FFCP PHASE1:Mm9::chr1:183764684..183764700,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=82|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:183764684..183764700,-|id=chr1:183764684..183764700,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.73e-11,3;DOID:4045,2.73e-11,3|ontology_enrichment_uberon=UBERON:0005057!6.36e-09!51;UBERON:0001048!7.75e-08!147;UBERON:0001041!3.29e-07!92;UBERON:0004177!8.55e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.74e-12,29;UBERON:0005057,3.74e-12,29;UBERON:0000077,1.01e-09,35;UBERON:0002106,1.33e-09,6;UBERON:0004457,1.33e-09,6;UBERON:0000042,1.33e-09,6;UBERON:0004854,1.33e-09,6;UBERON:0009034,1.33e-09,6;UBERON:0002095,1.33e-09,6;UBERON:0004782,1.33e-09,6;UBERON:0003281,1.33e-09,6;UBERON:0009664,1.33e-09,6;UBERON:0002296,1.33e-09,6;UBERON:0005602,1.33e-09,6;UBERON:0001179,1.33e-09,6;UBERON:0006293,1.33e-09,6;UBERON:0002390,1.76e-08,45;UBERON:0003061,1.76e-08,45;UBERON:0002193,8.21e-08,48;UBERON:0002405,8.21e-08,48;UBERON:0002075,8.90e-08,19;UBERON:0001041,9.83e-08,80|phase1_expression=0,0,0,0,0,0,0,0,0.703943610758334,0.234064526321993,0,0,0.171200729931206,0.34968160967599,0.333109761815663,1.01237633694913,0,0.157731082679119,0.274228867211478,0,0,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0.204169356262369,2.51118978442145,1.5626706890476,2.61761871986899,1.17646297606203,3.41522742479223,0.971020706062307,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.883885756421003,0.284743361598206,0,0,0,0.289864488701678,2.58127163094416,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0,0.505524445014783,0.11418387971906,0.517875767294343,0.148442139064825,0,0.304465478312141,0,0.301445281105245,0.352766121407114,0.125666591329675,0.247194967734374,0,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0,0.209446706813455,0.510914110417183,0.359445373517761,0,0.381210681219194,0.449371918214468,0,0.251308704225729,0.173824320192276,0.511430914660661,0,0.324482526135515,0,0.248813941220186,0,0.420883711772948,0.780722657776222,0.229902104433473,0,0.30140963567143,0.340182495756639,0.384341160854549,0.0937017245597288,0.776110112217047,0,0,0,0.43839146485515,0.556094498451196,0.348252166522167,0.411564272815887,0.398068533636986,0,0.257347907114715,0.284163499395593,0,0.469052119962192,0.36012412292203,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,0,0.205809224758569,0,0,0,0.232236671860439,0.257734922644187,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0.19496408711912,1.79763881730844,1.08069024937347,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.500535317148282,0.589676985339609,0.224862112384854,0.608580364165509,0.482354319504834,0.50925170356284,0.287696137450811,1.62135226775035,0.823684239564244,11.5014565221884,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.184753190166605,0.189491411770485,0,0.339490171550376,0.234690248288502,0,0,0,0.472905432318573,1.10732344824387,0.797273843287435,1.3109065177259,0.345369963731791,0.578596234326046,0,0.54390568381871,0.491764273019036,0,0,0.234423373184406,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0.534196811001766,0.162886959353576,0.494910368917606,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0,0,1.09060118843252,0,1.26414703174326,0,1.03135543248187,0.340439605753788,0.36012218806262,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.322928853391811,0.422190474497091,0.238744688006273,0.328281799490123,0,0.370850604021019,1.36696704638282,0.206386867963223,0.925972636848558,3.57900068308913,1.91371918809435,1.83022538565218,0.679913719975421,0.559805809294632,0.276399947608848,0.954670618015114,0,0,0.324016022465404,0,0.218362563746178,0.134864346384821,0.330613822901344,0,0,0,0.56369293868419,0.448549638131936,0,0.388902376688095,0.129159823477731,0.506868376472335,0.352071715937262,0.651021924219751,0.209718688851422,0,0.288030006257865,0.948033361884535,0.202725215290164,0.513554785824136,0.25984164595559,0.716106782669926,0.198681354781265,1.08175904567972,1.77227432609493,1.11063094942962,0.838274873204998,2.41982844328417,2.14407337627455,1.25075394132428,1.28564592399726,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0.515559547031063,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.754505365544305,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.25384382367503,0,0,0.271608227691724,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0,0,0.249810577937946,0,0,0.382576664137687,0,0.231867835620421|short_description=p@chr1:183764684..183764700,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=82 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:183764684..183764700,- | |||
