FFCP PHASE1:Mm9::chr16:97881133..97881147,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=410|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:97881133..97881147,-|id=chr16:97881133..97881147,-|ontology_enrichment_celltype=CL:0002563!2.17e-10!9;CL:0002251!2.17e-10!9;CL:0000239!1.60e-07!6;CL:0000677!1.60e-07!6;CL:0000212!1.60e-07!6;CL:0000584!1.60e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,1.61e-18,9;CL:0002251,1.61e-18,9;CL:0000239,5.14e-13,6;CL:0000677,5.14e-13,6;CL:0000584,5.14e-13,6;CL:0000075,5.04e-11,7;CL:0002076,2.62e-10,15;CL:0000066,3.04e-10,25;CL:0000682,1.18e-07,3;CL:0000223,2.98e-07,20;CL:0002250,4.49e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!5.63e-28!59;UBERON:0000160!6.02e-27!43;UBERON:0001007!1.58e-21!128;UBERON:0001555!1.58e-21!128;UBERON:0007026!1.58e-21!128;UBERON:0004119!7.75e-21!130;UBERON:0000925!7.75e-21!130;UBERON:0006595!7.75e-21!130;UBERON:0004921!7.64e-20!126;UBERON:0004185!7.64e-20!126;UBERON:0000344!6.83e-16!15;UBERON:0001242!7.98e-14!13;UBERON:0000060!7.98e-14!13;UBERON:0001262!7.98e-14!13;UBERON:0004786!7.98e-14!13;UBERON:0003350!2.17e-10!9;UBERON:0004808!2.17e-10!9;UBERON:0001277!2.17e-10!9;UBERON:0004923!5.44e-10!24;UBERON:0000485!6.17e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.01e-32,47;UBERON:0000160,9.20e-32,31;UBERON:0000344,4.03e-29,15;UBERON:0001242,3.93e-25,13;UBERON:0001262,3.93e-25,13;UBERON:0004786,3.93e-25,13;UBERON:0001007,9.10e-23,116;UBERON:0001555,9.10e-23,116;UBERON:0007026,9.10e-23,116;UBERON:0004119,3.21e-22,118;UBERON:0000925,3.21e-22,118;UBERON:0006595,3.21e-22,118;UBERON:0004921,2.81e-20,114;UBERON:0004923,6.93e-19,24;UBERON:0003350,1.61e-18,9;UBERON:0004808,1.61e-18,9;UBERON:0001277,1.61e-18,9;UBERON:0000485,8.79e-15,11;UBERON:0011216,4.76e-08,194;UBERON:0002108,5.24e-08,4;UBERON:0003929,2.00e-07,55|phase1_expression=0,4.88565570695105,6.82498859084304,3.93203474698879,4.00716583957078,11.7515490338323,10.2789561862031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.23970448894286,6.42345986988076,6.31655160526522,14.2151458732495,10.1271479362368,1.52018735565099,1.26015064879965,11.5299865540758,0,0,0,6.35473563452804,2.99222361645286,5.10423390655923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0.150722640552623,0.117588707135705,0,1.23597483867187,0,0,0,0,0,1.86391761218122,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,4.7601101999438,0.426576501070468,0.232236671860439,0.38660238396628,1.4117846723634,0.889512175379481,0.760902504450237,1.89811624617805,0.329397909448022,1.00534083520108,0.795825888164603,1.16978452271472,1.79763881730844,2.59365659849633,2.78797782556114,0,0.114248512609729,0,0,0,0.0701358198903186,0.316182685621286,0,0,0.370191491765402,0,1.33476084572875,0.982794975566015,2.24862112384854,3.24576194221605,2.894125917029,1.2731292589071,1.15078454980324,0,2.19649130550465,0,1.11642284300551,1.24815069245824,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0.502518772325447,0.238043640886014,1.17080188714679,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0.185194527369712,0,0,0,0,0,0,10.5013767981662,0.158167996790568,0,0.216010681643603,0,1.9652630737156,5.25970950900801,2.31429676030941,6.02038666563268,2.85152941241944,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,1.73870634628971,0.563047426353546,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0,0.44449345560323,0,0,0,0,0.188626341386076,0,0.192075457214608,0.287177344778066,0,0.115884325944855,0.578727661391115,0.412085900803307,0.294397840268795,0.685738504770831,0,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p@chr16:97881133..97881147,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=410 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:97881133..97881147,- | |||
|id=chr16:97881133..97881147,- | |||
