FFCP PHASE1:Mm9::chr1:133534931..133534940,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13034|HGNC=|MCL_coexpression_id=36|UniProt=P70269,B8YPG2|association_with_transcript=40bp_to_NM_007799,uc007cnm.1,uc007cnn.2_5end|description=CAGE_peak_8_at_Ctse_5end|id=chr1:133534931..133534940,+|ontology_enrichment_celltype=CL:0000988!5.58e-12!32;CL:0002032!5.58e-12!32;CL:0000037!5.58e-12!32;CL:0000566!5.58e-12!32;CL:0000837!5.58e-12!32;CL:0002031!7.16e-09!25;CL:0000791!4.42e-08!9;CL:0000789!4.42e-08!9;CL:0002420!4.42e-08!9;CL:0002419!4.42e-08!9;CL:0000790!4.42e-08!9;CL:0002320!1.69e-07!46;CL:0000134!1.69e-07!46;CL:0000624!3.48e-07!8;CL:0000838!5.07e-07!12;CL:0000049!5.31e-07!19|ontology_enrichment_celltype_v019_2=CL:0000988,6.96e-14,32;CL:0002032,6.96e-14,32;CL:0000037,6.96e-14,32;CL:0000837,6.96e-14,32;CL:0002031,1.29e-12,25;CL:0000791,8.94e-11,9;CL:0000789,8.94e-11,9;CL:0002420,8.94e-11,9;CL:0002419,8.94e-11,9;CL:0000790,8.94e-11,9;CL:0000738,2.18e-10,17;CL:0002087,2.18e-10,17;CL:0000838,2.96e-10,12;CL:0000542,2.39e-09,13;CL:0000051,2.39e-09,13;CL:0000624,4.37e-09,8;CL:0000084,1.34e-08,11;CL:0000827,1.34e-08,11;CL:0002320,1.98e-08,46;CL:0000134,1.98e-08,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.42e-07,3;DOID:4045,2.42e-07,3|ontology_enrichment_uberon=UBERON:0002193!3.87e-26!48;UBERON:0002390!4.89e-24!45;UBERON:0003061!4.89e-24!45;UBERON:0002405!4.66e-21!70;UBERON:0004177!2.81e-17!29;UBERON:0002370!1.97e-13!23;UBERON:0000974!1.97e-13!23;UBERON:0004807!1.97e-13!23;UBERON:0005058!1.97e-13!23;UBERON:0003351!1.97e-13!23;UBERON:0009113!1.97e-13!23;UBERON:0003295!1.97e-13!23;UBERON:0009722!1.97e-13!23;UBERON:0005562!1.97e-13!23;UBERON:0007690!1.97e-13!23;UBERON:0006562!1.44e-12!24;UBERON:0003408!1.44e-12!24;UBERON:0001557!1.44e-12!24;UBERON:0001042!1.44e-12!24;UBERON:0008814!1.44e-12!24;UBERON:0009145!1.44e-12!24;UBERON:0005057!2.44e-12!51;UBERON:0003081!9.28e-12!88;UBERON:0000072!2.21e-10!27;UBERON:0000065!1.61e-09!41;UBERON:0001004!4.31e-09!42;UBERON:0000063!4.65e-08!35;UBERON:0001474!1.61e-07!22;UBERON:0004765!1.61e-07!22;UBERON:0001434!1.61e-07!22;UBERON:0002384!1.69e-07!46;UBERON:0002371!1.69e-07!16;UBERON:0001041!4.68e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.15e-21,48;UBERON:0002405,1.15e-21,48;UBERON:0002390,2.22e-21,45;UBERON:0003061,2.22e-21,45;UBERON:0004177,1.86e-18,29;UBERON:0005057,1.86e-18,29;UBERON:0002370,6.36e-17,23;UBERON:0000974,6.36e-17,23;UBERON:0004807,6.36e-17,23;UBERON:0005058,6.36e-17,23;UBERON:0003351,6.36e-17,23;UBERON:0009113,6.36e-17,23;UBERON:0003295,6.36e-17,23;UBERON:0009722,6.36e-17,23;UBERON:0005562,6.36e-17,23;UBERON:0007690,6.36e-17,23;UBERON:0006562,4.64e-16,24;UBERON:0003408,4.64e-16,24;UBERON:0001557,4.64e-16,24;UBERON:0001042,4.64e-16,24;UBERON:0008814,4.64e-16,24;UBERON:0009145,4.64e-16,24;UBERON:0000077,1.65e-14,35;UBERON:0000072,7.37e-14,27;UBERON:0007811,7.22e-11,36;UBERON:0003081,6.31e-10,87;UBERON:0000153,1.77e-08,43;UBERON:0002384,1.98e-08,46;UBERON:0000065,6.72e-08,41;UBERON:0000926,8.43e-08,120;UBERON:0004120,8.43e-08,120;UBERON:0006603,8.43e-08,120;UBERON:0001004,1.25e-07,42;UBERON:0000490,8.37e-07,66|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,1.97104211012333,1.40438715793196,0.171217968225505,0.0797721589953364,4.10881751834894,5.42006494997784,0.999329285446988,0.607425802169478,1.39912375625629,1.10411757875383,2.19383093769182,1.69755860719212,0.17008658030214,0,0,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,3.1253413780952,2.61761871986899,7.05877785637217,7.5135003345429,4.36959317728038,0,0,0,0,0,0,0,0,0,3.85899993932794,2.90144856804538,2.68875039313971,0,0,0,0,0,0,0,0,0.899899717281399,