FFCP PHASE1:Mm9::chr19:6497949..6497979,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18190|HGNC=|MCL_coexpression_id=42|UniProt=E9PUN1,Q3TQ54|association_with_transcript=114bp_to_ENSMUST00000113459,uc008giy.1_5end|description=CAGE_peak_6_at_Nrxn2_5end|id=chr19:6497949..6497979,+|ontology_enrichment_celltype=CL:0000117!1.68e-11!23;CL:0000337!1.68e-11!23;CL:0000221!2.55e-07!44;CL:0000133!2.55e-07!44;CL:0002319!3.12e-07!43;CL:0000540!8.58e-07!33;CL:0000047!8.58e-07!33;CL:0000031!8.58e-07!33;CL:0000404!8.58e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.61e-17,23;CL:0000337,1.61e-17,23;CL:0000540,5.13e-11,33;CL:0000047,5.13e-11,33;CL:0000031,5.13e-11,33;CL:0000404,5.13e-11,33;CL:0002319,2.46e-10,43;CL:0000221,5.33e-10,44;CL:0000133,5.33e-10,44;CL:0000393,9.69e-09,39;CL:0000211,9.69e-09,39;CL:0002612,4.49e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.29e-27!73;UBERON:0005743!2.29e-27!73;UBERON:0001049!5.92e-27!52;UBERON:0005068!5.92e-27!52;UBERON:0006241!5.92e-27!52;UBERON:0007135!5.92e-27!52;UBERON:0000073!1.35e-26!75;UBERON:0001016!1.35e-26!75;UBERON:0002346!5.24e-26!71;UBERON:0003075!5.24e-26!71;UBERON:0007284!5.24e-26!71;UBERON:0000955!4.38e-25!50;UBERON:0006238!4.38e-25!50;UBERON:0004121!1.92e-24!102;UBERON:0000924!1.92e-24!102;UBERON:0006601!1.92e-24!102;UBERON:0002616!2.88e-24!49;UBERON:0000033!3.80e-22!63;UBERON:0003080!2.87e-19!40;UBERON:0003056!1.40e-18!49;UBERON:0002780!1.89e-18!39;UBERON:0001890!1.89e-18!39;UBERON:0006240!1.89e-18!39;UBERON:0002020!3.19e-17!34;UBERON:0002791!1.93e-13!29;UBERON:0003528!1.93e-13!29;UBERON:0001893!1.93e-13!29;UBERON:0007811!2.06e-11!86;UBERON:0000956!8.97e-10!21;UBERON:0001869!8.97e-10!21;UBERON:0000203!8.97e-10!21;UBERON:0000153!2.86e-09!94;UBERON:0002619!3.30e-08!17;UBERON:0003076!3.31e-08!12;UBERON:0003057!3.31e-08!12;UBERON:0002021!5.53e-08!10;UBERON:0000411!5.53e-08!10;UBERON:0001950!5.53e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.09e-39,73;UBERON:0001016,2.25e-38,75;UBERON:0000073,2.61e-37,54;UBERON:0001049,2.86e-34,52;UBERON:0005068,2.86e-34,52;UBERON:0006241,2.86e-34,52;UBERON:0007135,2.86e-34,52;UBERON:0004121,2.86e-28,95;UBERON:0000924,2.86e-28,95;UBERON:0006601,2.86e-28,95;UBERON:0002020,3.45e-27,34;UBERON:0002346,2.85e-26,64;UBERON:0003075,2.85e-26,64;UBERON:0007284,2.85e-26,64;UBERON:0000955,3.53e-26,47;UBERON:0006238,3.53e-26,47;UBERON:0002616,1.19e-24,46;UBERON:0010371,5.29e-22,73;UBERON:0003080,6.99e-20,40;UBERON:0003528,4.10e-19,29;UBERON:0002791,4.10e-19,29;UBERON:0001893,4.10e-19,29;UBERON:0002780,2.19e-18,39;UBERON:0001890,2.19e-18,39;UBERON:0006240,2.19e-18,39;UBERON:0003076,5.77e-16,12;UBERON:0003057,5.77e-16,12;UBERON:0010314,9.54e-16,92;UBERON:0003056,3.84e-15,49;UBERON:0002021,4.71e-14,10;UBERON:0000411,4.71e-14,10;UBERON:0001950,4.71e-14,10;UBERON:0002240,3.22e-12,6;UBERON:0005174,3.22e-12,6;UBERON:0001137,3.22e-12,6;UBERON:0002619,2.87e-11,17;UBERON:0000025,3.92e-11,114;UBERON:0000956,1.22e-10,21;UBERON:0001869,1.22e-10,21;UBERON:0000203,1.22e-10,21;UBERON:0002420,1.40e-10,8;UBERON:0007245,1.40e-10,8;UBERON:0010009,1.40e-10,8;UBERON:0010011,1.40e-10,8;UBERON:0000454,1.40e-10,8;UBERON:0001948,1.91e-10,5;UBERON:0002315,1.91e-10,5;UBERON:0004111,7.07e-10,122;UBERON:0000369,6.76e-09,5;UBERON:0002435,6.76e-09,5;UBERON:0000204,6.76e-09,5;UBERON:0010082,6.76e-09,5;UBERON:0011216,7.16e-09,194;UBERON:0002257,4.49e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0,0.419959264876088,0,0,0,0,0,0,0,1.82084814773638,1.5869729378161,1.90149421051854,0,0,0,0,0,4.19440154725767,8.83702102239575,0.103689612308478,0.540023753326763,0.841299845405528,3.71346279724945,1.98781686856452,0.979926393719632,0.287536413054709,0,7.70811166995721,1.78762273319263,1.68967186581868,1.97829431595291,1.46380229763