FFCP PHASE1:Mm9::chr17:36305477..36305491,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=667977|HGNC=|MCL_coexpression_id=24|UniProt=A7VMS6|association_with_transcript=0bp_to_ENSMUST00000040467,ENSMUST00000174771,NM_001081032_5end|description=CAGE_peak_1_at_Gm8909_5end|id=chr17:36305477..36305491,-|ontology_enrichment_celltype=CL:0002563!5.25e-11!9;CL:0002251!5.25e-11!9;CL:0000239!2.15e-08!6;CL:0000677!2.15e-08!6;CL:0000212!2.15e-08!6;CL:0000584!2.15e-08!6;CL:0000075!5.49e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,4.93e-21,9;CL:0002251,4.93e-21,9;CL:0000239,1.20e-15,6;CL:0000677,1.20e-15,6;CL:0000584,1.20e-15,6;CL:0000075,2.64e-13,7;CL:0000066,3.89e-12,25;CL:0002076,6.01e-12,15;CL:0000682,1.31e-08,3;CL:0000223,1.51e-08,20;CL:0002250,5.13e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.44e-21!43;UBERON:0000344!6.98e-18!15;UBERON:0005409!3.77e-16!59;UBERON:0001242!1.01e-15!13;UBERON:0000060!1.01e-15!13;UBERON:0001262!1.01e-15!13;UBERON:0004786!1.01e-15!13;UBERON:0003350!5.25e-11!9;UBERON:0004808!5.25e-11!9;UBERON:0001277!5.25e-11!9;UBERON:0004923!1.53e-10!24;UBERON:0001007!1.54e-10!128;UBERON:0001555!1.54e-10!128;UBERON:0007026!1.54e-10!128;UBERON:0004119!3.77e-10!130;UBERON:0000925!3.77e-10!130;UBERON:0006595!3.77e-10!130;UBERON:0004921!2.35e-09!126;UBERON:0004185!2.35e-09!126;UBERON:0000485!1.61e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.36e-58,31;UBERON:0005409,6.80e-39,47;UBERON:0000344,2.82e-35,15;UBERON:0001242,8.52e-31,13;UBERON:0001262,8.52e-31,13;UBERON:0004786,8.52e-31,13;UBERON:0003350,4.93e-21,9;UBERON:0004808,4.93e-21,9;UBERON:0001277,4.93e-21,9;UBERON:0004923,1.02e-20,24;UBERON:0000485,6.66e-17,11;UBERON:0001007,2.36e-14,116;UBERON:0001555,2.36e-14,116;UBERON:0007026,2.36e-14,116;UBERON:0004119,5.38e-14,118;UBERON:0000925,5.38e-14,118;UBERON:0006595,5.38e-14,118;UBERON:0004921,2.78e-12,114;UBERON:0002108,7.89e-11,4;UBERON:0000331,1.24e-08,3;UBERON:0002116,1.24e-08,3;UBERON:0001204,1.24e-08,3;UBERON:0001168,1.24e-08,3|phase1_expression=0,355.25696497687,305.759488869768,442.202676930586,630.126828272505,15.1091344720701,13.0823078733494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.1979541542198,55.9758645803895,215.336986543133,110.275071016723,86.6194355397274,145.557939303582,219.01418276138,40.1332224286102,0,0,0,1.44425809875637,7.14808975041517,1.22501613757421,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03911006566533,0,0,0,0,0,0,0,0,0,0,19.7538111913974,0,0,0,0,0,0,0,0.879666139307728,0.494389935468748,0,0,0,0,0,16.775258509631,0,0,114.700217788658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,450.360801206917,79.0707194323997,0.426576501070468,0,0.257734922644187,1.4117846723634,2.2237804384487,5.70676878337677,124.801143186207,22.0696599330175,21.6148279568232,17.7071260116624,25.1503672383665,119.542981351011,100.071917091983,120.281329045638,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.651859905768103,0.339490171550376,0,0.335012514883631,0,0.195133647857799,0.472905432318573,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.6190941772418,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0.87345025498471,0,0,0,12.0541925161367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0.600977247599844,0.295379054349154,0.302899349844443,0.304827226619999,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0.44449345560323,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.256100609619477,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0.685738504770831,0.70990322463735,0,0.145346416632329,0.376437521661322,0.423073039458382,0.365855945745545,0.789209134313529,0.135804113845862,0.561142271657738,0,0.197008964751127,0.409231043169689,0.619747364743864,0.385813221962283,0,0.233931608445408,0.644613162144895,0,0,0|short_description=p1@Gm8909}} | ||
|EntrezGene=667977 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=A7VMS6 | |||
|association_with_transcript=0bp_to_ENSMUST00000040467,ENSMUST00000174771,NM_001081032_5end | |||
|description=CAGE_peak_1_at_Gm8909_5end | |||
|id=chr17:36305477..36305491,- | |||
