FFCP PHASE1:Mm9::chr19:9016729..9016740,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=23942|HGNC=|UniProt=|association_with_transcript=-242bp_to_ENSMUST00000137956_5end|description=CAGE_peak_6_at_Mta2_5end|id=chr19:9016729..9016740,+|ontology_enrichment_celltype=CL:0000988!7.68e-07!32;CL:0002032!7.68e-07!32;CL:0000037!7.68e-07!32;CL:0000566!7.68e-07!32;CL:0000837!7.68e-07!32|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.50e-10!48;UBERON:0002370!5.66e-10!23;UBERON:0000974!5.66e-10!23;UBERON:0004807!5.66e-10!23;UBERON:0005058!5.66e-10!23;UBERON:0003351!5.66e-10!23;UBERON:0009113!5.66e-10!23;UBERON:0003295!5.66e-10!23;UBERON:0009722!5.66e-10!23;UBERON:0005562!5.66e-10!23;UBERON:0007690!5.66e-10!23;UBERON:0002390!1.21e-09!45;UBERON:0003061!1.21e-09!45;UBERON:0000072!4.58e-09!27;UBERON:0006562!4.77e-09!24;UBERON:0003408!4.77e-09!24;UBERON:0001557!4.77e-09!24;UBERON:0001042!4.77e-09!24;UBERON:0008814!4.77e-09!24;UBERON:0009145!4.77e-09!24;UBERON:0004177!5.78e-09!29;UBERON:0000065!3.16e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.84e-24,23;UBERON:0000974,1.84e-24,23;UBERON:0004807,1.84e-24,23;UBERON:0005058,1.84e-24,23;UBERON:0003351,1.84e-24,23;UBERON:0009113,1.84e-24,23;UBERON:0003295,1.84e-24,23;UBERON:0009722,1.84e-24,23;UBERON:0005562,1.84e-24,23;UBERON:0007690,1.84e-24,23;UBERON:0006562,2.70e-23,24;UBERON:0003408,2.70e-23,24;UBERON:0001557,2.70e-23,24;UBERON:0001042,2.70e-23,24;UBERON:0008814,2.70e-23,24;UBERON:0009145,2.70e-23,24;UBERON:0000072,2.59e-20,27;UBERON:0004177,1.15e-18,29;UBERON:0005057,1.15e-18,29;UBERON:0002390,4.15e-16,45;UBERON:0003061,4.15e-16,45;UBERON:0000077,7.29e-15,35;UBERON:0002193,7.75e-15,48;UBERON:0002405,7.75e-15,48;UBERON:0007811,2.36e-14,36;UBERON:0000153,4.51e-13,43;UBERON:0000065,3.53e-12,41;UBERON:0001004,8.31e-12,42;UBERON:0003929,3.26e-08,55;UBERON:0002368,2.97e-07,60;UBERON:0003081,3.24e-07,87|phase1_expression=0.160148847104794,0,0,0,0,0.503637815735669,0,0.516493293766305,0.703943610758334,0.70219357896598,0.34243593645101,0.638177271962691,0.342401459862411,0.174840804837995,0.666219523631325,0,0.699561878128147,0.473193248037357,0.548457734422955,0,0.17008658030214,0.992909512008853,1.04479915655574,0.47997726838022,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,1.00669563634642,2.17608642603403,2.35265659399725,0.257259436035947,0,0,0.606949382578793,0.528990979272033,1.26766280701236,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0.768436610643109,0.207379224616955,0.405017814995072,0.210324961351382,0,0.441737081903227,0.122490799214954,0.0958454710182364,0.919218786610021,0,0,0,0.131886287730194,0.274462930807229,0,0,0,0.15279824777681,0,0.427115042397309,0.186399445825301,0,0.226714680320357,0,0,0,0,0.649776417447669,0,0,0.170430322578058,0.519572009205738,0,0.281686839553361,0,0,7.11066703153331,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,0.517875767294343,0,0,0,0,0.301445281105245,0.352766121407114,0.502666365318702,0.247194967734374,0,0.884610551949874,0.161766849947409,0,0.484875253135222,0,0,0,0,1.55759661857696,2.39961092397363,1.27070227073065,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0.20778804455956,0,0.611036183101898,0.124406970610093,0,0,0.390361328888111,0,0.180062129805349,0,0.136072998302656,0.2562274405697,0.374806898238915,0.258703370739016,0.646703978798527,0,1.23165786914764,0,0,0.348252166522167,0.411564272815887,0.199034266818493,2.1066395619397,2.31613116403244,0.568326998791185,0.207125772535502,0.938104239924385,0,0,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0.467061369468678,0,0,0,0.292399974850665,0.219550115291051,0,0.210289948564127,0.617427674275707,0.330418782983798,0.264450566663544,0,0.696710015581316,0.128867461322093,0.80673409849337,0.667134131534611,0.380451252225118,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0,0.420814919341911,0.126473074248515,0,0,0.246794327843601,0,0.333690211432188,0.196558995113203,0.449724224769707,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0.509235257325564,0.469380496577004,0.670025029767263,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0,0,0,0.144649058581512,1.50791283939272,0,0,0,0,0,0.327869890753351,0.252470927204373,0,0,0,0,0.222798674082394,1.13230612315533,0.809621403349789,