FFCP PHASE1:Mm9::chr1:82765024..82765040,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=66261|HGNC=|MCL_coexpression_id=12|UniProt=Q9CQY8|association_with_transcript=0bp_to_ENSMUST00000027331,ENSMUST00000138787,NM_025453,uc007bsd.1_5end|description=CAGE_peak_1_at_Tm4sf20_5end|id=chr1:82765024..82765040,-|ontology_enrichment_celltype=CL:0002563!4.19e-09!9;CL:0002251!4.19e-09!9;CL:0000239!9.43e-07!6;CL:0000677!9.43e-07!6;CL:0000212!9.43e-07!6;CL:0000584!9.43e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,5.47e-11,9;CL:0002251,5.47e-11,9;CL:0000239,4.69e-08,6;CL:0000677,4.69e-08,6;CL:0000584,4.69e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.81e-20!43;UBERON:0005409!2.37e-19!59;UBERON:0000344!6.13e-15!15;UBERON:0001242!7.26e-13!13;UBERON:0000060!7.26e-13!13;UBERON:0001262!7.26e-13!13;UBERON:0004786!7.26e-13!13;UBERON:0003350!4.19e-09!9;UBERON:0004808!4.19e-09!9;UBERON:0001277!4.19e-09!9;UBERON:0001007!6.74e-08!128;UBERON:0001555!6.74e-08!128;UBERON:0007026!6.74e-08!128;UBERON:0004119!1.58e-07!130;UBERON:0000925!1.58e-07!130;UBERON:0006595!1.58e-07!130;UBERON:0004923!3.72e-07!24;UBERON:0004921!6.53e-07!126;UBERON:0004185!6.53e-07!126;UBERON:0000485!6.83e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.27e-32,31;UBERON:0005409,1.20e-29,47;UBERON:0000344,2.79e-18,15;UBERON:0001242,1.09e-15,13;UBERON:0001262,1.09e-15,13;UBERON:0004786,1.09e-15,13;UBERON:0003350,5.47e-11,9;UBERON:0004808,5.47e-11,9;UBERON:0001277,5.47e-11,9;UBERON:0004923,1.65e-09,24;UBERON:0000485,1.60e-08,11|phase1_expression=0,1051.46290321739,1050.13824451105,325.149027154842,408.730915636219,257.191044569015,228.473162502424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1118.82701259429,1385.17323908357,1014.66788059124,968.783729361759,929.758369039611,565.889743141081,262.615395209848,792.243114571404,0,0,0,258.811051297142,258.162404241739,255.824203396748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.3919938732015,0,0,0,0,0,0,0,0,0,0,115.668270155408,3.36619248741323,0,0.693941307064543,0,0.461230994512117,0,0,1.0053327306374,0,0,0,0,0,0,376.511357660607,0,0,535.948901827625,0,0,0,0,0,0,0,0,0,0,1.42575109390443,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2831.35855138816,1236.8353002854,0.853153002140936,5.34144345279009,47.6809606891745,146.62392240117,169.452069409791,254.521887738604,381.521365481787,398.077373567934,442.852637906075,477.694489370803,367.702268306661,388.289984538624,375.647930682219,508.805953164908,2.0863469104839,1.25673363870702,0,0.203651327845314,0,0.210407459670956,0.126473074248515,0.147610147979602,0,0,0.592905254174298,0,0,0,0,0.241177159752417,0.763877555344259,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0,0,0.325929952884052,0.169745085775188,0,0,0,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,3.32555912661226,0.565815239267694,0,0,122.236582668569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31312719796049,347.736638099412,0.18542530201051,0,0,0,0,0,0,0,0,0,3.81868247206045,0,4.06638934253697,24.8412283890143,5.64538399239065,24.4566071395719,2.29269388854195,8.92657321833628,0,221.900834275549,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0.295379054349154,0.100966449948148,0,0.100826185136841,0.292373642219257,0.192423683280659,0,0,0,0,0,0,0.750729901804728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,2.18796045361465,0,3.49302666055027,10.6678429344775,8.03536723231687,10.5903339165299,9.34979683526051,9.37873409593887,8.86543804514558,9.64507526939789,9.09157164149144,10.4532553499216,9.52587382566147,9.15486174964358,7.13764115715709,7.41754621445952,9.42073088860143,10.2860775715625,8.5188386956482,10.0143199777875,11.3370204973216,9.59915680236372,7.86915853392591,8.78054269789308,11.3119975918272,9.50628796921032,6.17256498823512,7.59264115994714,8.66839444904958,9.00308294973317,7.90177890048427,8.10207766120794,0,14.5037597236153,24.2804291074577,0.956441660344217,0.441182838239031,0|short_description=p1@Tm4sf20}} | ||
|EntrezGene=66261 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q9CQY8 | |||
|association_with_transcript=0bp_to_ENSMUST00000027331,ENSMUST00000138787,NM_025453,uc007bsd.1_5end | |||
|description=CAGE_peak_1_at_Tm4sf20_5end | |||
|id=chr1:82765024..82765040,- | |||
