.85e-10!14;UBERON:0002365!1.40e-09!25;UBERON:0002330!1.40e-09!25;UBERON:0006554!2.61e-08!16;UBERON:0001008!1.00e-07!17;UBERON:0005177!3.80e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,7.13e-31,14;UBERON:0003918,7.13e-31,14;UBERON:0011143,7.13e-31,14;UBERON:0005095,7.13e-31,14;UBERON:0007687,7.13e-31,14;UBERON:0006554,5.40e-24,18;UBERON:0001008,1.00e-22,19;UBERON:0000489,1.51e-20,21;UBERON:0005172,3.26e-11,49;UBERON:0005173,3.26e-11,49;UBERON:0002417,3.26e-11,49;UBERON:0000916,3.26e-11,49;UBERON:0003103,6.53e-10,43;UBERON:0003104,6.41e-09,61;UBERON:0009142,6.41e-09,61;UBERON:0009569,3.31e-08,66;UBERON:0005177,9.05e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0.346970653532272,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570676878337677,0,0.988193728344065,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0,0.456994050438915,0,3.86937522906097,5.04276466635827,5.40045813155453,21.6901322336203,16.679946721695,14.4438829614065,17.5223972768957,0,0.333690211432188,0,0.449724224769707,0.202860121388503,0,0.50925170356284,0.287696137450811,0.324270453550071,0.823684239564244,0,0.372140947668503,0.624075346229121,0.505157755894224,0.896987067609561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.565879024158229,0,0.192075457214608,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0,0.70990322463735,0.238436189947321,0,0.188218760830661,0,0.182927972872773,0,0,0,0.355905054372522,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p2@Spp2 | |||
}} |
Revision as of 21:13, 13 September 2013
Short description: | p2@Spp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Spp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000027518_5end |
EntrezGene: | Spp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.42e-10 | 1 |
hepatic stellate cell | 8.42e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
kidney | 7.13e-31 | 14 |
kidney mesenchyme | 7.13e-31 | 14 |
upper urinary tract | 7.13e-31 | 14 |
kidney rudiment | 7.13e-31 | 14 |
kidney field | 7.13e-31 | 14 |
urinary system structure | 5.40e-24 | 18 |
renal system | 1.00e-22 | 19 |
cavitated compound organ | 1.51e-20 | 21 |
abdomen element | 3.26e-11 | 49 |
abdominal segment element | 3.26e-11 | 49 |
abdominal segment of trunk | 3.26e-11 | 49 |
abdomen | 3.26e-11 | 49 |
compound organ | 6.53e-10 | 43 |
mesenchyme | 6.41e-09 | 61 |
entire embryonic mesenchyme | 6.41e-09 | 61 |
subdivision of trunk | 3.31e-08 | 66 |
trunk region element | 9.05e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.