855,1.04182674111352,2.51264699101243,0,2.44477196442896,5.89257170947335,3.84403538157578,2.23679334990361,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,0,0,0.691846491768175,0.150722640552623,0.23517741427141,0.251333182659351,0,0.433798070759735,0,0,0,0,0,5.27005434620785,47.9632958602812,0.255457055208591,0,0,0,4.04434726393021,2.74500361691176,2.26177833803156,4.17178368461463,4.09144731728529,4.1557608911912,1.94689515681309,0.203678727700633,0,0,0,0.130120442962704,0,0,0.150704817835715,0.95251098811859,0.512454881139399,0.374806898238915,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.134206418760372,2.10289948564127,1.64647379806855,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0.420814919341911,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043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| ||
|EntrezGene=18190 | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=E9PUN1,Q3TQ54 | |||
|association_with_transcript=114bp_to_ENSMUST00000113459,uc008giy.1_5end | |||
|description=CAGE_peak_6_at_Nrxn2_5end | |||
|id=chr19:6497949..6497979,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.68e-11!23;CL:0000337!1.68e-11!23;CL:0000221!2.55e-07!44;CL:0000133!2.55e-07!44;CL:0002319!3.12e-07!43;CL:0000540!8.58e-07!33;CL:0000047!8.58e-07!33;CL:0000031!8.58e-07!33;CL:0000404!8.58e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.61e-17,23;CL:0000337,1.61e-17,23;CL:0000540,5.13e-11,33;CL:0000047,5.13e-11,33;CL:0000031,5.13e-11,33;CL:0000404,5.13e-11,33;CL:0002319,2.46e-10,43;CL:0000221,5.33e-10,44;CL:0000133,5.33e-10,44;CL:0000393,9.69e-09,39;CL:0000211,9.69e-09,39;CL:0002612,4.49e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.29e-27!73;UBERON:0005743!2.29e-27!73;UBERON:0001049!5.92e-27!52;UBERON:0005068!5.92e-27!52;UBERON:0006241!5.92e-27!52;UBERON:0007135!5.92e-27!52;UBERON:0000073!1.35e-26!75;UBERON:0001016!1.35e-26!75;UBERON:0002346!5.24e-26!71;UBERON:0003075!5.24e-26!71;UBERON:0007284!5.24e-26!71;UBERON:0000955!4.38e-25!50;UBERON:0006238!4.38e-25!50;UBERON:0004121!1.92e-24!102;UBERON:0000924!1.92e-24!102;UBERON:0006601!1.92e-24!102;UBERON:0002616!2.88e-24!49;UBERON:0000033!3.80e-22!63;UBERON:0003080!2.87e-19!40;UBERON:0003056!1.40e-18!49;UBERON:0002780!1.89e-18!39;UBERON:0001890!1.89e-18!39;UBERON:0006240!1.89e-18!39;UBERON:0002020!3.19e-17!34;UBERON:0002791!1.93e-13!29;UBERON:0003528!1.93e-13!29;UBERON:0001893!1.93e-13!29;UBERON:0007811!2.06e-11!86;UBERON:0000956!8.97e-10!21;UBERON:0001869!8.97e-10!21;UBERON:0000203!8.97e-10!21;UBERON:0000153!2.86e-09!94;UBERON:0002619!3.30e-08!17;UBERON:0003076!3.31e-08!12;UBERON:0003057!3.31e-08!12;UBERON:0002021!5.53e-08!10;UBERON:0000411!5.53e-08!10;UBERON:0001950!5.53e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.09e-39,73;UBERON:0001016,2.25e-38,75;UBERON:0000073,2.61e-37,54;UBERON:0001049,2.86e-34,52;UBERON:0005068,2.86e-34,52;UBERON:0006241,2.86e-34,52;UBERON:0007135,2.86e-34,52;UBERON:0004121,2.86e-28,95;UBERON:0000924,2.86e-28,95;UBERON:0006601,2.86e-28,95;UBERON:0002020,3.45e-27,34;UBERON:0002346,2.85e-26,64;UBERON:0003075,2.85e-26,64;UBERON:0007284,2.85e-26,64;UBERON:0000955,3.53e-26,47;UBERON:0006238,3.53e-26,47;UBERON:0002616,1.19e-24,46;UBERON:0010371,5.29e-22,73;UBERON:0003080,6.99e-20,40;UBERON:0003528,4.10e-19,29;UBERON:0002791,4.10e-19,29;UBERON:0001893,4.10e-19,29;UBERON:0002780,2.19e-18,39;UBERON:0001890,2.19e-18,39;UBERON:0006240,2.19e-18,39;UBERON:0003076,5.77e-16,12;UBERON:0003057,5.77e-16,12;UBERON:0010314,9.54e-16,92;UBERON:0003056,3.84e-15,49;UBERON:0002021,4.71e-14,10;UBERON:0000411,4.71e-14,10;UBERON:0001950,4.71e-14,10;UBERON:0002240,3.22e-12,6;UBERON:0005174,3.22e-12,6;UBERON:0001137,3.22e-12,6;UBERON:0002619,2.87e-11,17;UBERON:0000025,3.92e-11,114;UBERON:0000956