FFCP PHASE1:Hg19::chr5:180235715..180235753,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4245|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7044|TSSclassifier=S|UniProt=D6RBS3|association_with_transcript=4bp_to_ENST00000502678_5end|coexpression_cluster_id=C5|description=CAGE_peak_14_at_MGAT1_5end|id=chr5:180235715..180235753,-|ontology_enrichment_celltype=CL:0000181!1.30e-08!12;CL:0000417!1.30e-08!12;CL:0000668!1.30e-08!12;CL:0000414!1.30e-08!12;CL:0000412!1.30e-08!12;CL:0000182!1.30e-08!12|ontology_enrichment_celltype_v019=CL:0000182;2.24e-20;12!CL:0000840;1.05e-10;5!CL:0002563;2.28e-07;4!CL:0000990;2.73e-07;8|ontology_enrichment_celltype_v019_2=CL:0000182,2.13e-20,12;CL:0000840,1.10e-10,5;CL:0001029,1.10e-10,5;CL:0000223,5.21e-10,58;CL:0002563,2.00e-07,4;CL:0000990,2.82e-07,8|ontology_enrichment_development_v019=UBERON:0004161;1.46e-15;11!UBERON:0009497;3.88e-13;13!UBERON:0003104;1.85e-07;31!CL:0000223;6.96e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3493;2.36e-14;2|ontology_enrichment_disease_v019_2=DOID:3493,1.80e-14,2|ontology_enrichment_uberon=UBERON:0005057!5.12e-11!26;UBERON:0003929!3.95e-10!54;UBERON:0009497!1.59e-08!25;UBERON:0000015!1.59e-08!25;UBERON:0002423!1.59e-08!25;UBERON:0006235!1.59e-08!25;UBERON:0004161!1.59e-08!25;UBERON:0008835!2.58e-08!22;UBERON:0003894!2.58e-08!22;UBERON:0002107!2.80e-08!19;UBERON:0006925!2.80e-08!19;UBERON:0008836!2.80e-08!19;UBERON:0009854!7.53e-08!23;UBERON:0007499!4.93e-07!25|ontology_enrichment_uberon_v019=UBERON:0002107;2.42e-22;19!UBERON:0006925;2.42e-22;19!UBERON:0002423;1.05e-16;25!UBERON:0005409;2.23e-13;22!UBERON:0002365;8.87e-13;31!UBERON:0002330;8.87e-13;31!UBERON:0000160;9.26e-13;17!UBERON:0002108;9.39e-13;4!UBERON:0002368;2.78e-11;33!UBERON:0001007;9.39e-09;81!UBERON:0000949;2.63e-08;43!UBERON:0004921;4.21e-08;33!UBERON:0001242;2.28e-07;4!UBERON:0001262;2.28e-07;4!UBERON:0004786;2.28e-07;4!UBERON:0004808;2.28e-07;4!UBERON:0001277;2.28e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-22,19;UBERON:0006925,2.32e-22,19;UBERON:0008836,2.32e-22,19;UBERON:0008835,3.73e-19,22;UBERON:0003894,3.73e-19,22;UBERON:0009854,2.85e-18,23;UBERON:0007499,1.02e-16,25;UBERON:0009497,1.02e-16,25;UBERON:0000015,1.02e-16,25;UBERON:0002423,1.02e-16,25;UBERON:0006235,1.02e-16,25;UBERON:0004161,1.02e-16,25;UBERON:0009856,4.97e-16,26;UBERON:0003929,2.59e-13,54;UBERON:0002365,2.96e-13,31;UBERON:0002330,2.96e-13,31;UBERON:0000160,8.51e-13,17;UBERON:0002108,9.39e-13,4;UBERON:0005409,9.14e-12,25;UBERON:0002368,1.32e-11,35;UBERON:0004921,2.02e-11,118;UBERON:0000949,9.15e-09,45;UBERON:0001007,1.00e-08,145;UBERON:0001555,1.00e-08,145;UBERON:0007026,1.00e-08,145;UBERON:0005911,4.30e-08,82;UBERON:0002530,4.69e-08,59;UBERON:0004119,1.27e-07,160;UBERON:0000925,1.27e-07,160;UBERON:0006595,1.27e-07,160;UBERON:0001242,2.00e-07,4;UBERON:0001262,2.00e-07,4;UBERON:0004786,2.00e-07,4;UBERON:0004808,2.00e-07,4;UBERON:0001277,2.00e-07,4;UBERON:0005172,4.14e-07,54;UBERON:0005173,4.14e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0.328402357799783,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,1.56740831967947,0.32389366601898,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,5.51730569212962,5.39802185627728,5.05240249971688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.7589600983309,26.5363348502959,24.2223861739376,0,1.72183813960359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,1.81289174387433,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.24328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,9.69681148000825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0.179021174675609,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.269272933229316,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,1.69623685720729,0,0,2.29989667708682,0,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349453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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4245 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7044 | |||