|ontology_enrichment_celltype=CL:0002563!5.25e-11!9;CL:0002251!5.25e-11!9;CL:0000239!2.15e-08!6;CL:0000677!2.15e-08!6;CL:0000212!2.15e-08!6;CL:0000584!2.15e-08!6;CL:0000075!5.49e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.93e-21,9;CL:0002251,4.93e-21,9;CL:0000239,1.20e-15,6;CL:0000677,1.20e-15,6;CL:0000584,1.20e-15,6;CL:0000075,2.64e-13,7;CL:0000066,3.89e-12,25;CL:0002076,6.01e-12,15;CL:0000682,1.31e-08,3;CL:0000223,1.51e-08,20;CL:0002250,5.13e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.44e-21!43;UBERON:0000344!6.98e-18!15;UBERON:0005409!3.77e-16!59;UBERON:0001242!1.01e-15!13;UBERON:0000060!1.01e-15!13;UBERON:0001262!1.01e-15!13;UBERON:0004786!1.01e-15!13;UBERON:0003350!5.25e-11!9;UBERON:0004808!5.25e-11!9;UBERON:0001277!5.25e-11!9;UBERON:0004923!1.53e-10!24;UBERON:0001007!1.54e-10!128;UBERON:0001555!1.54e-10!128;UBERON:0007026!1.54e-10!128;UBERON:0004119!3.77e-10!130;UBERON:0000925!3.77e-10!130;UBERON:0006595!3.77e-10!130;UBERON:0004921!2.35e-09!126;UBERON:0004185!2.35e-09!126;UBERON:0000485!1.61e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.36e-58,31;UBERON:0005409,6.80e-39,47;UBERON:0000344,2.82e-35,15;UBERON:0001242,8.52e-31,13;UBERON:0001262,8.52e-31,13;UBERON:0004786,8.52e-31,13;UBERON:0003350,4.93e-21,9;UBERON:0004808,4.93e-21,9;UBERON:0001277,4.93e-21,9;UBERON:0004923,1.02e-20,24;UBERON:0000485,6.66e-17,11;UBERON:0001007,2.36e-14,116;UBERON:0001555,2.36e-14,116;UBERON:0007026,2.36e-14,116;UBERON:0004119,5.38e-14,118;UBERON:0000925,5.38e-14,118;UBERON:0006595,5.38e-14,118;UBERON:0004921,2.78e-12,114;UBERON:0002108,7.89e-11,4;UBERON:0000331,1.24e-08,3;UBERON:0002116,1.24e-08,3;UBERON:0001204,1.24e-08,3;UBERON:0001168,1.24e-08,3 | |||
|phase1_expression=0,355.25696497687,305.759488869768,442.202676930586,630.126828272505,15.1091344720701,13.0823078733494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.1979541542198,55.9758645803895,215.336986543133,110.275071016723,86.6194355397274,145.557939303582,219.01418276138,40.1332224286102,0,0,0,1.44425809875637,7.14808975041517,1.22501613757421,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03911006566533,0,0,0,0,0,0,0,0,0,0,19.7538111913974,0,0,0,0,0,0,0,0.879666139307728,0.494389935468748,0,0,0,0,0,16.775258509631,0,0,114.700217788658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,450.360801206917,79.0707194323997,0.426576501070468,0,0.257734922644187,1.4117846723634,2.2237804384487,5.70676878337677,124.801143186207,22.0696599330175,21.6148279568232,17.7071260116624,25.1503672383665,119.542981351011,100.071917091983,120.281329045638,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.651859905768103,0.339490171550376,0,0.335012514883631,0,0.195133647857799,0.472905432318573,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.6190941772418,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0.87345025498471,0,0,0,12.0541925161367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0.600977247599844,0.295379054349154,0.302899349844443,0.304827226619999,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0.44449345560323,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.256100609619477,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0.685738504770831,0.70990322463735,0,0.145346416632329,0.376437521661322,0.423073039458382,0.365855945745545,0.789209134313529,0.135804113845862,0.561142271657738,0,0.197008964751127,0.409231043169689,0.619747364743864,0.385813221962283,0,0.233931608445408,0.644613162144895,0,0,0 | |||
|short_description=p1@Gm8909 | |||
}} |
Revision as of 14:28, 13 September 2013
Short description: | p1@Gm8909 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm8909_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000040467, ENSMUST00000174771, NM_001081032_5end |
EntrezGene: | Gm8909 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.93e-21 | 9 |
epithelial cell of alimentary canal | 4.93e-21 | 9 |
brush border epithelial cell | 1.20e-15 | 6 |
gut absorptive cell | 1.20e-15 | 6 |
enterocyte | 1.20e-15 | 6 |
columnar/cuboidal epithelial cell | 2.64e-13 | 7 |
epithelial cell | 3.89e-12 | 25 |
endo-epithelial cell | 6.01e-12 | 15 |
M cell of gut | 1.31e-08 | 3 |
endodermal cell | 1.51e-08 | 20 |
intestinal crypt stem cell | 5.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.36e-58 | 31 |
gastrointestinal system | 6.80e-39 | 47 |
mucosa | 2.82e-35 | 15 |
intestinal mucosa | 8.52e-31 | 13 |
wall of intestine | 8.52e-31 | 13 |
gastrointestinal system mucosa | 8.52e-31 | 13 |
epithelium of mucosa | 4.93e-21 | 9 |
gastrointestinal system epithelium | 4.93e-21 | 9 |
intestinal epithelium | 4.93e-21 | 9 |
organ component layer | 1.02e-20 | 24 |
simple columnar epithelium | 6.66e-17 | 11 |
digestive system | 2.36e-14 | 116 |
digestive tract | 2.36e-14 | 116 |
primitive gut | 2.36e-14 | 116 |
endoderm-derived structure | 5.38e-14 | 118 |
endoderm | 5.38e-14 | 118 |
presumptive endoderm | 5.38e-14 | 118 |
subdivision of digestive tract | 2.78e-12 | 114 |
small intestine | 7.89e-11 | 4 |
ileal mucosa | 1.24e-08 | 3 |
ileum | 1.24e-08 | 3 |
mucosa of small intestine | 1.24e-08 | 3 |
wall of small intestine | 1.24e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.