FFCP PHASE1:Hg19::chr5:150970911..150970920,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2196|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=3596|TSSclassifier=S|UniProt=|association_with_transcript=-33bp_to_AK308619_5end|coexpression_cluster_id=C11|description=CAGE_peak_3_at_FAT2_5end|id=chr5:150970911..150970920,-|ontology_enrichment_celltype=CL:0002076!4.53e-20!43;CL:0000223!5.50e-15!59;CL:0002368!1.41e-13!13;CL:0002328!4.09e-10!3;CL:0000622!9.18e-10!5;CL:0002251!1.09e-09!21;CL:0000154!3.90e-08!6;CL:0000066!6.16e-08!254;CL:0000244!1.09e-07!4;CL:0000731!1.09e-07!4;CL:0000317!2.42e-07!2;CL:1000448!2.42e-07!2;CL:0002308!2.42e-07!2;CL:0002140!2.42e-07!2|ontology_enrichment_celltype_v019=CL:0002252;2.93e-23;1!CL:0000575;3.24e-12;2!CL:0000244;7.70e-07;4!CL:0000731;7.70e-07;4!CL:0002327;9.63e-07;4|ontology_enrichment_celltype_v019_2=CL:0002252,3.28e-23,1;CL:0000575,3.62e-12,2;CL:0000244,7.70e-07,4;CL:0000731,7.70e-07,4;CL:0002327,9.63e-07,4|ontology_enrichment_development_v019=UBERON:0006215;5.01e-67;3|ontology_enrichment_disease=DOID:1749!5.88e-12!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004733!2.13e-19!12;UBERON:0002028!2.13e-19!12;UBERON:0007277!2.13e-19!12;UBERON:0004732!9.24e-18!13;UBERON:0003076!3.84e-15!15;UBERON:0003057!3.84e-15!15;UBERON:0002680!5.49e-12!9;UBERON:0001895!5.49e-12!9;UBERON:0010092!5.49e-12!9;UBERON:0000161!5.36e-11!35;UBERON:0000365!3.28e-10!5;UBERON:0004815!4.09e-10!3;UBERON:0002031!4.09e-10!3;UBERON:0001896!7.69e-10!3;UBERON:0005290!7.69e-10!3;UBERON:0010096!7.69e-10!3;UBERON:0001004!8.77e-10!72;UBERON:0003729!1.27e-09!5;UBERON:0000166!1.41e-09!21;UBERON:0001723!1.57e-09!3;UBERON:0001033!1.57e-09!3;UBERON:0010056!1.57e-09!3;UBERON:0002298!2.63e-09!8;UBERON:0006562!5.95e-09!11;UBERON:0002037!1.01e-08!6;UBERON:0006215!1.01e-08!6;UBERON:0004119!1.28e-08!169;UBERON:0000925!1.28e-08!169;UBERON:0006595!1.28e-08!169;UBERON:0004121!1.34e-08!169;UBERON:0005910!1.68e-08!6;UBERON:0003102!2.17e-08!95;UBERON:0000165!2.36e-08!28;UBERON:0000930!2.36e-08!28;UBERON:0000924!3.07e-08!173;UBERON:0006601!3.07e-08!173;UBERON:0000344!3.27e-08!12;UBERON:0000063!3.46e-08!97;UBERON:0002185!1.14e-07!4;UBERON:0000065!1.45e-07!53;UBERON:0002419!2.42e-07!2;UBERON:0007771!2.42e-07!2;UBERON:0003297!2.42e-07!2;UBERON:0001821!2.42e-07!2;UBERON:0003487!2.42e-07!2;UBERON:0001820!2.42e-07!2;UBERON:0005089!2.42e-07!2;UBERON:0005088!2.42e-07!2;UBERON:0003343!2.69e-07!4;UBERON:0004785!2.69e-07!4;UBERON:0001042!4.74e-07!10;UBERON:0009145!4.74e-07!10;UBERON:0000153!8.65e-07!129;UBERON:0007811!8.65e-07!129;UBERON:0001255!8.83e-07!2;UBERON:0001556!8.83e-07!2|ontology_enrichment_uberon_v019=UBERON:0002680;1.33e-39;9!UBERON:0001895;1.33e-39;9!UBERON:0002037;5.37e-34;6!UBERON:0004733;7.35e-30;12!UBERON:0002028;7.35e-30;12!UBERON:0004732;1.31e-27;13!UBERON:0001043;1.17e-08;3!UBERON:0000988;1.40e-08;3!UBERON:0003343;8.37e-07;4!UBERON:0004785;8.37e-07;4!UBERON:0001911;9.63e-07;4!UBERON:0000964;9.63e-07;4!UBERON:0010409;9.63e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