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0.81443479676788,0,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.49465875882444,1.13025098687134,0.241251699712623,0.358117032009409,0.164140899745061,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0.188368457004691,0.546776910884101,0.686334519619568,0.509935289981566,1.53946597556024,1.38199973804424,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.330613822901344,0,0,0,1.12738587736838,0.598066184175915,0.165458490457098,0.194451188344048,0.516639293910924,0,0.938857909166032,0,0.419437377702843,1.20792060413003,0.864090018773596,3.79213344753814,1.82452693761148,1.33524244314275,1.68897069871134,2.50637373934474,2.18549490259391,3.00488623799922,2.36303243479324,2.52416124870369,2.59103142626999,3.02478555410522,2.33898913775406,1.92423683280659,2.68816875017609,0,0.221985953374065,0.358855426437903,0.167884616364078,0,0.750729901804728,0,0.214368379079066,0,0.564751842617067,0,0,0.515559547031063,0,0,1.35004500046361,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0,0.618105171716683,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0.715308569841963,0.436039249896986,0.282328141245992,0.0846146078916765,0.182927972872773,0.789209134313529,0,0,0.118635018124174,0,0.409231043169689,0.619747364743864,0.385813221962283,0,0,0,0.57386499620653,0.220591419119515,0.231867835620421|short_description=p6@Mta2}} | ||
|EntrezGene=23942 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-242bp_to_ENSMUST00000137956_5end | |||
|description=CAGE_peak_6_at_Mta2_5end | |||
|id=chr19:9016729..9016740,+ | |||
|ontology_enrichment_celltype=CL:0000988!7.68e-07!32;CL:0002032!7.68e-07!32;CL:0000037!7.68e-07!32;CL:0000566!7.68e-07!32;CL:0000837!7.68e-07!32 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.50e-10!48;UBERON:0002370!5.66e-10!23;UBERON:0000974!5.66e-10!23;UBERON:0004807!5.66e-10!23;UBERON:0005058!5.66e-10!23;UBERON:0003351!5.66e-10!23;UBERON:0009113!5.66e-10!23;UBERON:0003295!5.66e-10!23;UBERON:0009722!5.66e-10!23;UBERON:0005562!5.66e-10!23;UBERON:0007690!5.66e-10!23;UBERON:0002390!1.21e-09!45;UBERON:0003061!1.21e-09!45;UBERON:0000072!4.58e-09!27;UBERON:0006562!4.77e-09!24;UBERON:0003408!4.77e-09!24;UBERON:0001557!4.77e-09!24;UBERON:0001042!4.77e-09!24;UBERON:0008814!4.77e-09!24;UBERON:0009145!4.77e-09!24;UBERON:0004177!5.78e-09!29;UBERON:0000065!3.16e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.84e-24,23;UBERON:0000974,1.84e-24,23;UBERON:0004807,1.84e-24,23;UBERON:0005058,1.84e-24,23;UBERON:0003351,1.84e-24,23;UBERON:0009113,1.84e-24,23;UBERON:0003295,1.84e-24,23;UBERON:0009722,1.84e-24,23;UBERON:0005562,1.84e-24,23;UBERON:0007690,1.84e-24,23;UBERON:0006562,2.70e-23,24;UBERON:0003408,2.70e-23,24;UBERON:0001557,2.70e-23,24;UBERON:0001042,2.70e-23,24;UBERON:0008814,2.70e-23,24;UBERON:0009145,2.70e-23,24;UBERON:0000072,2.59e-20,27;UBERON:0004177,1.15e-18,29;UBERON:0005057,1.15e-18,29;UBERON:0002390,4.15e-16,45;UBERON:0003061,4.15e-16,45;UBERON:0000077,7.29e-15,35;UBERON:0002193,7.75e-15,48;UBERON:0002405,7.75e-15,48;UBERON:0007811,2.36e-14,36;UBERON:0000153,4.51e-13,43;UBERON:0000065,3.53e-12,41;UBERON:0001004,8.31e-12,42;UBERON:0003929,3.26e-08,55;UBERON:0002368,2.97e-07,60;UBERON:0003081,3.24e-07,87 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.503637815735669,0,0.516493293766305,0.703943610758334,0.70219357896598,0.34243593645101,0.638177271962691,0.342401459862411,0.174840804837995,0.666219523631325,0,0.699561878128147,0.473193248037357,0.548457734422955,0,0.17008658030214,0.992909512008853,1.04479915655574,0.47997726838022,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,1.00669563634642,2.17608642603403,2.35265659399725,0.257259436035947,0,0,0.606949382578793,0.528990979272033,1.26766280701236,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0.768436610643109,0.207379224616955,0.405017814995072,0.210324961351382,0,0.441737081903227,0.122490799214954,0.0958454710182364,0.919218786610021,0,0,0,0.131886287730194,0.274462930807229,0,0,0,0.15279824777681,0,0.427115042397309,0.186399445825301,0,0.226714680320357,0,0,0,0,0.649776417447669,0,0,0.170430322578058,0.519572009205738,0,0.281686839553361,0,0,7.11066703153331,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,0.517875767294343,0,0