Personal tools

FFCP PHASE1:Mm9::chr18:20217999..20218020,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=13506|HGNC=|MCL_coexpression_id=109|UniProt=D6RDD6,P55292,Q544V1|association_with_transcript=0bp_to_ENSMUST00000128464,NM_013505,uc008eed.1,uc008eee.1_5end|description=CAGE_peak_2_at_Dsc2_5end|id=chr18:20217999..20218020,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,1.72e-07,25;CL:0000223,6.66e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!5.44e-26!130;UBERON:0000925!5.44e-26!130;UBERON:0006595!5.44e-26!130;UBERON:0001007!1.14e-24!128;UBERON:0001555!1.14e-24!128;UBERON:0007026!1.14e-24!128;UBERON:0004921!2.58e-23!126;UBERON:0004185!2.58e-23!126;UBERON:0005409!3.60e-17!59;UBERON:0000160!1.17e-14!43;UBERON:0000077!5.29e-10!97;UBERON:0000344!1.67e-09!15;UBERON:0001041!1.36e-08!92;UBERON:0001242!2.88e-08!13;UBERON:0000060!2.88e-08!13;UBERON:0001262!2.88e-08!13;UBERON:0004786!2.88e-08!13;UBERON:0003929!3.81e-08!55;UBERON:0004923!2.63e-07!24;UBERON:0000481!4.96e-07!230;UBERON:0009854!7.55e-07!23;UBERON:0009856!7.55e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.26e-23,118;UBERON:0000925,4.26e-23,118;UBERON:0006595,4.26e-23,118;UBERON:0001007,1.01e-21,116;UBERON:0001555,1.01e-21,116;UBERON:0007026,1.01e-21,116;UBERON:0004921,2.55e-20,114;UBERON:0005409,5.88e-18,47;UBERON:0000160,1.66e-17,31;UBERON:0000344,6.37e-11,15;UBERON:0001242,1.82e-09,13;UBERON:0001262,1.82e-09,13;UBERON:0004786,1.82e-09,13;UBERON:0003929,9.36e-09,55;UBERON:0004923,1.94e-07,24|phase1_expression=0,23.3813523118372,17.7449703361919,14.8207463540347,14.0250804384977,14.1018588405987,12.1478573109673,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,19.679068003589,22.4821095445827,22.9692785646008,17.6612418425221,20.4697671051595,29.0735831768252,26.2111334950328,20.399206980288,0,0,0,5.48818077527422,4.82080471539628,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,3.76823835312181,1.72084775396277,7.47968467078526,4.85732872474035,5.19821133958135,4.48026887097336,4.91555470461132,0,0,0,0,0,0,0,4.32982082022428,3.29367825117628,3.53867111510348,6.50848114398642,0,0,0.520455980298408,0,0.691846491768175,0,0.352766121407114,0.125666591329675,3.21353458054686,0,0,0,0,0,14.9113408974498,0,0,18.9038220854358,0,0,0,0,0,0,0,0,0,0.162241263067758,0.305518091550949,0,1.51633655060205,5.47148825304832,0.260240885925407,1.14951052216736,1.62055916824814,1.50704817835715,1.49680298132921,1.7935920839879,1.21812241927647,4.13925393182425,0.431135985865684,1.13463648100692,0.703804496655795,0.876782929710299,1.94633074457919,0,0.205782136407943,0.995171334092466,0,0,0,3.10688658803253,0.703578179943289,0.900310307305074,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.987359099480883,1.31333971263276,1.86458261955468,2.04679982395465,0.878200461164203,3.22095405024892,0,0,42.2936042219261,11.6358249331959,0.426576501070468,2.09013004674395,4.89696353023955,4.84040459096022,5.33707305227689,6.65789691393957,21.8283368310475,7.08205505313247,10.5560787696113,7.95825888164603,7.01870713628832,12.5834717211591,19.2362864388478,19.3167035056736,0.189667900953082,1.02823661348756,0,1.22190796707189,0.387904974335251,0.49095073923223,1.01178459398812,0.147610147979602,0.470996183524124,0.123397163921801,3.85388415213294,0.333690211432188,0.589676985339609,0.224862112384854,1.21716072833102,1.4470629585145,3.56476192493988,2.30156909960649,3.72911021582581,6.58947391651396,10.0637744569148,12.6527922207291,15.9139213288426,7.82994521636046,3.22915344339442,10.1313139486307,0.369506380333209,1.32643988239339,0.488894929326078,0.339490171550376,0,0.167506257441816,0.238043640886014,0.780534591431195,0.315270288212382,0.221464689648775,0.159454768657487,4.58817281204066,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,1.27746076687442,0,0.162886959353576,0.164970122972535,1.32745138339963,2.91336763385978,1.51161778482376,1.88605079755