FFCP PHASE1:Mm9::chr1:138505059..138505064,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=29|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:138505059..138505064,-|id=chr1:138505059..138505064,-|ontology_enrichment_celltype=CL:0000624!1.37e-47!8;CL:0000791!3.08e-42!9;CL:0000789!3.08e-42!9;CL:0002420!3.08e-42!9;CL:0002419!3.08e-42!9;CL:0000790!3.08e-42!9;CL:0000893!1.48e-35!6;CL:0002489!1.48e-35!6;CL:0000898!1.48e-35!6;CL:0000809!1.48e-35!6;CL:0000810!1.48e-35!6;CL:0000895!1.48e-35!6;CL:0000808!1.48e-35!6;CL:0000894!1.48e-35!6;CL:0000806!1.48e-35!6;CL:0000807!1.48e-35!6;CL:0000805!1.48e-35!6;CL:0002425!1.48e-35!6;CL:0002436!1.48e-35!6;CL:0002427!1.48e-35!6;CL:0002428!1.48e-35!6;CL:0002429!1.48e-35!6;CL:0002433!1.48e-35!6;CL:0002431!1.48e-35!6;CL:0002432!1.48e-35!6;CL:0000084!1.91e-34!11;CL:0000827!1.91e-34!11;CL:0000838!1.61e-31!12;CL:0000542!4.80e-29!13;CL:0000051!4.80e-29!13;CL:0002031!8.63e-23!25;CL:0000738!4.79e-22!17;CL:0002087!4.79e-22!17;CL:0000988!1.46e-17!32;CL:0002032!1.46e-17!32;CL:0000037!1.46e-17!32;CL:0000566!1.46e-17!32;CL:0000837!1.46e-17!32;CL:0002320!1.95e-14!46;CL:0000134!1.95e-14!46;CL:0000219!4.24e-12!54;CL:0000063!1.20e-09!66;CL:0000815!1.20e-07!1;CL:0000792!1.20e-07!1;CL:0000115!3.20e-07!1;CL:0000213!3.20e-07!1;CL:0002078!3.20e-07!1;CL:0002262!3.20e-07!1;CL:1000398!3.20e-07!1|ontology_enrichment_celltype_v019_2=CL:0000624,3.71e-65,8;CL:0000791,5.24e-58,9;CL:0000789,5.24e-58,9;CL:0002420,5.24e-58,9;CL:0002419,5.24e-58,9;CL:0000790,5.24e-58,9;CL:0000084,1.34e-47,11;CL:0000827,1.34e-47,11;CL:0000838,1.08e-43,12;CL:0000542,2.18e-40,13;CL:0000051,2.18e-40,13;CL:0000893,1.16e-38,6;CL:0002489,1.16e-38,6;CL:0000898,1.16e-38,6;CL:0000809,1.16e-38,6;CL:0000810,1.16e-38,6;CL:0000895,1.16e-38,6;CL:0000808,1.16e-38,6;CL:0000894,1.16e-38,6;CL:0000806,1.16e-38,6;CL:0000807,1.16e-38,6;CL:0000805,1.16e-38,6;CL:0002425,1.16e-38,6;CL:0002436,1.16e-38,6;CL:0002427,1.16e-38,6;CL:0002428,1.16e-38,6;CL:0002429,1.16e-38,6;CL:0002433,1.16e-38,6;CL:0002431,1.16e-38,6;CL:0002432,1.16e-38,6;CL:0000738,4.81e-31,17;CL:0002087,4.81e-31,17;CL:0002031,2.66e-21,25;CL:0000988,9.31e-17,32;CL:0002032,9.31e-17,32;CL:0000037,9.31e-17,32;CL:0000837,9.31e-17,32;CL:0000815,3.44e-16,1;CL:0000792,3.44e-16,1;CL:0002320,8.56e-12,46;CL:0000134,8.56e-12,46;CL:0000219,4.19e-10,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!9.57e-20!23;UBERON:0000974!9.57e-20!23;UBERON:0004807!9.57e-20!23;UBERON:0005058!9.57e-20!23;UBERON:0003351!9.57e-20!23;UBERON:0009113!9.57e-20!23;UBERON