002680,1.21e-39,9;UBERON:0001895,1.21e-39,9;UBERON:0010092,1.21e-39,9;UBERON:0002037,5.37e-34,6;UBERON:0006215,5.37e-34,6;UBERON:0004733,6.82e-30,12;UBERON:0002028,6.82e-30,12;UBERON:0007277,6.82e-30,12;UBERON:0004732,1.22e-27,13;UBERON:0003076,4.96e-24,15;UBERON:0003057,4.96e-24,15;UBERON:0001043,1.21e-08,3;UBERON:0009143,1.21e-08,3;UBERON:0000988,1.30e-08,3;UBERON:0010371,1.52e-07,104;UBERON:0000073,5.83e-07,53;UBERON:0002616,5.83e-07,53;UBERON:0003343,8.14e-07,4;UBERON:0004785,8.14e-07,4;UBERON:0003075,8.18e-07,82;UBERON:0007284,8.18e-07,82;UBERON:0001911,9.63e-07,4;UBERON:0005333,9.63e-07,4;UBERON:0008425,9.63e-07,4;UBERON:0005311,9.63e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0.301586917234893,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0.43050537267123,5.0541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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2196 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3596 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-33bp_to_AK308619_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_3_at_FAT2_5end | |||
|id=chr5:150970911..150970920,- | |||
|ontology_enrichment_celltype=CL:0002076!4.53e-20!43;CL:0000223!5.50e-15!59;CL:0002368!1.41e-13!13;CL:0002328!4.09e-10!3;CL:0000622!9.18e-10!5;CL:0002251!1.09e-09!21;CL:0000154!3.90e-08!6;CL:0000066!6.16e-08!254;CL:0000244!1.09e-07!4;CL:0000731!1.09e-07!4;CL:0000317!2.42e-07!2;CL:1000448!2.42e-07!2;CL:0002308!2.42e-07!2;CL:0002140!2.42e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002252;2.93e-23;1!CL:0000575;3.24e-12;2!CL:0000244;7.70e-07;4!CL:0000731;7.70e-07;4!CL:0002327;9.63e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002252,3.28e-23,1;CL:0000575,3.62e-12,2;CL:0000244,7.70e-07,4;CL:0000731,7.70e-07,4;CL:0002327,9.63e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.01e-67;3 | |||
|ontology_enrichment_disease=DOID:1749!5.88e-12!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!2.13e-19!12;UBERON:0002028!2.13e-19!12;UBERON:0007277!2.13e-19!12;UBERON:0004732!9.24e-18!13;UBERON:0003076!3.84e-15!15;UBERON:0003057!3.84e-15!15;UBERON:0002680!5.49e-12!9;UBERON:0001895!5.49e-12!9;UBERON:0010092!5.49e-12!9;UBERON:0000161!5.36e-11!35;UBERON:0000365!3.28e-10!5;UBERON:0004815!4.09e-10!3;UBERON:0002031!4.09e-10!3;UBERON:0001896!7.69e-10!3;UBERON:0005290!7.69e-10!3;UBERON:0010096!7.69e-10!3;UBERON:0001004!8.77e-10!72;UBERON:0003729!1.27e-09!5;UBERON:0000166!1.41e-09!21;UBERON:0001723!1.57e-09!3;UBERON:0001033!1.57e-09!3;UBERON:0010056!1.57e-09!3;UBERON:0002298!2.63e-09!8;UBERON:0006562!5.95e-09!11;UBERON:0002037!1.01e-08!6;UBERON:0006215!1.01e-08!6;UBERON:0004119!1.28e-08!169;UBERON:0000925!1.28e-08!169;UBERON:0006595!1.28e-08!169;UBERON:0004121!1.34e-08!169;UBERON:0005910!1.68e-08!6;UBERON:0003102!2.17e-08!95;UBERON:0000165!2.36e-08!28;UBERON:0000930!2.36e-08!28;UBERON:0000924!3.07e-08!173;UBERON:0006601!3.07e-08!173;UBERON:0000344!3.27e-08!12;UBERON:0000063!3.46e-08!97;UBERON:0002185!1.14e-07!4;UBERON:0000065!1.45