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,2.84831672011889,0,0,0,0,0,0,0,0,0,0.884610551949874,0,1.10420759230197,1.93950101254089,0,0,0,0.766371165625774,2.51611761462433,0.599902730993408,1.52484272487678,0,0,0,0,0,0,0,0,0.746441823660558,0.252722758433675,1.47309299120532,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,0.852490498186778,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0.763877555344259,0.287696137450811,0.324270453550071,0.823684239564244,1.43768206527355,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0.797273843287435,0.491589944147214,0.172684981865896,0.289298117163023,1.50791283939272,1.63171705145613,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0,1.53783792718067,0.412773735926445,0.740778109478847,0.376736914009382,1.36694227721025,1.60144721244566,2.20971958992012,4.05859211738608,3.31679937130617,0,0,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52808896502543,0.608175645870493,0.718976700153791,0.51968329191118,1.07416017400489,1.78813219303138,1.44234539423963,2.80610101631697,2.52416124870369,4.11516755936999,2.62148081355785,2.53390489923356,4.32953287381483,3.62318396762864,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p8@Ctse}} | ||
|EntrezGene=13034 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=P70269,B8YPG2 | |||
|association_with_transcript=40bp_to_NM_007799,uc007cnm.1,uc007cnn.2_5end | |||
|description=CAGE_peak_8_at_Ctse_5end | |||
|id=chr1:133534931..133534940,+ | |||
|ontology_enrichment_celltype=CL:0000988!5.58e-12!32;CL:0002032!5.58e-12!32;CL:0000037!5.58e-12!32;CL:0000566!5.58e-12!32;CL:0000837!5.58e-12!32;CL:0002031!7.16e-09!25;CL:0000791!4.42e-08!9;CL:0000789!4.42e-08!9;CL:0002420!4.42e-08!9;CL:0002419!4.42e-08!9;CL:0000790!4.42e-08!9;CL:0002320!1.69e-07!46;CL:0000134!1.69e-07!46;CL:0000624!3.48e-07!8;CL:0000838!5.07e-07!12;CL:0000049!5.31e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.96e-14,32;CL:0002032,6.96e-14,32;CL:0000037,6.96e-14,32;CL:0000837,6.96e-14,32;CL:0002031,1.29e-12,25;CL:0000791,8.94e-11,9;CL:0000789,8.94e-11,9;CL:0002420,8.94e-11,9;CL:0002419,8.94e-11,9;CL:0000790,8.94e-11,9;CL:0000738,2.18e-10,17;CL:0002087,2.18e-10,17;CL:0000838,2.96e-10,12;CL:0000542,2.39e-09,13;CL:0000051,2.39e-09,13;CL:0000624,4.37e-09,8;CL:0000084,1.34e-08,11;CL:0000827,1.34e-08,11;CL:0002320,1.98e-08,46;CL:0000134,1.98e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.42e-07,3;DOID:4045,2.42e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.87e-26!48;UBERON:0002390!4.89e-24!45;UBERON:0003061!4.89e-24!45;UBERON:0002405!4.66e-21!70;UBERON:0004177!2.81e-17!29;UBERON:0002370!1.97e-13!23;UBERON:0000974!1.97e-13!23;UBERON:0004807!1.97e-13!23;UBERON:0005058!1.97e-13!23;UBERON:0003351!1.97e-13!23;UBERON:0009113!1.97e-13!23;UBERON:0003295!1.97e-13!23;UBERON:0009722!1.97e-13!23;UBERON:0005562!1.97e-13!23;UBERON:0007690!1.97e-13!23;UBERON:0006562!1.44e-12!24;UBERON:0003408!1.44e-12!24;UBERON:0001557!1.44e-12!24;UBERON:0001042!1.44e-12!24;UBERON:0008814!1.44e-12!24;UBERON:0009145!1.44e-12!24;UBERON:0005057!2.44e-12!51;UBERON:0003081!9.28e-12!88;UBERON:0000072!2.21e-10!27;UBERON:0000065!1.61e-09!41;UBERON:0001004!4.31e-09!42;UBERON:0000063!4.65e-08!35;UBERON:0001474!1.61e-07!22;UBERON:0004765!1.61e-07!22;UBERON:0001434!1.61e-07!22;UBERON:0002384!1.69e-07!46;UBERON:0002371!1.69e-07!16;UBERON:0001041!4.68e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.15e-21,48;UBERON:0002405,1.15e-21,48;UBERON:0002390,2.22e-21,45;UBERON:0003061,2.22e-21,45;UBERON:0004177,1.86e-18,29;UBERON:0005057,1.86e-18,29;UBERON:0002370,6.36e-17,23;UBERON:0000974,6.36e-17,23;UBERON:0004807,6.36e-17,23;UBERON:0005058,6.36