FFCP PHASE1:Hg19::chr5:147470195..147470230,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11005|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15464|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000481286_5end|coexpression_cluster_id=C2810|description=CAGE_peak_5_at_SPINK5_5end|id=chr5:147470195..147470230,+|ontology_enrichment_celltype=CL:0002150!5.36e-16!3;CL:0000861!5.36e-16!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0000358;1.54e-29;1!UBERON:0008814;2.37e-15;2!UBERON:0010056;2.37e-15;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4362;4.79e-07;5|ontology_enrichment_disease_v019_2=DOID:4362,4.79e-07,5|ontology_enrichment_uberon=UBERON:0006562!2.46e-10!11;UBERON:0007023!3.55e-10!115;UBERON:0001042!1.48e-07!10;UBERON:0009145!1.48e-07!10;UBERON:0001723!1.74e-07!3;UBERON:0001033!1.74e-07!3;UBERON:0010056!1.74e-07!3;UBERON:0004921!1.90e-07!129;UBERON:0004185!1.90e-07!129|ontology_enrichment_uberon_v019=UBERON:0001389;3.16e-29;1!UBERON:0000026;3.16e-29;1!UBERON:0008784;3.16e-29;1!UBERON:0006058;3.16e-29;1!UBERON:0003663;3.16e-29;1!UBERON:0004256;3.16e-29;1!UBERON:0004708;3.16e-29;1!UBERON:0002101;3.16e-29;1!UBERON:0004709;3.16e-29;1!UBERON:0002529;3.16e-29;1!UBERON:0010538;3.16e-29;1!UBERON:0003661;3.16e-29;1!UBERON:0010890;3.16e-29;1!UBERON:0002471;3.16e-29;1!UBERON:0001383;3.16e-29;1!UBERON:0010758;3.16e-29;1!UBERON:0010707;3.16e-29;1!UBERON:0000978;3.16e-29;1!UBERON:0002103;3.16e-29;1!UBERON:0001665;3.16e-29;1!UBERON:0003823;3.16e-29;1!UBERON:0000154;3.16e-29;1!UBERON:0010709;3.16e-29;1!UBERON:0005090;2.37e-15;2!UBERON:0001630;2.37e-15;2!UBERON:0001723;1.09e-10;3!UBERON:0001033;1.09e-10;3|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.20e-29,1;UBERON:0001389,4.20e-29,1;UBERON:0000026,4.20e-29,1;UBERON:0008784,4.20e-29,1;UBERON:0006058,4.20e-29,1;UBERON:0003663,4.20e-29,1;UBERON:0004256,4.20e-29,1;UBERON:0004708,4.20e-29,1;UBERON:0002101,4.20e-29,1;UBERON:0004709,4.20e-29,1;UBERON:0002529,4.20e-29,1;UBERON:0010538,4.20e-29,1;UBERON:0003661,4.20e-29,1;UBERON:0010890,4.20e-29,1;UBERON:0002471,4.20e-29,1;UBERON:0001383,4.20e-29,1;UBERON:0004357,4.20e-29,1;UBERON:0004347,4.20e-29,1;UBERON:0005420,4.20e-29,1;UBERON:0005732,4.20e-29,1;UBERON:0010758,4.20e-29,1;UBERON:0010707,4.20e-29,1;UBERON:0000978,4.20e-29,1;UBERON:0002103,4.20e-29,1;UBERON:0001665,4.20e-29,1;UBERON:0003823,4.20e-29,1;UBERON:0000154,4.20e-29,1;UBERON:0010709,4.20e-29,1;UBERON:0005733,4.20e-29,1;UBERON:0005730,4.20e-29,1;UBERON:0005090,2.74e-15,2;UBERON:0001630,2.74e-15,2;UBERON:0001723,1.09e-10,3;UBERON:0001033,1.09e-10,3;UBERON:0010056,1.09e-10,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.535798369704479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.557216921387392,0,0,0,0,0,0,0,0,0.63337622438398,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.22904624891153,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,1.74161396320353,4.75080561060206,2.21711734043665,0.387956065953678,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.375935671919414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11005 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15464 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000481286_5end | |||
|coexpression_cluster_id=C2810 | |||
|description=CAGE_peak_5_at_SPINK5_5end | |||
|id=chr5:147470195..147470230,+ | |||