:0003295!9.57e-20!23;UBERON:0009722!9.57e-20!23;UBERON:0005562!9.57e-20!23;UBERON:0007690!9.57e-20!23;UBERON:0006562!6.95e-19!24;UBERON:0003408!6.95e-19!24;UBERON:0001557!6.95e-19!24;UBERON:0001042!6.95e-19!24;UBERON:0008814!6.95e-19!24;UBERON:0009145!6.95e-19!24;UBERON:0000072!1.11e-16!27;UBERON:0002193!3.88e-16!48;UBERON:0004177!1.83e-15!29;UBERON:0002384!1.95e-14!46;UBERON:0002390!1.97e-14!45;UBERON:0003061!1.97e-14!45;UBERON:0000063!1.21e-12!35;UBERON:0002405!1.26e-12!70;UBERON:0000065!1.21e-10!41;UBERON:0005057!2.19e-10!51;UBERON:0001004!2.29e-10!42;UBERON:0003081!1.03e-09!88;UBERON:0003929!1.53e-09!55;UBERON:0002368!1.21e-08!60;UBERON:0002530!7.01e-08!65;UBERON:0000490!9.65e-08!66;UBERON:0005911!2.38e-07!69;UBERON:0000353!3.20e-07!1;UBERON:0003497!3.20e-07!1;UBERON:0003909!3.20e-07!1;UBERON:0003835!3.20e-07!1;UBERON:0003513!3.20e-07!1;UBERON:0001281!3.20e-07!1;UBERON:0001280!3.20e-07!1;UBERON:0004647!3.20e-07!1;UBERON:0000029!3.67e-07!1;UBERON:0001097!3.67e-07!1;UBERON:0003968!3.67e-07!1;UBERON:0008785!3.67e-07!1;UBERON:0001467!3.67e-07!1;UBERON:0001421!3.67e-07!1;UBERON:0000949!5.45e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.56e-12,46;UBERON:0002370,1.40e-10,23;UBERON:0000974,1.40e-10,23;UBERON:0004807,1.40e-10,23;UBERON:0005058,1.40e-10,23;UBERON:0003351,1.40e-10,23;UBERON:0009113,1.40e-10,23;UBERON:0003295,1.40e-10,23;UBERON:0009722,1.40e-10,23;UBERON:0005562,1.40e-10,23;UBERON:0007690,1.40e-10,23;UBERON:0006562,3.65e-10,24;UBERON:0003408,3.65e-10,24;UBERON:0001557,3.65e-10,24;UBERON:0001042,3.65e-10,24;UBERON:0008814,3.65e-10,24;UBERON:0009145,3.65e-10,24;UBERON:0000072,4.30e-09,27;UBERON:0004177,1.68e-08,29;UBERON:0005057,1.68e-08,29;UBERON:0000077,4.00e-07,35;UBERON:0007811,6.13e-07,36|phase1_expression=0,0,0,0,0,0,0,11.3628524628587,1.12630977721333,2.10658073689794,0.856089841127525,0.0797721589953364,2.9104124088305,1.48614684112296,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5282592781021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:138505059..138505064,- | |||
|id=chr1:138505059..138505064,- | |||
|ontology_enrichment_celltype=CL:0000624!1.37e-47!8;CL:0000791!3.08e-42!9;CL:0000789!3.08e-42!9;CL:0002420!3.08e-42!9;CL:0002419!3.08e-42!9;CL:0000790!3.08e-42!9;CL:0000893!1.48e-35!6;CL:0002489!1.48e-35!6;CL:0000898!1.48e-35!6;CL:0000809!1.48e-35!6;CL:0000810!1.48e-35!6;CL:0000895!1.48e-35!6;CL:0000808!1.48e-35!6;CL:0000894!1.48e-35!6;CL:0000806!1.48e-35!6;CL:0000807!1.48e-35!6;CL:0000805!1.48e-35!6;CL:0002425!1.48e-35!6;CL:0002