898,0.590603785761546,0.922305443831782,2.84271122485043,0.363533729477506,1.78248689192361,0.632073515871632,0,2.06271086496374,0.680879211507576,0.36012218806262,0.388076051348264,0.428674070063185,0.177340233642274,0.178368817602071,0.493647061806363,0.304464949114599,24.6405293466896,12.2862601101016,0.220528398054962,21.9298716412168,0.322928853391811,1.68876189798836,39.1541288330288,134.59553779095,11.9507143018239,0,0.170870880797853,0.619160603889667,0,0,0.136694227721025,0.228778173206523,0,0,0,17.184071124272,0.949007980743406,6.30290348093231,18.5769186213498,33.6632156583295,35.1563727631346,25.4893614667311,24.2174625275234,39.2633912976044,13.6095721956383,18.6401793926078,0,0,0.165458490457098,0,0.129159823477731,0,0,0.39061315453185,0,0,0,0.948033361884535,20.2725215290164,20.9530352616248,11.6928740680016,7.51912121803422,3.9736270956253,4.08664528367894,4.72606486958647,2.62512769865184,2.28620419965,1.31074040677893,2.14407337627455,0.577271049841977,1.28564592399726,65.7518112484113,1.10992976687032,1.97370484540847,2.3503846290971,1.9318959403219,18.9559300205694,15.7510396869848,315.335885625306,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,1.19513524027894,1.94485373654635,1.04806581313991,1.47074806760011,0.666740183404846,2.06035057238894,1.28367683836726,1.01078884705519,1.01391719956096,1.13175804831646,0.842773567228942,1.53660365771686,1.20614484806788,2.38146845641537,0.927074607558844,1.35036454324594,0,1.91358596174717,1.02860775715625,1.06485483695602,2.14592570952589,1.0174249164263,2.25862512996793,0.761531471025089,1.46342378298218,1.31534855718921,1.22223702461276,2.24456908663095,1.18635018124174,1.37906275325789,1.22769312950907,1.54936841185966,3.2794123866794,4.24677982494508,3.27504251823572,1.71896843238639,0.191288332068843,2.64709702943419,0.463735671240843|short_description=p2@Dsc2}}
|EntrezGene=13506
|HGNC=
|MCL_coexpression_id=109
|UniProt=D6RDD6,P55292,Q544V1
|association_with_transcript=0bp_to_ENSMUST00000128464,NM_013505,uc008eed.1,uc008eee.1_5end
|description=CAGE_peak_2_at_Dsc2_5end
|id=chr18:20217999..20218020,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,1.72e-07,25;CL:0000223,6.66e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!5.44e-26!130;UBERON:0000925!5.44e-26!130;UBERON:0006595!5.44e-26!130;UBERON:0001007!1.14e-24!128;UBERON:0001555!1.14e-24!128;UBERON:0007026!1.14e-24!128;UBERON:0004921!2.58e-23!126;UBERON:0004185!2.58e-23!126;UBERON:0005409!3.60e-17!59;UBERON:0000160!1.17e-14!43;UBERON:0000077!5.29e-10!97;UBERON:0000344!1.67e-09!15;UBERON:0001041!1.36e-08!92;UBERON:0001242!2.88e-08!13;UBERON:0000060!2.88e-08!13;UBERON:0001262!2.88e-08!13;UBERON:0004786!2.88e-08!13;UBERON:0003929!3.81e-08!55;UBERON:0004923!2.63e-07!24;UBERON:0000481!4.96e-07!230;UBERON:0009854!7.55e-07!23;UBERON:0009856!7.55e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.26e-23,118;UBERON:0000925,4.26e-23,118;UBERON:0006595,4.26e-23,118;UBERON:0001007,1.01e-21,116;UBERON:0001555,1.01e-21,116;UBERON:0007026,1.01e-21,116;UBERON:0004921,2.55e-20,114;UBERON:0005409,5.88e-18,47;UBERON:0000160,1.66e-17,31;UBERON:0000344,6.37e-11,15;UBERON:0001242,1.82e-09,13;UBERON:0001262,1.82e-09,13;UBERON:0004786,1.82e-09,13;UBERON:0003929,9.36e-09,55;UBERON:0004923,1.94e-07,24
|phase1_expression=0,23.3813523118372,17.7449703361919,14.8207463540347,14.0250804384977,14.1018588405987,12.1478573109673,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,19.679068003589,22.4821095445827,22.9692785646008,17.6612418425221,20.4697671051595,29.0735831768252,26.2111334950328,20.399206980288,0,0,0,5.48818077527422,4.82080471539628,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,3.76823835312181,1.72084775396277,7.47968467078526,4.85732872474035,5.19821133958135,4.48026887097336,4.91555470461132,0,0,0,0,0,0,0,4.32982082022428,3.29367825117628,3.53867111510348,6.50848114398642,0,0,0.520455980