FFCP PHASE1:Mm9::chr17:36327066..36327103,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100505334,100505361,15043,633417|HGNC=|MCL_coexpression_id=12|UniProt=G3UZL7,Q05A75,G3UZR8,Q8HWB4,Q4KN85|association_with_transcript=0bp_to_ENSMUST00000095300,ENSMUST00000097329,ENSMUST00000172663,ENSMUST00000173133,ENSMUST00000173435,ENSMUST00000173629,ENSMUST00000174101,NM_008208,uc008ckm.1,uc012asp.1,uc012asr.1,uc012ass.1,uc012ast.1_5end|description=CAGE_peak_1_at_H2-T3_5end,CAGE_peak_1_at_LOC100505334_5end,CAGE_peak_1_at_LOC100505361_5end,CAGE_peak_1_at_LOC633417_5end|id=chr17:36327066..36327103,-|ontology_enrichment_celltype=CL:0002563!1.69e-11!9;CL:0002251!1.69e-11!9;CL:0000239!1.60e-08!6;CL:0000677!1.60e-08!6;CL:0000212!1.60e-08!6;CL:0000584!1.60e-08!6;CL:0000075!4.05e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,1.07e-12,9;CL:0002251,1.07e-12,9;CL:0000239,2.32e-09,6;CL:0000677,2.32e-09,6;CL:0000584,2.32e-09,6;CL:0000075,7.40e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.21e-24!43;UBERON:0005409!8.62e-22!59;UBERON:0000344!1.07e-18!15;UBERON:0001242!1.56e-16!13;UBERON:0000060!1.56e-16!13;UBERON:0001262!1.56e-16!13;UBERON:0004786!1.56e-16!13;UBERON:0003350!1.69e-11!9;UBERON:0004808!1.69e-11!9;UBERON:0001277!1.69e-11!9;UBERON:0004923!7.72e-10!24;UBERON:0000485!5.93e-09!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.73e-37,31;UBERON:0005409,2.98e-26,47;UBERON:0000344,9.14e-21,15;UBERON:0001242,2.45e-18,13;UBERON:0001262,2.45e-18,13;UBERON:0004786,2.45e-18,13;UBERON:0003350,1.07e-12,9;UBERON:0004808,1.07e-12,9;UBERON:0001277,1.07e-12,9;UBERON:0004923,3.11e-11,24;UBERON:0000485,5.77e-10,11;UBERON:0002108,5.25e-07,4|phase1_expression=0,127.027048380727,104.649825059593,239.249191143703,248.945177783335,18.6345991822198,19.6234618100242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.3978026100879,49.7818139915759,93.5998101507483,72.7987773508836,53.6523369387864,204.275175915602,210.697188479302,33.2595765982957,0,0,0,25.1300909183609,33.9118676531324,20.8252743387616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,7.72444310724635,0,0,0,0,0,0,0,0,0,0,25.4630051773504,0,0,0,0,0,0,0,0.502666365318702,0,0,0,0,0,0,20.5030937339934,0,0,126.451242328253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,293.742298072596,81.7152250990352,0,0,7.21657783403723,25.0087570532945,39.1385357166972,49.8391140414905,100.600161047436,112.324687121775,74.3952218048798,87.1429347540241,74.0863531052657,105.161870812544,127.52144942607,128.645262522321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604647113929502,0,0,0,20.4158351602895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,106.099024533266,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32021363287205,0.627264888043406,6.76923947613151,0.134864346384821,0.330613822901344,0,65.1963315657718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,1.77797382241292,2.67845574410562,2.24643446714271,2.02157769411038,1.2673964994512,1.88626341386076,2.24739617927718,2.43295579138503,2.64203157195821,1.90517476513229,1.50649623728312,1.92909220463705,2.06042950401653,3.09117732282234,2.40008476669791,2.30718548007139,0.953744759789284,3.48831399917588,2.91739079287525,2.11536519729191,3.10977553883713,2.89376682581627,3.12349461845482,1.68342681497322,2.01679530811096,1.97008964751127,3.27384834535751,2.32405261778949,1.92906610981141,0,3.74290573512653,4.51229213501426,0,0,0|short_description=p1@H2-T3,p1@LOC100505334,p1@LOC100505361,p1@LOC633417}} | ||
|EntrezGene=100505334,100505361,15043,633417 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=G3UZL7,Q05A75,G3UZR8,Q8HWB4,Q4KN85 | |||
|association_with_transcript=0bp_to_ENSMUST00000095300,ENSMUST00000097329,ENSMUST00000172663,ENSMUST00000173133,ENSMUST00000173435,ENSMUST00000173629,ENSMUST00000174101,NM_008208,uc008ckm.1,uc012asp.1,uc012asr.1,uc012ass.1,uc012ast.1_5end | |||
|description=CAGE_peak_1_at_H2-T3_5end,CAGE_peak_1_at_LOC100505334_5end,CAGE_peak_1_at_LOC100505361_5end,CAGE_peak_1_at_LOC633417_5end | |||
|id=chr17:36327066..36327103,- | |||
