FFCP PHASE1:Hg19::chr6:143857718..143857750,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9749|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20956|TSSclassifier=S|UniProt=O75167|association_with_transcript=-231bp_to_ENST00000367584_5end|coexpression_cluster_id=C38|description=CAGE_peak_12_at_PHACTR2_5end|id=chr6:143857718..143857750,+|ontology_enrichment_celltype=CL:0000084!2.61e-08!25;CL:0000827!2.61e-08!25;CL:0000838!3.85e-07!52;CL:0000542!6.35e-07!53;CL:0000051!6.35e-07!53|ontology_enrichment_celltype_v019=CL:0000138;1.22e-09;6!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9|ontology_enrichment_celltype_v019_2=CL:0000058,1.22e-09,6;CL:0000138,1.22e-09,6;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;1.46e-50;1!DOID:4549;1.46e-50;1!DOID:5861;1.46e-50;1!DOID:6496;1.46e-50;1!DOID:201;1.22e-09;6!DOID:0060100;1.22e-09;6|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-50,1;DOID:4549,1.46e-50,1;DOID:5861,1.46e-50,1;DOID:6496,1.46e-50,1;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002418;6.76e-18;3!UBERON:0004755;6.76e-18;3!UBERON:0001052;1.00e-13;4!UBERON:0000160;4.68e-12;17!UBERON:0004907;2.94e-11;5!UBERON:0002108;3.42e-11;4!UBERON:0005409;1.14e-09;22!UBERON:0001871;2.26e-08;6|ontology_enrichment_uberon_v019_2=UBERON:0002418,6.76e-18,3;UBERON:0004755,6.76e-18,3;UBERON:0001052,1.00e-13,4;UBERON:0000160,4.55e-12,17;UBERON:0004907,2.94e-11,5;UBERON:0002108,3.26e-11,4;UBERON:0005409,1.11e-08,25;UBERON:0001871,2.35e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0.766440987203842,0,0,0.318565414324097,0.651083453856419,0,0,0.127986611154418,0,0,0,0.604820229674197,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0.512900250232778,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,12.708882243576,0.225980740780532,0,0,0.126621591911757,0.195551382734803,0,0,0,0.576361668616424,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.236349546921671,0.164831716762333,0.0674035438541849,0.196854963029498,0,0,0.136203406111576,0,0.412618309791701,0,0.2249738915515,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.078493092850514,0,2.24217730651031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,1.5299169235277,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0|short_description=p12@PHACTR2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9749 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20956 | |||
|TSSclassifier=S | |||
|UniProt=O75167 | |||
|association_with_transcript=-231bp_to_ENST00000367584_5end | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_12_at_PHACTR2_5end | |||
|id=chr6:143857718..143857750,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.61e-08!25;CL:0000827!2.61e-08!25;CL:0000838!3.85e-07!52;CL:0000542!6.35e-07!53;CL:0000051!6.35e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.22e-09;6!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.22e-09,6;CL:0000138,1.22e-09,6;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.46e-50;1!DOID:4549;1.46e-50;1!DOID:5861;1.46e-50;1!DOID:6496;1.46e-50;1!DOID:201;1.22e-09;6!DOID:0060100;1.22e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-50,1;DOID:4549,1.46e-50,1;DOID:5861,1.46e-50,1;DOID:6496,1.46e-50,1;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;6.76e-18;3!UBERON:0004755;6.76e-18;3!UBERON:0001052;1.00e-13;4!UBERON:0000160;4.68e-12;17!UBERON:0004907;2.94e-11;5!UBERON:0002108;3.42e-11;4!UBERON:0005409;1.14e-09;22!UBERON:0001871;2.26e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,6.76e-18,3;UBERON:0004755,6.76e-18,3;UBERON:0001052,1.00e-13,4;UBERON:0000160,4.55e-12,17;UBERON:0004907,2.94e-11,5;UBERON:0002108,3.26e-11,4;UBERON:0005409,1.11e-08,25;UBERON:0001871,2.35e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0.766440987203842,0,0,0.318565414324097,0.651083453856419,0,0,0.127986611154418,0,0,0,0.604820229674197,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0.512900250232778,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,12.708882243576,0.225980740780532,0,0,0.126621591911757,0.195551382734803,0,0,0,0.576361668616424,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.236349546921671,0.164831716762333,0.0674035438541849,0.196854963029498,0,0,0.136203406111576,0,0.412618309791701,0,0.2249738915515,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.078493092850514,0,2.24217730651031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,1.5299169235277,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p12@PHACTR2 | |||
}} |
Revision as of 18:30, 13 September 2013
Short description: | p12@PHACTR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_PHACTR2_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -231bp_to_ENST00000367584_5end |
EntrezGene: | PHACTR2 |
HGNC: | 20956 |
UniProt: | O75167 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.22e-09 | 6 |
chondrocyte | 1.22e-09 | 6 |
GAG secreting cell | 7.48e-07 | 9 |
carbohydrate secreting cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 6.76e-18 | 3 |
skeletal tissue | 6.76e-18 | 3 |
rectum | 1.00e-13 | 4 |
intestine | 4.55e-12 | 17 |
lower digestive tract | 2.94e-11 | 5 |
small intestine | 3.26e-11 | 4 |
gastrointestinal system | 1.11e-08 | 25 |
temporal lobe | 2.35e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-50 | 1 |
extraosseous chondrosarcoma | 1.46e-50 | 1 |
myxoid chondrosarcoma | 1.46e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-50 | 1 |
connective tissue cancer | 1.22e-09 | 6 |
musculoskeletal system cancer | 1.22e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.