FFCP PHASE1:Mm9::chr16:96583335..96583347,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=72058|HGNC=|MCL_coexpression_id=3072|UniProt=D3YXH0,D3YXH1|association_with_transcript=-16bp_to_NM_001177887,uc008acx.2,uc008acy.2,uc008acz.2,uc008ada.2_5end|description=CAGE_peak_3_at_Igsf5_5end|id=chr16:96583335..96583347,+|ontology_enrichment_celltype=CL:0000066!1.30e-10!25;CL:0000223!3.02e-10!20;CL:0002563!2.82e-08!9;CL:0002251!2.82e-08!9;CL:0002076!5.35e-07!15|ontology_enrichment_celltype_v019_2=CL:0000066,1.02e-14,25;CL:0000223,7.55e-14,20;CL:0002563,1.61e-10,9;CL:0002251,1.61e-10,9;CL:0002076,1.82e-09,15;CL:0000239,1.47e-07,6;CL:0000677,1.47e-07,6;CL:0000584,1.47e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.87e-25!128;UBERON:0001555!1.87e-25!128;UBERON:0007026!1.87e-25!128;UBERON:0004119!3.50e-25!130;UBERON:0000925!3.50e-25!130;UBERON:0006595!3.50e-25!130;UBERON:0000160!1.15e-24!43;UBERON:0004921!4.16e-24!126;UBERON:0004185!4.16e-24!126;UBERON:0005409!1.47e-21!59;UBERON:0005177!2.19e-16!85;UBERON:0009569!4.72e-13!66;UBERON:0000344!2.84e-12!15;UBERON:0000466!5.15e-12!79;UBERON:0002100!6.26e-12!98;UBERON:0001242!4.42e-11!13;UBERON:0000060!4.42e-11!13;UBERON:0001262!4.42e-11!13;UBERON:0004786!4.42e-11!13;UBERON:0002108!7.44e-10!16;UBERON:0002365!1.36e-09!25;UBERON:0002330!1.36e-09!25;UBERON:0009854!2.81e-09!23;UBERON:0009856!2.81e-09!23;UBERON:0005172!5.29e-09!49;UBERON:0005173!5.29e-09!49;UBERON:0002417!5.29e-09!49;UBERON:0000916!5.29e-09!49;UBERON:0002107!1.65e-08!22;UBERON:0007499!1.65e-08!22;UBERON:0006925!1.65e-08!22;UBERON:0009497!1.65e-08!22;UBERON:0000015!1.65e-08!22;UBERON:0002423!1.65e-08!22;UBERON:0006235!1.65e-08!22;UBERON:0008835!1.65e-08!22;UBERON:0003894!1.65e-08!22;UBERON:0004161!1.65e-08!22;UBERON:0008836!1.65e-08!22;UBERON:0000481!2.16e-08!230;UBERON:0003350!2.82e-08!9;UBERON:0004808!2.82e-08!9;UBERON:0001277!2.82e-08!9;UBERON:0003104!2.89e-08!131;UBERON:0009142!2.89e-08!131;UBERON:0000077!2.94e-08!97;UBERON:0001041!4.06e-08!92;UBERON:0001045!8.53e-08!13;UBERON:0006554!8.73e-08!16;UBERON:0004923!1.91e-07!24;UBERON:0002113!3.58e-07!14;UBERON:0003918!3.58e-07!14;UBERON:0005095!3.58e-07!14;UBERON:0007687!3.58e-07!14;UBERON:0001008!5.13e-07!17;UBERON:0001264!5.67e-07!12;UBERON:0003922!5.67e-07!12;UBERON:0002114!5.67e-07!12;UBERON:0003923!5.67e-07!12;UBERON:0003924!5.67e-07!12;UBERON:0003921!5.67e-07!12;UBERON:0005911!6.02e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.48e-23,31;UBERON:0001007,3.18e-20,116;UBERON:0001555,3.18e-20,116;UBERON:0007026,3.18e-20,116;UBERON:0004119,1.49e-19,118;UBERON:0000925,1.49e-19,118;UBERON:0006595,1.49e-19,118;UBERON:0004921,8.49e-19,114;UBERON:0005409,2.48e-18,47;UBERON:0005177,4.98e-16,79;UBERON:0000344,7.52e-16,15;UBERON:0001242,2.93e-14,13;UBERON:0001262,2.93e-14,13;UBERON:0004786,2.93e-14,13;UBERON:0002100,2.39e-12,90;UBERON:0003350,1.61e-10,9;UBERON:0004808,1.61e-10,9;UBERON:0001277,1.61e-10,9;UBERON:0009569,8.51e-10,66;UBERON:0009854,1.11e-09,23;UBERON:0009856,1.11e-09,23;UBERON:0002365,2.85e-09,25;UBERON:0002330,2.85e-09,25;UBERON:0004923,3.93e-09,24;UBERON:0002107,9.85e-09,22;UBERON:0007499,9.85e-09,22;UBERON:0006925,9.85e-09,22;UBERON:0009497,9.85e-09,22;UBERON:0000015,9.85e-09,22;UBERON:0002423,9.85e-09,22;UBERON:0006235,9.85e-09,22;UBERON:0008835,9.85e-09,22;UBERON:0003894,9.85e-09,22;UBERON:0004161,9.85e-09,22;UBERON:0008836,9.85e-09,22;UBERON:0000485,4.21e-08,11;UBERON:0001264,1.40e-07,12;UBERON:0005172,1.71e-07,49;UBERON:0005173,1.71e-07,49;UBERON:0002417,1.71e-07,49;UBERON:0000916,1.71e-07,49;UBERON:0005911,6.50e-07,69|phase1_expression=0,6.63053274514786,5.0049916332849,2.41971369045464