|ontology_enrichment_celltype=CL:0002563!4.19e-09!9;CL:0002251!4.19e-09!9;CL:0000239!9.43e-07!6;CL:0000677!9.43e-07!6;CL:0000212!9.43e-07!6;CL:0000584!9.43e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.47e-11,9;CL:0002251,5.47e-11,9;CL:0000239,4.69e-08,6;CL:0000677,4.69e-08,6;CL:0000584,4.69e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.81e-20!43;UBERON:0005409!2.37e-19!59;UBERON:0000344!6.13e-15!15;UBERON:0001242!7.26e-13!13;UBERON:0000060!7.26e-13!13;UBERON:0001262!7.26e-13!13;UBERON:0004786!7.26e-13!13;UBERON:0003350!4.19e-09!9;UBERON:0004808!4.19e-09!9;UBERON:0001277!4.19e-09!9;UBERON:0001007!6.74e-08!128;UBERON:0001555!6.74e-08!128;UBERON:0007026!6.74e-08!128;UBERON:0004119!1.58e-07!130;UBERON:0000925!1.58e-07!130;UBERON:0006595!1.58e-07!130;UBERON:0004923!3.72e-07!24;UBERON:0004921!6.53e-07!126;UBERON:0004185!6.53e-07!126;UBERON:0000485!6.83e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.27e-32,31;UBERON:0005409,1.20e-29,47;UBERON:0000344,2.79e-18,15;UBERON:0001242,1.09e-15,13;UBERON:0001262,1.09e-15,13;UBERON:0004786,1.09e-15,13;UBERON:0003350,5.47e-11,9;UBERON:0004808,5.47e-11,9;UBERON:0001277,5.47e-11,9;UBERON:0004923,1.65e-09,24;UBERON:0000485,1.60e-08,11 | |||
|phase1_expression=0,1051.46290321739,1050.13824451105,325.149027154842,408.730915636219,257.191044569015,228.473162502424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1118.82701259429,1385.17323908357,1014.66788059124,968.783729361759,929.758369039611,565.889743141081,262.615395209848,792.243114571404,0,0,0,258.811051297142,258.162404241739,255.824203396748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.3919938732015,0,0,0,0,0,0,0,0,0,0,115.668270155408,3.36619248741323,0,0.693941307064543,0,0.461230994512117,0,0,1.0053327306374,0,0,0,0,0,0,376.511357660607,0,0,535.948901827625,0,0,0,0,0,0,0,0,0,0,1.42575109390443,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2831.35855138816,1236.8353002854,0.853153002140936,5.34144345279009,47.6809606891745,146.62392240117,169.452069409791,254.521887738604,381.521365481787,398.077373567934,442.852637906075,477.694489370803,367.702268306661,388.289984538624,375.647930682219,508.805953164908,2.0863469104839,1.25673363870702,0,0.203651327845314,0,0.210407459670956,0.126473074248515,0.147610147979602,0,0,0.592905254174298,0,0,0,0,0.241177159752417,0.763877555344259,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0,0,0.325929952884052,0.169745085775188,0,0,0,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,3.32555912661226,0.565815239267694,0,0,122.236582668569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31312719796049,347.736638099412,0.18542530201051,0,0,0,0,0,0,0,0,0,3.81868247206045,0,4.06638934253697,24.8412283890143,5.64538399239065,24.4566071395719,2.29269388854195,8.92657321833628,0,221.900834275549,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0.295379054349154,0.100966449948148,0,0.100826185136841,0.292373642219257,0.192423683280659,0,0,0,0,0,0,0.750729901804728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,2.18796045361465,0,3.49302666055027,10.6678429344775,8.03536723231687,10.5903339165299,9.34979683526051,9.37873409593887,8.86543804514558,9.64507526939789,9.09157164149144,10.4532553499216,9.52587382566147,9.15486174964358,7.13764115715709,7.41754621445952,9.42073088860143,10.2860775715625,8.5188386956482,10.0143199777875,11.3370204973216,9.59915680236372,7.86915853392591,8.78054269789308,11.3119975918272,9.50628796921032,6.17256498823512,7.59264115994714,8.66839444904958,9.00308294973317,7.90177890048427,8.10207766120794,0,14.5037597236153,24.2804291074577,0.956441660344217,0.441182838239031,0 | |||
|short_description=p1@Tm4sf20 | |||
}} |
Revision as of 21:04, 13 September 2013
Short description: | p1@Tm4sf20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tm4sf20_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000027331, ENSMUST00000138787, NM_025453, uc007bsd.1_5end |
EntrezGene: | Tm4sf20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.47e-11 | 9 |
epithelial cell of alimentary canal | 5.47e-11 | 9 |
brush border epithelial cell | 4.69e-08 | 6 |
gut absorptive cell | 4.69e-08 | 6 |
enterocyte | 4.69e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.27e-32 | 31 |
gastrointestinal system | 1.20e-29 | 47 |
mucosa | 2.79e-18 | 15 |
intestinal mucosa | 1.09e-15 | 13 |
wall of intestine | 1.09e-15 | 13 |
gastrointestinal system mucosa | 1.09e-15 | 13 |
epithelium of mucosa | 5.47e-11 | 9 |
gastrointestinal system epithelium | 5.47e-11 | 9 |
intestinal epithelium | 5.47e-11 | 9 |
organ component layer | 1.65e-09 | 24 |
simple columnar epithelium | 1.60e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.