436!1.48e-35!6;CL:0002427!1.48e-35!6;CL:0002428!1.48e-35!6;CL:0002429!1.48e-35!6;CL:0002433!1.48e-35!6;CL:0002431!1.48e-35!6;CL:0002432!1.48e-35!6;CL:0000084!1.91e-34!11;CL:0000827!1.91e-34!11;CL:0000838!1.61e-31!12;CL:0000542!4.80e-29!13;CL:0000051!4.80e-29!13;CL:0002031!8.63e-23!25;CL:0000738!4.79e-22!17;CL:0002087!4.79e-22!17;CL:0000988!1.46e-17!32;CL:0002032!1.46e-17!32;CL:0000037!1.46e-17!32;CL:0000566!1.46e-17!32;CL:0000837!1.46e-17!32;CL:0002320!1.95e-14!46;CL:0000134!1.95e-14!46;CL:0000219!4.24e-12!54;CL:0000063!1.20e-09!66;CL:0000815!1.20e-07!1;CL:0000792!1.20e-07!1;CL:0000115!3.20e-07!1;CL:0000213!3.20e-07!1;CL:0002078!3.20e-07!1;CL:0002262!3.20e-07!1;CL:1000398!3.20e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.71e-65,8;CL:0000791,5.24e-58,9;CL:0000789,5.24e-58,9;CL:0002420,5.24e-58,9;CL:0002419,5.24e-58,9;CL:0000790,5.24e-58,9;CL:0000084,1.34e-47,11;CL:0000827,1.34e-47,11;CL:0000838,1.08e-43,12;CL:0000542,2.18e-40,13;CL:0000051,2.18e-40,13;CL:0000893,1.16e-38,6;CL:0002489,1.16e-38,6;CL:0000898,1.16e-38,6;CL:0000809,1.16e-38,6;CL:0000810,1.16e-38,6;CL:0000895,1.16e-38,6;CL:0000808,1.16e-38,6;CL:0000894,1.16e-38,6;CL:0000806,1.16e-38,6;CL:0000807,1.16e-38,6;CL:0000805,1.16e-38,6;CL:0002425,1.16e-38,6;CL:0002436,1.16e-38,6;CL:0002427,1.16e-38,6;CL:0002428,1.16e-38,6;CL:0002429,1.16e-38,6;CL:0002433,1.16e-38,6;CL:0002431,1.16e-38,6;CL:0002432,1.16e-38,6;CL:0000738,4.81e-31,17;CL:0002087,4.81e-31,17;CL:0002031,2.66e-21,25;CL:0000988,9.31e-17,32;CL:0002032,9.31e-17,32;CL:0000037,9.31e-17,32;CL:0000837,9.31e-17,32;CL:0000815,3.44e-16,1;CL:0000792,3.44e-16,1;CL:0002320,8.56e-12,46;CL:0000134,8.56e-12,46;CL:0000219,4.19e-10,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!9.57e-20!23;UBERON:0000974!9.57e-20!23;UBERON:0004807!9.57e-20!23;UBERON:0005058!9.57e-20!23;UBERON:0003351!9.57e-20!23;UBERON:0009113!9.57e-20!23;UBERON:0003295!9.57e-20!23;UBERON:0009722!9.57e-20!23;UBERON:0005562!9.57e-20!23;UBERON:0007690!9.57e-20!23;UBERON:0006562!6.95e-19!24;UBERON:0003408!6.95e-19!24;UBERON:0001557!6.95e-19!24;UBERON:0001042!6.95e-19!24;UBERON:0008814!6.95e-19!24;UBERON:0009145!6.95e-19!24;UBERON:0000072!1.11e-16!27;UBERON:0002193!3.88e-16!48;UBERON:0004177!1.83e-15!29;UBERON:0002384!1.95e-14!46;UBERON:0002390!1.97e-14!45;UBERON:0003061!1.97e-14!45;UBERON:0000063!1.21e-12!35;UBERON:0002405!1.26e-12!70;UBERON:0000065!1.21e-10!41;UBERON:0005057!2.19e-10!51;UBERON:0001004!2.29e-10!42;UBERON:0003081!1.03e-09!88;UBERON:0003929!1.53e-09!55;UBERON:0002368!1.21e-08!60