,1.22e-10,21;UBERON:0001869,1.22e-10,21;UBERON:0000203,1.22e-10,21;UBERON:0002420,1.40e-10,8;UBERON:0007245,1.40e-10,8;UBERON:0010009,1.40e-10,8;UBERON:0010011,1.40e-10,8;UBERON:0000454,1.40e-10,8;UBERON:0001948,1.91e-10,5;UBERON:0002315,1.91e-10,5;UBERON:0004111,7.07e-10,122;UBERON:0000369,6.76e-09,5;UBERON:0002435,6.76e-09,5;UBERON:0000204,6.76e-09,5;UBERON:0010082,6.76e-09,5;UBERON:0011216,7.16e-09,194;UBERON:0002257,4.49e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0,0.419959264876088,0,0,0,0,0,0,0,1.82084814773638,1.5869729378161,1.90149421051854,0,0,0,0,0,4.19440154725767,8.83702102239575,0.103689612308478,0.540023753326763,0.841299845405528,3.71346279724945,1.98781686856452,0.979926393719632,0.287536413054709,0,7.70811166995721,1.78762273319263,1.68967186581868,1.97829431595291,1.46380229763855,1.04182674111352,2.51264699101243,0,2.44477196442896,5.89257170947335,3.84403538157578,2.23679334990361,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,0,0,0.691846491768175,0.150722640552623,0.23517741427141,0.251333182659351,0,0.433798070759735,0,0,0,0,0,5.27005434620785,47.9632958602812,0.255457055208591,0,0,0,4.04434726393021,2.74500361691176,2.26177833803156,4.17178368461463,4.09144731728529,4.1557608911912,1.94689515681309,0.203678727700633,0,0,0,0.130120442962704,0,0,0.150704817835715,0.95251098811859,0.512454881139399,0.374806898238915,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.134206418760372,2.10289948564127,1.64647379806855,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0.420814919341911,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0,0,0,0,0,0,0,2.40825884981688,2.46144541843627,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,2.89189184779626,0,0.35613120733451,0.325773918707152,0.494910368917606,1.32745138339963,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,0.540183282093931,0.776152102696527,0.214337035031592,0.532020700926821,0.356737635204141,0.987294123612726,2.13125464380219,0,0,0.220528398054962,0.32977250588296,0.322928853391811,0,0.477489376012546,0,0.291480836629851,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0.404593039154462,0.0826534557253359,0,0,0,0,0.299033092087958,0.330916980914195,0,0,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0.36630324853453,0.428736758158132,0,3.3885110557024,1.84130094602871,1.71868654031819,2.23409137046794,1.37016503954128,0.755393897389701,2.70009000092722,3.15224842256954,1.81256963593682,3.62432218226274,0.103787347584177,1.59609949360412,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0,0.640251524048693,0.34461281373368,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.70990322463735,0.238436189947321,0.581385666529314,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.830445126869219,0.197008964751127,0,0.309873682371932,0.771626443924566,1.49886346762768,0.701794825336225,0.429742108096597,1.3390183244819,0,0.231867835620421 | |||
|short_description=p6@Nrxn2 | |||
}} |
Revision as of 18:22, 13 September 2013
Short description: | p6@Nrxn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Nrxn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | 114bp_to_ENSMUST00000113459, uc008giy.1_5end |
EntrezGene: | Nrxn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.61e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-17 | 23 |
neuron | 5.13e-11 | 33 |
neuronal stem cell | 5.13e-11 | 33 |
neuroblast | 5.13e-11 | 33 |
electrically signaling cell | 5.13e-11 | 33 |
neural cell | 2.46e-10 | 43 |
ectodermal cell | 5.33e-10 | 44 |
neurectodermal cell | 5.33e-10 | 44 |
electrically responsive cell | 9.69e-09 | 39 |
electrically active cell | 9.69e-09 | 39 |
neuron of the ventral spinal cord | 4.49e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.