|ontology_enrichment_celltype=CL:0002563!2.17e-10!9;CL:0002251!2.17e-10!9;CL:0000239!1.60e-07!6;CL:0000677!1.60e-07!6;CL:0000212!1.60e-07!6;CL:0000584!1.60e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.61e-18,9;CL:0002251,1.61e-18,9;CL:0000239,5.14e-13,6;CL:0000677,5.14e-13,6;CL:0000584,5.14e-13,6;CL:0000075,5.04e-11,7;CL:0002076,2.62e-10,15;CL:0000066,3.04e-10,25;CL:0000682,1.18e-07,3;CL:0000223,2.98e-07,20;CL:0002250,4.49e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.63e-28!59;UBERON:0000160!6.02e-27!43;UBERON:0001007!1.58e-21!128;UBERON:0001555!1.58e-21!128;UBERON:0007026!1.58e-21!128;UBERON:0004119!7.75e-21!130;UBERON:0000925!7.75e-21!130;UBERON:0006595!7.75e-21!130;UBERON:0004921!7.64e-20!126;UBERON:0004185!7.64e-20!126;UBERON:0000344!6.83e-16!15;UBERON:0001242!7.98e-14!13;UBERON:0000060!7.98e-14!13;UBERON:0001262!7.98e-14!13;UBERON:0004786!7.98e-14!13;UBERON:0003350!2.17e-10!9;UBERON:0004808!2.17e-10!9;UBERON:0001277!2.17e-10!9;UBERON:0004923!5.44e-10!24;UBERON:0000485!6.17e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.01e-32,47;UBERON:0000160,9.20e-32,31;UBERON:0000344,4.03e-29,15;UBERON:0001242,3.93e-25,13;UBERON:0001262,3.93e-25,13;UBERON:0004786,3.93e-25,13;UBERON:0001007,9.10e-23,116;UBERON:0001555,9.10e-23,116;UBERON:0007026,9.10e-23,116;UBERON:0004119,3.21e-22,118;UBERON:0000925,3.21e-22,118;UBERON:0006595,3.21e-22,118;UBERON:0004921,2.81e-20,114;UBERON:0004923,6.93e-19,24;UBERON:0003350,1.61e-18,9;UBERON:0004808,1.61e-18,9;UBERON:0001277,1.61e-18,9;UBERON:0000485,8.79e-15,11;UBERON:0011216,4.76e-08,194;UBERON:0002108,5.24e-08,4;UBERON:0003929,2.00e-07,55 | |||
|phase1_expression=0,4.88565570695105,6.82498859084304,3.93203474698879,4.00716583957078,11.7515490338323,10.2789561862031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.23970448894286,6.42345986988076,6.31655160526522,14.2151458732495,10.1271479362368,1.52018735565099,1.26015064879965,11.5299865540758,0,0,0,6.35473563452804,2.99222361645286,5.10423390655923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0.150722640552623,0.117588707135705,0,1.23597483867187,0,0,0,0,0,1.86391761218122,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,4.7601101999438,0.426576501070468,0.232236671860439,0.38660238396628,1.4117846723634,0.889512175379481,0.760902504450237,1.89811624617805,0.329397909448022,1.00534083520108,0.795825888164603,1.16978452271472,1.79763881730844,2.59365659849633,2.78797782556114,0,0.114248512609729,0,0,0,0.0701358198903186,0.316182685621286,0,0,0.370191491765402,0,1.33476084572875,0.982794975566015,2.24862112384854,3.24576194221605,2.894125917029,1.2731292589071,1.15078454980324,0,2.19649130550465,0,1.11642284300551,1.24815069245824,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0.502518772325447,0.238043640886014,1.17080188714679,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0.185194527369712,0,0,0,0,0,0,10.5013767981662,0.158167996790568,0,0.216010681643603,0,1.9652630737156,5.25970950900801,2.31429676030941,6.02038666563268,2.85152941241944,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,1.73870634628971,0.563047426353546,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0,0.44449345560323,0,0,0,0,0.188626341386076,0,0.192075457214608,0.287177344778066,0,0.115884325944855,0.578727661391115,0.412085900803307,0.294397840268795,0.685738504770831,0,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr16:97881133..97881147,- | |||
}} |
Revision as of 13:28, 13 September 2013
Short description: | p@chr16:97881133..97881147, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:97881133..97881147, - |
Coexpression cluster: | MCL_coexpression_mm9:410 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.61e-18 | 9 |
epithelial cell of alimentary canal | 1.61e-18 | 9 |
brush border epithelial cell | 5.14e-13 | 6 |
gut absorptive cell | 5.14e-13 | 6 |
enterocyte | 5.14e-13 | 6 |
columnar/cuboidal epithelial cell | 5.04e-11 | 7 |
endo-epithelial cell | 2.62e-10 | 15 |
epithelial cell | 3.04e-10 | 25 |
M cell of gut | 1.18e-07 | 3 |
endodermal cell | 2.98e-07 | 20 |
intestinal crypt stem cell | 4.49e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 6.01e-32 | 47 |
intestine | 9.20e-32 | 31 |
mucosa | 4.03e-29 | 15 |
intestinal mucosa | 3.93e-25 | 13 |
wall of intestine | 3.93e-25 | 13 |
gastrointestinal system mucosa | 3.93e-25 | 13 |
digestive system | 9.10e-23 | 116 |
digestive tract | 9.10e-23 | 116 |
primitive gut | 9.10e-23 | 116 |
endoderm-derived structure | 3.21e-22 | 118 |
endoderm | 3.21e-22 | 118 |
presumptive endoderm | 3.21e-22 | 118 |
subdivision of digestive tract | 2.81e-20 | 114 |
organ component layer | 6.93e-19 | 24 |
epithelium of mucosa | 1.61e-18 | 9 |
gastrointestinal system epithelium | 1.61e-18 | 9 |
intestinal epithelium | 1.61e-18 | 9 |
simple columnar epithelium | 8.79e-15 | 11 |
organ system subdivision | 4.76e-08 | 194 |
small intestine | 5.24e-08 | 4 |
gut epithelium | 2.00e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.