|ontology_enrichment_celltype=CL:0002150!5.36e-16!3;CL:0000861!5.36e-16!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.54e-29;1!UBERON:0008814;2.37e-15;2!UBERON:0010056;2.37e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;4.79e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,4.79e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0006562!2.46e-10!11;UBERON:0007023!3.55e-10!115;UBERON:0001042!1.48e-07!10;UBERON:0009145!1.48e-07!10;UBERON:0001723!1.74e-07!3;UBERON:0001033!1.74e-07!3;UBERON:0010056!1.74e-07!3;UBERON:0004921!1.90e-07!129;UBERON:0004185!1.90e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;3.16e-29;1!UBERON:0000026;3.16e-29;1!UBERON:0008784;3.16e-29;1!UBERON:0006058;3.16e-29;1!UBERON:0003663;3.16e-29;1!UBERON:0004256;3.16e-29;1!UBERON:0004708;3.16e-29;1!UBERON:0002101;3.16e-29;1!UBERON:0004709;3.16e-29;1!UBERON:0002529;3.16e-29;1!UBERON:0010538;3.16e-29;1!UBERON:0003661;3.16e-29;1!UBERON:0010890;3.16e-29;1!UBERON:0002471;3.16e-29;1!UBERON:0001383;3.16e-29;1!UBERON:0010758;3.16e-29;1!UBERON:0010707;3.16e-29;1!UBERON:0000978;3.16e-29;1!UBERON:0002103;3.16e-29;1!UBERON:0001665;3.16e-29;1!UBERON:0003823;3.16e-29;1!UBERON:0000154;3.16e-29;1!UBERON:0010709;3.16e-29;1!UBERON:0005090;2.37e-15;2!UBERON:0001630;2.37e-15;2!UBERON:0001723;1.09e-10;3!UBERON:0001033;1.09e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.20e-29,1;UBERON:0001389,4.20e-29,1;UBERON:0000026,4.20e-29,1;UBERON:0008784,4.20e-29,1;UBERON:0006058,4.20e-29,1;UBERON:0003663,4.20e-29,1;UBERON:0004256,4.20e-29,1;UBERON:0004708,4.20e-29,1;UBERON:0002101,4.20e-29,1;UBERON:0004709,4.20e-29,1;UBERON:0002529,4.20e-29,1;UBERON:0010538,4.20e-29,1;UBERON:0003661,4.20e-29,1;UBERON:0010890,4.20e-29,1;UBERON:0002471,4.20e-29,1;UBERON:0001383,4.20e-29,1;UBERON:0004357,4.20e-29,1;UBERON:0004347,4.20e-29,1;UBERON:0005420,4.20e-29,1;UBERON:0005732,4.20e-29,1;UBERON:0010758,4.20e-29,1;UBERON:0010707,4.20e-29,1;UBERON:0000978,4.20e-29,1;UBERON:0002103,4.20e-29,1;UBERON:0001665,4.20e-29,1;UBERON:0003823,4.20e-29,1;UBERON:0000154,4.20e-29,1;UBERON:0010709,4.20e-29,1;UBERON:0005733,4.20e-29,1;UBERON:0005730,4.20e-29,1;UBERON:0005090,2.74e-15,2;UBERON:0001630,2.74e-15,2;UBERON:0001723,1.09e-10,3;UBERON:0001033,1.09e-10,3;UBERON:0010056,1.09e-10,3 | |||
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|short_description=p5@SPINK5 | |||
}} |
Revision as of 13:54, 13 September 2013
Short description: | p5@SPINK5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SPINK5_5end |
Coexpression cluster: | C2810_cervical_epitheloid_anaplastic_ductal_Small_gall_esophagus |
Association with transcript: | 0bp_to_ENST00000481286_5end |
EntrezGene: | SPINK5 |
HGNC: | 15464 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 4.20e-29 | 1 |
soleus muscle | 4.20e-29 | 1 |
appendage | 4.20e-29 | 1 |
lower limb segment | 4.20e-29 | 1 |
multi-limb segment region | 4.20e-29 | 1 |
hindlimb muscle | 4.20e-29 | 1 |
hindlimb zeugopod muscle | 4.20e-29 | 1 |
paired limb/fin | 4.20e-29 | 1 |
limb | 4.20e-29 | 1 |
pelvic appendage | 4.20e-29 | 1 |
limb segment | 4.20e-29 | 1 |
paired limb/fin segment | 4.20e-29 | 1 |
limb muscle | 4.20e-29 | 1 |
pelvic complex muscle | 4.20e-29 | 1 |
zeugopod | 4.20e-29 | 1 |
muscle of leg | 4.20e-29 | 1 |
paired limb/fin bud | 4.20e-29 | 1 |
limb bud | 4.20e-29 | 1 |
pelvic appendage bud | 4.20e-29 | 1 |
limb/fin field | 4.20e-29 | 1 |
subdivision of organism along appendicular axis | 4.20e-29 | 1 |
appendage girdle complex | 4.20e-29 | 1 |
leg | 4.20e-29 | 1 |
hindlimb | 4.20e-29 | 1 |
triceps surae | 4.20e-29 | 1 |
hindlimb zeugopod | 4.20e-29 | 1 |
posterior region of body | 4.20e-29 | 1 |
pelvic complex | 4.20e-29 | 1 |
limb field | 4.20e-29 | 1 |
hindlimb/pelvic fin field | 4.20e-29 | 1 |
muscle structure | 2.74e-15 | 2 |
muscle organ | 2.74e-15 | 2 |
tongue | 1.09e-10 | 3 |
gustatory system | 1.09e-10 | 3 |
future tongue | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.79e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.