e-17,23;UBERON:0003351,6.36e-17,23;UBERON:0009113,6.36e-17,23;UBERON:0003295,6.36e-17,23;UBERON:0009722,6.36e-17,23;UBERON:0005562,6.36e-17,23;UBERON:0007690,6.36e-17,23;UBERON:0006562,4.64e-16,24;UBERON:0003408,4.64e-16,24;UBERON:0001557,4.64e-16,24;UBERON:0001042,4.64e-16,24;UBERON:0008814,4.64e-16,24;UBERON:0009145,4.64e-16,24;UBERON:0000077,1.65e-14,35;UBERON:0000072,7.37e-14,27;UBERON:0007811,7.22e-11,36;UBERON:0003081,6.31e-10,87;UBERON:0000153,1.77e-08,43;UBERON:0002384,1.98e-08,46;UBERON:0000065,6.72e-08,41;UBERON:0000926,8.43e-08,120;UBERON:0004120,8.43e-08,120;UBERON:0006603,8.43e-08,120;UBERON:0001004,1.25e-07,42;UBERON:0000490,8.37e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,1.97104211012333,1.40438715793196,0.171217968225505,0.0797721589953364,4.10881751834894,5.42006494997784,0.999329285446988,0.607425802169478,1.39912375625629,1.10411757875383,2.19383093769182,1.69755860719212,0.17008658030214,0,0,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,3.1253413780952,2.61761871986899,7.05877785637217,7.5135003345429,4.36959317728038,0,0,0,0,0,0,0,0,0,3.85899993932794,2.90144856804538,2.68875039313971,0,0,0,0,0,0,0,0,0.899899717281399,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,2.84831672011889,0,0,0,0,0,0,0,0,0,0.884610551949874,0,1.10420759230197,1.93950101254089,0,0,0,0.766371165625774,2.51611761462433,0.599902730993408,1.52484272487678,0,0,0,0,0,0,0,0,0.746441823660558,0.252722758433675,1.47309299120532,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,0.852490498186778,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0.763877555344259,0.287696137450811,0.324270453550071,0.823684239564244,1.43768206527355,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0.797273843287435,0.491589944147214,0.172684981865896,0.289298117163023,1.50791283939272,1.63171705145613,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0,1.53783792718067,0.412773735926445,0.740778109478847,0.376736914009382,1.36694227721025,1.60144721244566,2.20971958992012,4.05859211738608,3.31679937130617,0,0,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52808896502543,0.608175645870493,0.718976700153791,0.51968329191118,1.07416017400489,1.78813219303138,1.44234539423963,2.80610101631697,2.52416124870369,4.11516755936999,2.62148081355785,2.53390489923356,4.32953287381483,3.62318396762864,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p8@Ctse | |||
}} |
Revision as of 18:47, 13 September 2013
Short description: | p8@Ctse |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Ctse_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 40bp_to_NM_007799, uc007cnm.1, uc007cnn.2_5end |
EntrezGene: | Ctse |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.96e-14 | 32 |
hematopoietic oligopotent progenitor cell | 6.96e-14 | 32 |
hematopoietic stem cell | 6.96e-14 | 32 |
hematopoietic multipotent progenitor cell | 6.96e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 1.29e-12 | 25 |
mature alpha-beta T cell | 8.94e-11 | 9 |
alpha-beta T cell | 8.94e-11 | 9 |
immature T cell | 8.94e-11 | 9 |
mature T cell | 8.94e-11 | 9 |
immature alpha-beta T cell | 8.94e-11 | 9 |
leukocyte | 2.18e-10 | 17 |
nongranular leukocyte | 2.18e-10 | 17 |
lymphoid lineage restricted progenitor cell | 2.96e-10 | 12 |
lymphocyte | 2.39e-09 | 13 |
common lymphoid progenitor | 2.39e-09 | 13 |
CD4-positive, alpha-beta T cell | 4.37e-09 | 8 |
T cell | 1.34e-08 | 11 |
pro-T cell | 1.34e-08 | 11 |
connective tissue cell | 1.98e-08 | 46 |
mesenchymal cell | 1.98e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.42e-07 | 3 |
muscle cancer | 2.42e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.