,0,0,0.301445281105245,0.352766121407114,0.502666365318702,0.247194967734374,0,0.884610551949874,0.161766849947409,0,0.484875253135222,0,0,0,0,1.55759661857696,2.39961092397363,1.27070227073065,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0.20778804455956,0,0.611036183101898,0.124406970610093,0,0,0.390361328888111,0,0.180062129805349,0,0.136072998302656,0.2562274405697,0.374806898238915,0.258703370739016,0.646703978798527,0,1.23165786914764,0,0,0.348252166522167,0.411564272815887,0.199034266818493,2.1066395619397,2.31613116403244,0.568326998791185,0.207125772535502,0.938104239924385,0,0,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0.467061369468678,0,0,0,0.292399974850665,0.219550115291051,0,0.210289948564127,0.617427674275707,0.330418782983798,0.264450566663544,0,0.696710015581316,0.128867461322093,0.80673409849337,0.667134131534611,0.380451252225118,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0,0.420814919341911,0.126473074248515,0,0,0.246794327843601,0,0.333690211432188,0.196558995113203,0.449724224769707,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0.509235257325564,0.469380496577004,0.670025029767263,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0,0,0,0.144649058581512,1.50791283939272,0,0,0,0,0,0.327869890753351,0.252470927204373,0,0,0,0,0.222798674082394,1.13230612315533,0.809621403349789,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0.81443479676788,0,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.49465875882444,1.13025098687134,0.241251699712623,0.358117032009409,0.164140899745061,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0.188368457004691,0.546776910884101,0.686334519619568,0.509935289981566,1.53946597556024,1.38199973804424,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.330613822901344,0,0,0,1.12738587736838,0.598066184175915,0.165458490457098,0.194451188344048,0.516639293910924,0,0.938857909166032,0,0.419437377702843,1.20792060413003,0.864090018773596,3.79213344753814,1.82452693761148,1.33524244314275,1.68897069871134,2.50637373934474,2.18549490259391,3.00488623799922,2.36303243479324,2.52416124870369,2.59103142626999,3.02478555410522,2.33898913775406,1.92423683280659,2.68816875017609,0,0.221985953374065,0.358855426437903,0.167884616364078,0,0.750729901804728,0,0.214368379079066,0,0.564751842617067,0,0,0.515559547031063,0,0,1.35004500046361,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0,0.618105171716683,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0.715308569841963,0.436039249896986,0.282328141245992,0.0846146078916765,0.182927972872773,0.789209134313529,0,0,0.118635018124174,0,0.409231043169689,0.619747364743864,0.385813221962283,0,0,0,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p6@Mta2 | |||
}} |
Revision as of 18:29, 13 September 2013
Short description: | p6@Mta2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Mta2_5end |
Coexpression cluster: | NA |
Association with transcript: | -242bp_to_ENSMUST00000137956_5end |
EntrezGene: | Mta2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.84e-24 | 23 |
neck | 1.84e-24 | 23 |
respiratory system epithelium | 1.84e-24 | 23 |
hemolymphoid system gland | 1.84e-24 | 23 |
pharyngeal epithelium | 1.84e-24 | 23 |
thymic region | 1.84e-24 | 23 |
pharyngeal gland | 1.84e-24 | 23 |
entire pharyngeal arch endoderm | 1.84e-24 | 23 |
thymus primordium | 1.84e-24 | 23 |
early pharyngeal endoderm | 1.84e-24 | 23 |
pharynx | 2.70e-23 | 24 |
gland of gut | 2.70e-23 | 24 |
upper respiratory tract | 2.70e-23 | 24 |
chordate pharynx | 2.70e-23 | 24 |
pharyngeal arch system | 2.70e-23 | 24 |
pharyngeal region of foregut | 2.70e-23 | 24 |
segment of respiratory tract | 2.59e-20 | 27 |
hemopoietic organ | 1.15e-18 | 29 |
immune organ | 1.15e-18 | 29 |
hematopoietic system | 4.15e-16 | 45 |
blood island | 4.15e-16 | 45 |
mixed endoderm/mesoderm-derived structure | 7.29e-15 | 35 |
hemolymphoid system | 7.75e-15 | 48 |
immune system | 7.75e-15 | 48 |
craniocervical region | 2.36e-14 | 36 |
anterior region of body | 4.51e-13 | 43 |
respiratory tract | 3.53e-12 | 41 |
respiratory system | 8.31e-12 | 42 |
gut epithelium | 3.26e-08 | 55 |
endocrine gland | 2.97e-07 | 60 |
lateral plate mesoderm | 3.24e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.