FFCP PHASE1:Mm9::chr19:53385060..53385069,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17859|HGNC=|MCL_coexpression_id=163|UniProt=Q3U3X2,Q6P2L3|association_with_transcript=64bp_to_ENSMUST00000003870,NM_001008542,uc008hwo.1_5end|description=CAGE_peak_6_at_Mxi1_5end|id=chr19:53385060..53385069,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000075,6.53e-08,7;CL:0000239,4.16e-07,6;CL:0000677,4.16e-07,6;CL:0000584,4.16e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.45e-11,31;UBERON:0000344,5.32e-09,15;UBERON:0001242,4.26e-07,13;UBERON:0001262,4.26e-07,13;UBERON:0004786,4.26e-07,13;UBERON:0004923,8.24e-07,24|phase1_expression=1.28119077683835,15.7038933437712,6.82498859084304,4.83942738090928,4.50806156951712,0.839396359559449,1.16806320297763,0.129123323441576,0.281577444303333,0.70219357896598,0,0,0,0.262261207256992,0,0,0.699561878128147,0,0.137114433605739,0,0.510259740906419,0.992909512008853,0,1.43993180514066,1.60586496747019,3.44539178469012,0.430761996159075,2.37018355954478,1.71021077510736,2.26827116783938,0.221730510655305,0,0,0,0.288851619751275,0.664938581433969,0,1.67412652294763,0.7813353445238,1.57057123192139,4.1176204162171,5.46436387966757,2.91306211818692,0.251793635951155,0.202753862439029,0,3.12956537739216,0,0.219686182734472,0.388859798148567,0.419959264876088,0,0,0,0.336093799142464,0,0,0.515672092277442,0.606949382578793,1.05798195854407,1.90149421051854,1.0165335962074,1.77858959222228,0.899899717281399,0.988866362566974,0,2.09720077362883,1.53687322128622,1.24427534770173,0.810035629990144,1.47227472945967,1.14260393761521,0.662605622854841,1.34739879136449,0.191690942036473,1.83843757322004,0,0.255374676170375,0.307213066512487,0.527545150920775,0.640413505216868,1.04182674111352,0.558365998002762,0.56276261003168,0.61119299110724,0.294628585473668,0.427115042397309,0.559198337475902,0.530083353332288,0.906858721281426,0.579728977403356,0.860423876981386,0,0,0,0,0.140444420131752,0.852151612890289,0,0.35333957451034,1.12674735821344,1.28326477414318,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.301445281105245,0.470354828542819,0.251333182659351,1.73036477414062,0.144599356919912,0,0.485300549842228,0,0.969750506270444,0,2.34224637609238,1.46612694769419,2.55457055208591,0.479260498023681,0,0.381210681219194,0.299581278809645,0.915001205637253,0.502617408451458,0.347648640384553,0.255715457330331,0.62336413367868,0.162241263067758,0,0.373220911830279,0.252722758433675,0.420883711772948,0.520481771850815,1.14951052216736,0.720248519221397,0.753524089178575,0.884474488967262,0.640568601424249,1.03071897015702,0.517406741478031,0.431135985865684,0.378212160335639,0.351902248327898,0.219195732427575,0,0.696504333044333,0.411564272815887,0,0,0.257347907114715,0,0.828503090142008,0.703578179943289,0.180062061461015,0.23674473558521,1.18058539048442,0.925602677324269,1.62773761325285,0.268273401399619,0.934122738937356,0.658239399653922,0.492502392237286,0.648550476366846,0.146199987425332,0,0.134206418760372,0.630869845692382,0.92614151141356,3.63460661282178,1.32225283331772,0,0.232236671860439,0.128867461322093,0.403367049246685,0,0.760902504450237,1.89811624617805,2.47048432086016,1.75934646160189,1.1937388322469,1.9496408711912,0.898819408654221,2.59365659849633,2.38969527905241,0.758671603812327,0.571242563048644,0,0,0.387904974335251,0.350679099451593,0.379419222745544,0,0.31399745568275,0.370191491765402,0,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0,0,0.575392274901621,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0.568474235311454,0.325929952884052,0.678980343100753,0.469380496577004,0.670025029767263,0.476087281772027,0,0,0,0.159454768657487,0,0.345369963731791,0,1.50791283939272,0,0.983528546038072,0.275936746