|ontology_enrichment_celltype=CL:0002563!1.69e-11!9;CL:0002251!1.69e-11!9;CL:0000239!1.60e-08!6;CL:0000677!1.60e-08!6;CL:0000212!1.60e-08!6;CL:0000584!1.60e-08!6;CL:0000075!4.05e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.07e-12,9;CL:0002251,1.07e-12,9;CL:0000239,2.32e-09,6;CL:0000677,2.32e-09,6;CL:0000584,2.32e-09,6;CL:0000075,7.40e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.21e-24!43;UBERON:0005409!8.62e-22!59;UBERON:0000344!1.07e-18!15;UBERON:0001242!1.56e-16!13;UBERON:0000060!1.56e-16!13;UBERON:0001262!1.56e-16!13;UBERON:0004786!1.56e-16!13;UBERON:0003350!1.69e-11!9;UBERON:0004808!1.69e-11!9;UBERON:0001277!1.69e-11!9;UBERON:0004923!7.72e-10!24;UBERON:0000485!5.93e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.73e-37,31;UBERON:0005409,2.98e-26,47;UBERON:0000344,9.14e-21,15;UBERON:0001242,2.45e-18,13;UBERON:0001262,2.45e-18,13;UBERON:0004786,2.45e-18,13;UBERON:0003350,1.07e-12,9;UBERON:0004808,1.07e-12,9;UBERON:0001277,1.07e-12,9;UBERON:0004923,3.11e-11,24;UBERON:0000485,5.77e-10,11;UBERON:0002108,5.25e-07,4 | |||
|phase1_expression=0,127.027048380727,104.649825059593,239.249191143703,248.945177783335,18.6345991822198,19.6234618100242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.3978026100879,49.7818139915759,93.5998101507483,72.7987773508836,53.6523369387864,204.275175915602,210.697188479302,33.2595765982957,0,0,0,25.1300909183609,33.9118676531324,20.8252743387616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,7.72444310724635,0,0,0,0,0,0,0,0,0,0,25.4630051773504,0,0,0,0,0,0,0,0.502666365318702,0,0,0,0,0,0,20.5030937339934,0,0,126.451242328253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,293.742298072596,81.7152250990352,0,0,7.21657783403723,25.0087570532945,39.1385357166972,49.8391140414905,100.600161047436,112.324687121775,74.3952218048798,87.1429347540241,74.0863531052657,105.161870812544,127.52144942607,128.645262522321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604647113929502,0,0,0,20.4158351602895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,106.099024533266,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32021363287205,0.627264888043406,6.76923947613151,0.134864346384821,0.330613822901344,0,65.1963315657718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,1.77797382241292,2.67845574410562,2.24643446714271,2.02157769411038,1.2673964994512,1.88626341386076,2.24739617927718,2.43295579138503,2.64203157195821,1.90517476513229,1.50649623728312,1.92909220463705,2.06042950401653,3.09117732282234,2.40008476669791,2.30718548007139,0.953744759789284,3.48831399917588,2.91739079287525,2.11536519729191,3.10977553883713,2.89376682581627,3.12349461845482,1.68342681497322,2.01679530811096,1.97008964751127,3.27384834535751,2.32405261778949,1.92906610981141,0,3.74290573512653,4.51229213501426,0,0,0 | |||
|short_description=p1@H2-T3,p1@LOC100505334,p1@LOC100505361,p1@LOC633417 | |||
}} |
Revision as of 14:28, 13 September 2013
Short description: | p1@H2-T3, p1@LOC100505334, p1@LOC100505361, p1@LOC633417 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_H2-T3_5end, CAGE_peak_1_at_LOC100505334_5end, CAGE_peak_1_at_LOC100505361_5end, CAGE_peak_1_at_LOC633417_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000095300, ENSMUST00000097329, ENSMUST00000172663, ENSMUST00000173133, ENSMUST00000173435, ENSMUST00000173629, ENSMUST00000174101, NM_008208, uc008ckm.1, uc012asp.1, uc012asr.1, uc012ass.1, uc012ast.1_5end |
EntrezGene: | 100505334,100505361,15043,633417 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.07e-12 | 9 |
epithelial cell of alimentary canal | 1.07e-12 | 9 |
brush border epithelial cell | 2.32e-09 | 6 |
gut absorptive cell | 2.32e-09 | 6 |
enterocyte | 2.32e-09 | 6 |
columnar/cuboidal epithelial cell | 7.40e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.73e-37 | 31 |
gastrointestinal system | 2.98e-26 | 47 |
mucosa | 9.14e-21 | 15 |
intestinal mucosa | 2.45e-18 | 13 |
wall of intestine | 2.45e-18 | 13 |
gastrointestinal system mucosa | 2.45e-18 | 13 |
epithelium of mucosa | 1.07e-12 | 9 |
gastrointestinal system epithelium | 1.07e-12 | 9 |
intestinal epithelium | 1.07e-12 | 9 |
organ component layer | 3.11e-11 | 24 |
simple columnar epithelium | 5.77e-10 | 11 |
small intestine | 5.25e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.