|TSSclassifier=S | |||
|UniProt=D6RBS3 | |||
|association_with_transcript=4bp_to_ENST00000502678_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_14_at_MGAT1_5end | |||
|id=chr5:180235715..180235753,- | |||
|ontology_enrichment_celltype=CL:0000181!1.30e-08!12;CL:0000417!1.30e-08!12;CL:0000668!1.30e-08!12;CL:0000414!1.30e-08!12;CL:0000412!1.30e-08!12;CL:0000182!1.30e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.24e-20;12!CL:0000840;1.05e-10;5!CL:0002563;2.28e-07;4!CL:0000990;2.73e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.13e-20,12;CL:0000840,1.10e-10,5;CL:0001029,1.10e-10,5;CL:0000223,5.21e-10,58;CL:0002563,2.00e-07,4;CL:0000990,2.82e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.46e-15;11!UBERON:0009497;3.88e-13;13!UBERON:0003104;1.85e-07;31!CL:0000223;6.96e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;2.36e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.80e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0005057!5.12e-11!26;UBERON:0003929!3.95e-10!54;UBERON:0009497!1.59e-08!25;UBERON:0000015!1.59e-08!25;UBERON:0002423!1.59e-08!25;UBERON:0006235!1.59e-08!25;UBERON:0004161!1.59e-08!25;UBERON:0008835!2.58e-08!22;UBERON:0003894!2.58e-08!22;UBERON:0002107!2.80e-08!19;UBERON:0006925!2.80e-08!19;UBERON:0008836!2.80e-08!19;UBERON:0009854!7.53e-08!23;UBERON:0007499!4.93e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.42e-22;19!UBERON:0006925;2.42e-22;19!UBERON:0002423;1.05e-16;25!UBERON:0005409;2.23e-13;22!UBERON:0002365;8.87e-13;31!UBERON:0002330;8.87e-13;31!UBERON:0000160;9.26e-13;17!UBERON:0002108;9.39e-13;4!UBERON:0002368;2.78e-11;33!UBERON:0001007;9.39e-09;81!UBERON:0000949;2.63e-08;43!UBERON:0004921;4.21e-08;33!UBERON:0001242;2.28e-07;4!UBERON:0001262;2.28e-07;4!UBERON:0004786;2.28e-07;4!UBERON:0004808;2.28e-07;4!UBERON:0001277;2.28e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-22,19;UBERON:0006925,2.32e-22,19;UBERON:0008836,2.32e-22,19;UBERON:0008835,3.73e-19,22;UBERON:0003894,3.73e-19,22;UBERON:0009854,2.85e-18,23;UBERON:0007499,1.02e-16,25;UBERON:0009497,1.02e-16,25;UBERON:0000015,1.02e-16,25;UBERON:0002423,1.02e-16,25;UBERON:0006235,1.02e-16,25;UBERON:0004161,1.02e-16,25;UBERON:0009856,4.97e-16,26;UBERON:0003929,2.59e-13,54;UBERON:0002365,2.96e-13,31;UBERON:0002330,2.96e-13,31;UBERON:0000160,8.51e-13,17;UBERON:0002108,9.39e-13,4;UBERON:0005409,9.14e-12,25;UBERON:0002368,1.32e-11,35;UBERON:0004921,2.02e-11,118;UBERON:0000949,9.15e-09,45;UBERON:0001007,1.00e-08,145;UBERON:0001555,1.00e-08,145;UBERON:0007026,1.00e-08,145;UBERON:0005911,4.30e-08,82;UBERON:0002530,4.69e-08,59;UBERON:0004119,1.27e-07,160;UBERON:0000925,1.27e-07,160;UBERON:0006595,1.27e-07,160;UBERON:0001242,2.00e-07,4;UBERON:0001262,2.00e-07,4;UBERON:0004786,2.00e-07,4;UBERON:0004808,2.00e-07,4;UBERON:0001277,2.00e-07,4;UBERON:0005172,4.14e-07,54;UBERON:0005173,4.14e-07,54 | |||
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|short_description=p14@MGAT1 | |||
}} |
Revision as of 15:15, 13 September 2013
Short description: | p14@MGAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_MGAT1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 4bp_to_ENST00000502678_5end |
EntrezGene: | MGAT1 |
HGNC: | 7044 |
UniProt: | D6RBS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.13e-20 | 12 |
immature conventional dendritic cell | 1.10e-10 | 5 |
common dendritic progenitor | 1.10e-10 | 5 |
endodermal cell | 5.21e-10 | 58 |
intestinal epithelial cell | 2.00e-07 | 4 |
conventional dendritic cell | 2.82e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.80e-14 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.