e-07!53;UBERON:0002419!2.42e-07!2;UBERON:0007771!2.42e-07!2;UBERON:0003297!2.42e-07!2;UBERON:0001821!2.42e-07!2;UBERON:0003487!2.42e-07!2;UBERON:0001820!2.42e-07!2;UBERON:0005089!2.42e-07!2;UBERON:0005088!2.42e-07!2;UBERON:0003343!2.69e-07!4;UBERON:0004785!2.69e-07!4;UBERON:0001042!4.74e-07!10;UBERON:0009145!4.74e-07!10;UBERON:0000153!8.65e-07!129;UBERON:0007811!8.65e-07!129;UBERON:0001255!8.83e-07!2;UBERON:0001556!8.83e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;1.33e-39;9!UBERON:0001895;1.33e-39;9!UBERON:0002037;5.37e-34;6!UBERON:0004733;7.35e-30;12!UBERON:0002028;7.35e-30;12!UBERON:0004732;1.31e-27;13!UBERON:0001043;1.17e-08;3!UBERON:0000988;1.40e-08;3!UBERON:0003343;8.37e-07;4!UBERON:0004785;8.37e-07;4!UBERON:0001911;9.63e-07;4!UBERON:0000964;9.63e-07;4!UBERON:0010409;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,1.21e-39,9;UBERON:0001895,1.21e-39,9;UBERON:0010092,1.21e-39,9;UBERON:0002037,5.37e-34,6;UBERON:0006215,5.37e-34,6;UBERON:0004733,6.82e-30,12;UBERON:0002028,6.82e-30,12;UBERON:0007277,6.82e-30,12;UBERON:0004732,1.22e-27,13;UBERON:0003076,4.96e-24,15;UBERON:0003057,4.96e-24,15;UBERON:0001043,1.21e-08,3;UBERON:0009143,1.21e-08,3;UBERON:0000988,1.30e-08,3;UBERON:0010371,1.52e-07,104;UBERON:0000073,5.83e-07,53;UBERON:0002616,5.83e-07,53;UBERON:0003343,8.14e-07,4;UBERON:0004785,8.14e-07,4;UBERON:0003075,8.18e-07,82;UBERON:0007284,8.18e-07,82;UBERON:0001911,9.63e-07,4;UBERON:0005333,9.63e-07,4;UBERON:0008425,9.63e-07,4;UBERON:0005311,9.63e-07,4 | |||
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|short_description=p3@FAT2 | |||
}} |
Revision as of 14:16, 13 September 2013
Short description: | p3@FAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FAT2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -33bp_to_AK308619_5end |
EntrezGene: | FAT2 |
HGNC: | 3596 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 3.28e-23 | 1 |
corneal epithelial cell | 3.62e-12 | 2 |
transitional epithelial cell | 7.70e-07 | 4 |
urothelial cell | 7.70e-07 | 4 |
mammary gland epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 1.21e-39 | 9 |
metencephalon | 1.21e-39 | 9 |
future metencephalon | 1.21e-39 | 9 |
cerebellum | 5.37e-34 | 6 |
rhombic lip | 5.37e-34 | 6 |
segmental subdivision of hindbrain | 6.82e-30 | 12 |
hindbrain | 6.82e-30 | 12 |
presumptive hindbrain | 6.82e-30 | 12 |
segmental subdivision of nervous system | 1.22e-27 | 13 |
posterior neural tube | 4.96e-24 | 15 |
chordal neural plate | 4.96e-24 | 15 |
esophagus | 1.21e-08 | 3 |
esophageal region | 1.21e-08 | 3 |
pons | 1.30e-08 | 3 |
ecto-epithelium | 1.52e-07 | 104 |
regional part of nervous system | 5.83e-07 | 53 |
regional part of brain | 5.83e-07 | 53 |
mucosa of oral region | 8.14e-07 | 4 |
respiratory system mucosa | 8.14e-07 | 4 |
neural plate | 8.18e-07 | 82 |
presumptive neural plate | 8.18e-07 | 82 |
mammary gland | 9.63e-07 | 4 |
mammary bud | 9.63e-07 | 4 |
mammary ridge | 9.63e-07 | 4 |
mammary placode | 9.63e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.