298408,0,0.691846491768175,0,0.352766121407114,0.125666591329675,3.21353458054686,0,0,0,0,0,14.9113408974498,0,0,18.9038220854358,0,0,0,0,0,0,0,0,0,0.162241263067758,0.305518091550949,0,1.51633655060205,5.47148825304832,0.260240885925407,1.14951052216736,1.62055916824814,1.50704817835715,1.49680298132921,1.7935920839879,1.21812241927647,4.13925393182425,0.431135985865684,1.13463648100692,0.703804496655795,0.876782929710299,1.94633074457919,0,0.205782136407943,0.995171334092466,0,0,0,3.10688658803253,0.703578179943289,0.900310307305074,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.987359099480883,1.31333971263276,1.86458261955468,2.04679982395465,0.878200461164203,3.22095405024892,0,0,42.2936042219261,11.6358249331959,0.426576501070468,2.09013004674395,4.89696353023955,4.84040459096022,5.33707305227689,6.65789691393957,21.8283368310475,7.08205505313247,10.5560787696113,7.95825888164603,7.01870713628832,12.5834717211591,19.2362864388478,19.3167035056736,0.189667900953082,1.02823661348756,0,1.22190796707189,0.387904974335251,0.49095073923223,1.01178459398812,0.147610147979602,0.470996183524124,0.123397163921801,3.85388415213294,0.333690211432188,0.589676985339609,0.224862112384854,1.21716072833102,1.4470629585145,3.56476192493988,2.30156909960649,3.72911021582581,6.58947391651396,10.0637744569148,12.6527922207291,15.9139213288426,7.82994521636046,3.22915344339442,10.1313139486307,0.369506380333209,1.32643988239339,0.488894929326078,0.339490171550376,0,0.167506257441816,0.238043640886014,0.780534591431195,0.315270288212382,0.221464689648775,0.159454768657487,4.58817281204066,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,1.27746076687442,0,0.162886959353576,0.164970122972535,1.32745138339963,2.91336763385978,1.51161778482376,1.88605079755898,0.590603785761546,0.922305443831782,2.84271122485043,0.363533729477506,1.78248689192361,0.632073515871632,0,2.06271086496374,0.680879211507576,0.36012218806262,0.388076051348264,0.428674070063185,0.177340233642274,0.178368817602071,0.493647061806363,0.304464949114599,24.6405293466896,12.2862601101016,0.220528398054962,21.9298716412168,0.322928853391811,1.68876189798836,39.1541288330288,134.59553779095,11.9507143018239,0,0.170870880797853,0.619160603889667,0,0,0.136694227721025,0.228778173206523,0,0,0,17.184071124272,0.949007980743406,6.30290348093231,18.5769186213498,33.6632156583295,35.1563727631346,25.4893614667311,24.2174625275234,39.2633912976044,13.6095721956383,18.6401793926078,0,0,0.165458490457098,0,0.129159823477731,0,0,0.39061315453185,0,0,0,0.948033361884535,20.2725215290164,20.9530352616248,11.6928740680016,7.51912121803422,3.9736270956253,4.08664528367894,4.72606486958647,2.62512769865184,2.28620419965,1.31074040677893,2.14407337627455,0.577271049841977,1.28564592399726,65.7518112484113,1.10992976687032,1.97370484540847,2.3503846290971,1.9318959403219,18.9559300205694,15.7510396869848,315.335885625306,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,1.19513524027894,1.94485373654635,1.04806581313991,1.47074806760011,0.666740183404846,2.06035057238894,1.28367683836726,1.01078884705519,1.01391719956096,1.13175804831646,0.842773567228942,1.53660365771686,1.20614484806788,2.38146845641537,0.927074607558844,1.35036454324594,0,1.91358596174717,1.02860775715625,1.06485483695602,2.14592570952589,1.0174249164263,2.25862512996793,0.761531471025089,1.46342378298218,1.31534855718921,1.22223702461276,2.24456908663095,1.18635018124174,1.37906275325789,1.22769312950907,1.54936841185966,3.2794123866794,4.24677982494508,3.27504251823572,1.71896843238639,0.191288332068843,2.64709702943419,0.463735671240843
|short_description=p2@Dsc2
}}

Revision as of 15:45, 13 September 2013

Short description:p2@Dsc2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Dsc2_5end
Coexpression cluster:MCL_coexpression_mm9:109
Association with transcript: 0bp_to_ENSMUST00000128464, NM_013505, uc008eed.1, uc008eee.1_5end