|id=chr1:183764684..183764700,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.73e-11,3;DOID:4045,2.73e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0005057!6.36e-09!51;UBERON:0001048!7.75e-08!147;UBERON:0001041!3.29e-07!92;UBERON:0004177!8.55e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.74e-12,29;UBERON:0005057,3.74e-12,29;UBERON:0000077,1.01e-09,35;UBERON:0002106,1.33e-09,6;UBERON:0004457,1.33e-09,6;UBERON:0000042,1.33e-09,6;UBERON:0004854,1.33e-09,6;UBERON:0009034,1.33e-09,6;UBERON:0002095,1.33e-09,6;UBERON:0004782,1.33e-09,6;UBERON:0003281,1.33e-09,6;UBERON:0009664,1.33e-09,6;UBERON:0002296,1.33e-09,6;UBERON:0005602,1.33e-09,6;UBERON:0001179,1.33e-09,6;UBERON:0006293,1.33e-09,6;UBERON:0002390,1.76e-08,45;UBERON:0003061,1.76e-08,45;UBERON:0002193,8.21e-08,48;UBERON:0002405,8.21e-08,48;UBERON:0002075,8.90e-08,19;UBERON:0001041,9.83e-08,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.703943610758334,0.234064526321993,0,0,0.171200729931206,0.34968160967599,0.333109761815663,1.01237633694913,0,0.157731082679119,0.274228867211478,0,0,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0.204169356262369,2.51118978442145,1.5626706890476,2.61761871986899,1.17646297606203,3.41522742479223,0.971020706062307,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.883885756421003,0.284743361598206,0,0,0,0.289864488701678,2.58127163094416,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0,0.505524445014783,0.11418387971906,0.517875767294343,0.148442139064825,0,0.304465478312141,0,0.301445281105245,0.352766121407114,0.125666591329675,0.247194967734374,0,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0,0.209446706813455,0.510914110417183,0.359445373517761,0,0.381210681219194,0.449371918214468,0,0.251308704225729,0.173824320192276,0.511430914660661,0,0.324482526135515,0,0.248813941220186,0,0.420883711772948,0.780722657776222,0.229902104433473,0,0.30140963567143,0.340182495756639,0.384341160854549,0.0937017245597288,0.776110112217047,0,0,0,0.43839146485515,0.556094498451196,0.348252166522167,0.411564272815887,0.398068533636986,0,0.257347907114715,0.284163499395593,0,0.469052119962192,0.36012412292203,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,0,0.205809224758569,0,0,0,0.232236671860439,0.257734922644187,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0.19496408711912,1.79763881730844,1.08069024937347,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.500535317148282,0.589676985339609,0.224862112384854,0.608580364165509,0.482354319504834,0.50925170356284,0.287696137450811,1.62135226775035,0.823684239564244,11.5014565221884,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.184753190166605,0.189491411770485,0,0.339490171550376,0.234690248288502,0,0,0,0.472905432318573,1.10732344824387,0.797273843287435,1.3109065177259,0.345369963731791,0.578596234326046,0,0.54390568381871,0.491764273019036,0,0,0.234423373184406,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0.534196811001766,0.162886959353576,0.494910368917606,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0,0,1.09060118843252,0,1.26414703174326,0,1.03135543248187,0.340439605753788,0.36012218806262,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.322928853391811,0.422190474497091,0.238744688006273,0.328281799490123,0,0.370850604021019,1.36696704638282,0.206386867963223,0.925972636848558,3.57900068308913,1.91371918809435,1.83022538565218,0.679913719975421,0.559805809294632,0.276399947608848,0.954670618015114,0,0,0.324016022465404,0,0.218362563746178,0.134864346384821,0.330613822901344,0,0,0,0.56369293868419,0.448549638131936,0,0.388902376688095,0.129159823477731,0.506868376472335,0.352071715937262,0.651021924219751,0.209718688851422,0,0.288030006257865,0.948033361884535,0.202725215290164,0.513554785824136,0.25984164595559,0.716106782669926,0.198681354781265,1.08175904567972,1.77227432609493,1.11063094942962,0.838274873204998,2.41982844328417,2.14407337627455,1.25075394132428,1.28564592399726,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0.515559547031063,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.754505365544305,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.25384382367503,0,0,0.271608227691724,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0,0,0.249810577937946,0,0,0.382576664137687,0,0.231867835620421 | |||
|short_description=p@chr1:183764684..183764700,- | |||
}} |
Revision as of 19:57, 13 September 2013
Short description: | p@chr1:183764684..183764700, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:183764684..183764700, - |
Coexpression cluster: | MCL_coexpression_mm9:82 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.74e-12 | 29 |
immune organ | 3.74e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 1.01e-09 | 35 |
spleen | 1.33e-09 | 6 |
cavity lining | 1.33e-09 | 6 |
serous membrane | 1.33e-09 | 6 |
gastrointestinal system mesentery | 1.33e-09 | 6 |
stomach region | 1.33e-09 | 6 |
mesentery | 1.33e-09 | 6 |
gastrointestinal system serosa | 1.33e-09 | 6 |
mesentery of stomach | 1.33e-09 | 6 |
gut mesentery | 1.33e-09 | 6 |
dorsal mesentery | 1.33e-09 | 6 |
dorsal mesogastrium | 1.33e-09 | 6 |
peritoneal cavity | 1.33e-09 | 6 |
spleen primordium | 1.33e-09 | 6 |
hematopoietic system | 1.76e-08 | 45 |
blood island | 1.76e-08 | 45 |
hemolymphoid system | 8.21e-08 | 48 |
immune system | 8.21e-08 | 48 |
viscus | 8.90e-08 | 19 |
foregut | 9.83e-08 | 80 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.73e-11 | 3 |
muscle cancer | 2.73e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.