;UBERON:0002530!7.01e-08!65;UBERON:0000490!9.65e-08!66;UBERON:0005911!2.38e-07!69;UBERON:0000353!3.20e-07!1;UBERON:0003497!3.20e-07!1;UBERON:0003909!3.20e-07!1;UBERON:0003835!3.20e-07!1;UBERON:0003513!3.20e-07!1;UBERON:0001281!3.20e-07!1;UBERON:0001280!3.20e-07!1;UBERON:0004647!3.20e-07!1;UBERON:0000029!3.67e-07!1;UBERON:0001097!3.67e-07!1;UBERON:0003968!3.67e-07!1;UBERON:0008785!3.67e-07!1;UBERON:0001467!3.67e-07!1;UBERON:0001421!3.67e-07!1;UBERON:0000949!5.45e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.56e-12,46;UBERON:0002370,1.40e-10,23;UBERON:0000974,1.40e-10,23;UBERON:0004807,1.40e-10,23;UBERON:0005058,1.40e-10,23;UBERON:0003351,1.40e-10,23;UBERON:0009113,1.40e-10,23;UBERON:0003295,1.40e-10,23;UBERON:0009722,1.40e-10,23;UBERON:0005562,1.40e-10,23;UBERON:0007690,1.40e-10,23;UBERON:0006562,3.65e-10,24;UBERON:0003408,3.65e-10,24;UBERON:0001557,3.65e-10,24;UBERON:0001042,3.65e-10,24;UBERON:0008814,3.65e-10,24;UBERON:0009145,3.65e-10,24;UBERON:0000072,4.30e-09,27;UBERON:0004177,1.68e-08,29;UBERON:0005057,1.68e-08,29;UBERON:0000077,4.00e-07,35;UBERON:0007811,6.13e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,11.3628524628587,1.12630977721333,2.10658073689794,0.856089841127525,0.0797721589953364,2.9104124088305,1.48614684112296,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5282592781021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:138505059..138505064,- | |||
}} |
Revision as of 19:04, 13 September 2013
Short description: | p@chr1:138505059..138505064, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:138505059..138505064, - |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.56e-12 | 46 |
thymus | 1.40e-10 | 23 |
neck | 1.40e-10 | 23 |
respiratory system epithelium | 1.40e-10 | 23 |
hemolymphoid system gland | 1.40e-10 | 23 |
pharyngeal epithelium | 1.40e-10 | 23 |
thymic region | 1.40e-10 | 23 |
pharyngeal gland | 1.40e-10 | 23 |
entire pharyngeal arch endoderm | 1.40e-10 | 23 |
thymus primordium | 1.40e-10 | 23 |
early pharyngeal endoderm | 1.40e-10 | 23 |
pharynx | 3.65e-10 | 24 |
gland of gut | 3.65e-10 | 24 |
upper respiratory tract | 3.65e-10 | 24 |
chordate pharynx | 3.65e-10 | 24 |
pharyngeal arch system | 3.65e-10 | 24 |
pharyngeal region of foregut | 3.65e-10 | 24 |
segment of respiratory tract | 4.30e-09 | 27 |
hemopoietic organ | 1.68e-08 | 29 |
immune organ | 1.68e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 4.00e-07 | 35 |
craniocervical region | 6.13e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.