EntrezGene:Dsc2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Dsc2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I523.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I617.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.82
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.10
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.15
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D222.48
GP2+ M cell, pool1.CNhs13228.11845-124H922.97
GP2+ M cell, pool2.CNhs13231.11846-124I117.66
GP2+ M cell, pool3.CNhs13240.11847-124I220.47
Ileum epithelium, pool1.CNhs13199.10252-104B929.07
Ileum epithelium, pool2.CNhs13232.10253-104C126.21
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C820.40
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.51
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H718.90
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G45.47
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.86
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I342.29
intestine, adult.CNhs10496.178-9A311.64
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F76.66
intestine, neonate N00.CNhs11126.644-26D121.83
intestine, neonate N01.CNhs11192.1322-23E97.08
intestine, neonate N06.CNhs11102.688-20B810.56
intestine, neonate N07.CNhs11095.720-20F27.96
intestine, neonate N10.CNhs11098.755-23A57.02
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E319.24
intestine, neonate N30.CNhs11131.1384-42G119.32
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G26.59
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H212.65
liver, neonate N10.CNhs11115.751-24B915.91
liver, neonate N20.CNhs11220.823-25A37.83
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D110.13
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A44.59
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I724.64
placenta, adult pregnant day17.CNhs10464.577-18G312.29
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C321.93
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I539.15
skin, neonate N10.CNhs11108.762-6C4134.60
small intestine, neonate N16.CNhs11114.790-21I111.95
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G86.30
stomach, embryo E16.CNhs11022.459-17D418.58
stomach, embryo E17.CNhs11006.1035-18D533.66
stomach, embryo E18.CNhs10999.1286-20C635.16
stomach, neonate N03.CNhs11193.1340-24B825.49
stomach, neonate N07.CNhs11210.718-18A924.22
stomach, neonate N25.CNhs11104.1355-25E439.26
stomach, neonate N30.CNhs11134.1386-42I113.61
submandibular gland, adult.CNhs10469.59-29C118.64
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I420.27
thymus, embryo E15.CNhs11005.430-45I220.95
thymus, embryo E16.CNhs11002.456-26C511.69
thymus, embryo E17.CNhs10581.478-18C17.52
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F84.09
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C42.63
thymus, neonate N07.CNhs11211.713-19D32.29
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A22.14
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B465.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.97
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F518.96
uterus, adult.CNhs10509.92-27E515.75
vagina, adult.CNhs10502.89-27D5315.34
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.72e-0725
endodermal cell6.66e-0720

Uber anatomy
Ontology termp-valuen
endoderm-derived structure4.26e-23118
endoderm4.26e-23118
presumptive endoderm4.26e-23118
digestive system1.01e-21116
digestive tract1.01e-21116
primitive gut1.01e-21116
subdivision of digestive tract2.55e-20114
gastrointestinal system5.88e-1847
intestine1.66e-1731
mucosa6.37e-1115
intestinal mucosa1.82e-0913
wall of intestine1.82e-0913
gastrointestinal system mucosa1.82e-0913
gut epithelium9.36e-0955
organ component layer1.94e-0724







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:20217999..20218020,-&oldid=2949727"