304732,0.160550589987792,0.35163505977661,0.491804836130026,0.252470927204373,0.315508219416257,0.390438744296638,1.50796378412959,0.716906393857656,0.222798674082394,0.849229592366497,0.404810701674894,0.292255857911312,1.18586333383957,2.24924921495265,0.851640511249612,0.534196811001766,0.488660878060728,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0,0,0.775284879504663,0,0.356497378384721,0,0,0,0,1.26042765821917,0.776152102696527,0.214337035031592,1.59606210278046,0.713475270408282,0.164549020602121,0,0.23467170806371,1.0591603543191,0,1.48397627647332,1.13025098687134,1.20625849856312,0.835606408021955,0.820704498725306,0.874442509889552,0.741701208042039,0.170870880797853,0,0.925972636848558,0.188368457004691,0.683471138605126,0.457556346413045,0.339956859987711,0.559805809294632,0.967399816630967,0.954670618015114,0.316335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0,0.404593039154462,0.495920734352016,0.785267825952089,1.68499465279331,0,1.69107881605257,0.299033092087958,0.165458490457098,0.194451188344048,0,0,0.821500670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| ||
|EntrezGene=17859 | |||
|HGNC= | |||
|MCL_coexpression_id=163 | |||
|UniProt=Q3U3X2,Q6P2L3 | |||
|association_with_transcript=64bp_to_ENSMUST00000003870,NM_001008542,uc008hwo.1_5end | |||
|description=CAGE_peak_6_at_Mxi1_5end | |||
|id=chr19:53385060..53385069,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000075,6.53e-08,7;CL:0000239,4.16e-07,6;CL:0000677,4.16e-07,6;CL:0000584,4.16e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.45e-11,31;UBERON:0000344,5.32e-09,15;UBERON:0001242,4.26e-07,13;UBERON:0001262,4.26e-07,13;UBERON:0004786,4.26e-07,13;UBERON:0004923,8.24e-07,24 | |||
|phase1_expression=1.28119077683835,15.7038933437712,6.82498859084304,4.83942738090928,4.50806156951712,0.839396359559449,1.16806320297763,0.129123323441576,0.281577444303333,0.70219357896598,0,0,0,0.262261207256992,0,0,0.699561878128147,0,0.137114433605739,0,0.510259740906419,0.992909512008853,0,1.43993180514066,1.60586496747019,3.44539178469012,0.430761996159075,2.37018355954478,1.71021077510736,2.26827116783938,0.221730510655305,0,0,0,0.288851619751275,0.664938581433969,0,1.67412652294763,0.7813353445238,1.57057123192139,4.1176204162171,5.46436387966757,2.91306211818692,0.251793635951155,0.202753862439029,0,3.12956537739216,0,0.219686182734472,0.388859798148567,0.419959264876088,0,0,0,0.336093799142464,0,0,0.515672092277442,0.606949382578793,1.05798195854407,1.90149421051854,1.0165335962074,1.77858959222228,0.899899717281399,0.988866362566974,0,2.09720077362883,1.53687322128622,1.24427534770173,0.810035629990144,1.47227472945967,1.14260393761521,0.662605622854841,1.34739879136449,0.191690942036473,1.83843757322004,0,0.255374676170375,0.307213066512487,0.527545150920775,0.640413505216868,1.04182674111352,0.558365998002762,0.56276261003168,0.61119299110724,0.294628585473668,0.427115042397309,0.559198337475902,0.530083353332288,0.906858721281426,0.579728977403356,0.860423876981386,0,0,0,0,0.140444420131752,0.852151612890289,0,0.35333957451034,1.12674735821344,1.28326477414318,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.301445281105245,0.470354828542819,0.251333182659351,1.73036477414062,0.144599356919912,0,0.485300549842228,0,0.969750506270444,0,2.34224637609238,1.46612694769419,2.55457055208591,0.479260498023681,0,0.381210681219194,0.299581278809645,0.915001205637253,0.502617408451458,0.347648640384553,0.255715457330331,0.62336413367868,0.162241263067758,0,0.373220911830279,0.252722758433675,0.420883711772948,0.520481771850815,1.14951052216736,0.720248519221397,0.753524089178575,0.884474488967262,0.640568601424249,1.03071897015702,0.517406741478031,0.431135985865684,0.378212160335639,0.351