,4.00716583957078,3.86122325397347,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,3.03985603307473,2.2940928106717,3.44539178469012,2.58457197695445,3.66301095566011,3.6104449696711,3.52842181663903,3.76941868114018,0,0,0,5.77703239502549,2.32728503501889,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47837386442013,1.72084775396277,4.75979933595425,4.85732872474035,1.29955283489534,3.13618820968135,1.26399978118577,0,0,0,0,0,0,0,3.46385665617943,1.77351905832569,3.0331466700887,2.16949371466214,0,0,0,0.304465478312141,0,0,0.117588707135705,0,1.97755974187499,0,0,0,0,0,5.59175283654366,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0.124406970610093,1.76905930903572,1.26265113531884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,2.31293148088659,1.32225283331772,0,0.232236671860439,1.03093969057675,1.00841762311671,2.00140239460383,3.04361001780095,2.84717436926707,2.30578536613615,2.01068167040216,2.38747766449381,2.14460495831032,2.69645822596266,1.94524244887225,4.38110801159608,0.948339504765408,0.685491075658373,1.1270773567308,1.4255592949172,1.35766741017338,2.52488951605147,4.17361145020098,3.24742325555125,6.90794402502049,4.68909222902842,2.37162101669719,0,0,0,0.405720242777006,0.482354319504834,0.763877555344259,1.15078454980324,1.13494658742525,1.64736847912849,4.31304619582064,2.60498663367952,2.18426371180192,3.78868316920668,3.22915344339442,3.85954817090694,1.84753190166605,0,0,0.169745085775188,0.234690248288502,1.84256883185997,1.6663054862021,0.975668239288994,1.26108115284953,0.44292937929755,1.2756381492599,0.81931657357869,1.03610989119537,1.59113964439663,0,0,1.96705709207614,1.93155722413313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.494910368917606,1.32745138339963,0.971122544619926,2.41858845571801,1.69744571780308,2.06711325016541,2.15204603560749,2.06742634534577,2.18120237686503,2.85197902707777,3.16036757935816,2.10837217149998,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,0.661585194164886,0,0,0,0,0,3.20628920292836,0,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0,1.01659733563424,0.648032044930808,0.209088296014469,0,1.07891477107857,1.32245529160537,1.04702376793612,3.11075935900303,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,1.9318959403219,1.87682475451182,0.915758121336325,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.760437899670719,0.565879024158229,0.655490552289177,0,0.34461281373368,0,0.579421629724277,0.192909220463705,0,0.441596760403192,0.685738504770831,0.354951612318675,0.238436189947321,0.436039249896986,0.376437521661322,0.338458431566706,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0.237270036248348,0.29551344712669,0.818462086339379,0.464810523557898,0,0,0.467863216890817,0.429742108096597,0,0.220591419119515,0|short_description=p3@Igsf5}} | ||
|EntrezGene=72058 | |||
|HGNC= | |||
|MCL_coexpression_id=3072 | |||
|UniProt=D3YXH0,D3YXH1 | |||
|association_with_transcript=-16bp_to_NM_001177887,uc008acx.2,uc008acy.2,uc008acz.2,uc008ada.2_5end | |||
|description=CAGE_peak_3_at_Igsf5_5end | |||
|id=chr16:96583335..96583347,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.30e-10!25;CL:0000223!3.02e-10!20;CL:0002563!2.82e-08!9;CL:0002251!2.82e-08!9;CL:0002076!5.35e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.02e-14,25;CL:0000223,7.55e-14,20;CL:0002563,1.61e-10,9;CL:0002251,1.61e-10,9;CL:0002076,1.82e-09,15;CL:0000239,1.47e-07,6;CL:0000677,1.47e-07,6;CL:0000584,1.47e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.87e-25!128;UBERON:0001555!1.87e-25!128;UBERON:0007026!1.87e-25!128;UBERON:0004119!3.50e-25!130;UBERON:0000925!3