902248327898,0.219195732427575,0,0.696504333044333,0.411564272815887,0,0,0.257347907114715,0,0.828503090142008,0.703578179943289,0.180062061461015,0.23674473558521,1.18058539048442,0.925602677324269,1.62773761325285,0.268273401399619,0.934122738937356,0.658239399653922,0.492502392237286,0.648550476366846,0.146199987425332,0,0.134206418760372,0.630869845692382,0.92614151141356,3.63460661282178,1.32225283331772,0,0.232236671860439,0.128867461322093,0.403367049246685,0,0.760902504450237,1.89811624617805,2.47048432086016,1.75934646160189,1.1937388322469,1.9496408711912,0.898819408654221,2.59365659849633,2.38969527905241,0.758671603812327,0.571242563048644,0,0,0.387904974335251,0.350679099451593,0.379419222745544,0,0.31399745568275,0.370191491765402,0,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0,0,0.575392274901621,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0.568474235311454,0.325929952884052,0.678980343100753,0.469380496577004,0.670025029767263,0.476087281772027,0,0,0,0.159454768657487,0,0.345369963731791,0,1.50791283939272,0,0.983528546038072,0.275936746304732,0.160550589987792,0.35163505977661,0.491804836130026,0.252470927204373,0.315508219416257,0.390438744296638,1.50796378412959,0.716906393857656,0.222798674082394,0.849229592366497,0.404810701674894,0.292255857911312,1.18586333383957,2.24924921495265,0.851640511249612,0.534196811001766,0.488660878060728,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0,0,0.775284879504663,0,0.356497378384721,0,0,0,0,1.26042765821917,0.776152102696527,0.214337035031592,1.59606210278046,0.713475270408282,0.164549020602121,0,0.23467170806371,1.0591603543191,0,1.48397627647332,1.13025098687134,1.20625849856312,0.835606408021955,0.820704498725306,0.874442509889552,0.741701208042039,0.170870880797853,0,0.925972636848558,0.188368457004691,0.683471138605126,0.457556346413045,0.339956859987711,0.559805809294632,0.967399816630967,0.954670618015114,0.316335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0,0.404593039154462,0.495920734352016,0.785267825952089,1.68499465279331,0,1.69107881605257,0.299033092087958,0.165458490457098,0.194451188344048,0,0,0.821500670520278,0.5208175393758,2.62148361064277,3.14059357073808,1.44015003128933,0.316011120628178,0.405450430580328,0.205421914329655,0,0.179026695667481,0.79472541912506,0.240390899039938,0.443068581523732,0.302899349844443,0.381034033274999,0.100826185136841,0.779663045918019,0,0.584384510907845,0,0,0,0,0.579568782096571,0.187682475451182,0.915758121336325,0.428736758158132,0,0.564751842617067,0,0,0.515559547031063,0,0.755393897389701,0,0,0,1.03552062350364,0.726511433089237,0.399024873401031,0.512200817262403,0.243106717068294,0.838452650511929,0.735374033800057,0.666740183404846,0,0.64183841918363,0,0.25347929989024,0.754505365544305,0.280924522409647,0.320125762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| |||
|short_description=p6@Mxi1 | |||
}} | |||
Revision as of 18:01, 13 September 2013
| Short description: | p6@Mxi1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Mxi1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:163 |
| Association with transcript: | 64bp_to_ENSMUST00000003870, NM_001008542, uc008hwo.1_5end |
| EntrezGene: | Mxi1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| columnar/cuboidal epithelial cell | 6.53e-08 | 7 |
| brush border epithelial cell | 4.16e-07 | 6 |
| gut absorptive cell | 4.16e-07 | 6 |
| enterocyte | 4.16e-07 | 6 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 6.45e-11 | 31 |
| mucosa | 5.32e-09 | 15 |
| intestinal mucosa | 4.26e-07 | 13 |
| wall of intestine | 4.26e-07 | 13 |
| gastrointestinal system mucosa | 4.26e-07 | 13 |
| organ component layer | 8.24e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