.50e-25!130;UBERON:0006595!3.50e-25!130;UBERON:0000160!1.15e-24!43;UBERON:0004921!4.16e-24!126;UBERON:0004185!4.16e-24!126;UBERON:0005409!1.47e-21!59;UBERON:0005177!2.19e-16!85;UBERON:0009569!4.72e-13!66;UBERON:0000344!2.84e-12!15;UBERON:0000466!5.15e-12!79;UBERON:0002100!6.26e-12!98;UBERON:0001242!4.42e-11!13;UBERON:0000060!4.42e-11!13;UBERON:0001262!4.42e-11!13;UBERON:0004786!4.42e-11!13;UBERON:0002108!7.44e-10!16;UBERON:0002365!1.36e-09!25;UBERON:0002330!1.36e-09!25;UBERON:0009854!2.81e-09!23;UBERON:0009856!2.81e-09!23;UBERON:0005172!5.29e-09!49;UBERON:0005173!5.29e-09!49;UBERON:0002417!5.29e-09!49;UBERON:0000916!5.29e-09!49;UBERON:0002107!1.65e-08!22;UBERON:0007499!1.65e-08!22;UBERON:0006925!1.65e-08!22;UBERON:0009497!1.65e-08!22;UBERON:0000015!1.65e-08!22;UBERON:0002423!1.65e-08!22;UBERON:0006235!1.65e-08!22;UBERON:0008835!1.65e-08!22;UBERON:0003894!1.65e-08!22;UBERON:0004161!1.65e-08!22;UBERON:0008836!1.65e-08!22;UBERON:0000481!2.16e-08!230;UBERON:0003350!2.82e-08!9;UBERON:0004808!2.82e-08!9;UBERON:0001277!2.82e-08!9;UBERON:0003104!2.89e-08!131;UBERON:0009142!2.89e-08!131;UBERON:0000077!2.94e-08!97;UBERON:0001041!4.06e-08!92;UBERON:0001045!8.53e-08!13;UBERON:0006554!8.73e-08!16;UBERON:0004923!1.91e-07!24;UBERON:0002113!3.58e-07!14;UBERON:0003918!3.58e-07!14;UBERON:0005095!3.58e-07!14;UBERON:0007687!3.58e-07!14;UBERON:0001008!5.13e-07!17;UBERON:0001264!5.67e-07!12;UBERON:0003922!5.67e-07!12;UBERON:0002114!5.67e-07!12;UBERON:0003923!5.67e-07!12;UBERON:0003924!5.67e-07!12;UBERON:0003921!5.67e-07!12;UBERON:0005911!6.02e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.48e-23,31;UBERON:0001007,3.18e-20,116;UBERON:0001555,3.18e-20,116;UBERON:0007026,3.18e-20,116;UBERON:0004119,1.49e-19,118;UBERON:0000925,1.49e-19,118;UBERON:0006595,1.49e-19,118;UBERON:0004921,8.49e-19,114;UBERON:0005409,2.48e-18,47;UBERON:0005177,4.98e-16,79;UBERON:0000344,7.52e-16,15;UBERON:0001242,2.93e-14,13;UBERON:0001262,2.93e-14,13;UBERON:0004786,2.93e-14,13;UBERON:0002100,2.39e-12,90;UBERON:0003350,1.61e-10,9;UBERON:0004808,1.61e-10,9;UBERON:0001277,1.61e-10,9;UBERON:0009569,8.51e-10,66;UBERON:0009854,1.11e-09,23;UBERON:0009856,1.11e-09,23;UBERON:0002365,2.85e-09,25;UBERON:0002330,2.85e-09,25;UBERON:0004923,3.93e-09,24;UBERON:0002107,9.85e-09,22;UBERON:0007499,9.85e-09,22;UBERON:0006925,9.85e-09,22;UBERON:0009497,9.85e-09,22;UBERON:0000015,9.85e-09,22;UBERON:0002423,9.85e-09,22;UBERON:0006235,9.85e-09,22;UBERON:0008835,9.85e-09,22;UBERON:0003894,9.85e-09,22;UBERON:0004161,9.85e-09,22;UBERON:0008836,9.85e-09,22;UBERON:0000485,4.21e-08,11;UBERON:0001264,1.40e-07,12;UBERON:0005172,1.71e-07,49;UBERON:0005173,1.71e-07,49;UBERON:0002417,1.71e-07,49;UBERON:0000916,1.71e-07,49;UBERON:0005911,6.50e-07,69 | |||
|phase1_expression=0,6.63053274514786,5.0049916332849,2.41971369045464,4.00716583957078,3.86122325397347,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,3.03985603307473,2.2940928106717,3.44539178469012,2.58457197695445,3.66301095566011,3.6104449696711,3.52842181663903,3.76941868114018,0,0,0,5.77703239502549,2.32728503501889,4.08338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47837386442013,1.72084775396277,4.75979933595425,4.85732872474035,1.29955283489534,3.13618820968135,1.26399978118577,0,0,0,0,0,0,0,3.46385665617943,1.77351905832569,3.0331466700887,2.16949371466214,0,0,0,0.304465478312141,0,0,0.117588707135705,0,1.97755974187499,0,0,0,0,0,5.59175283654366,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0.124406970610093,1.76905930903572,1.26265113531884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,2.31293148088659,1.32225283331772,0,0.232236671860439,1.03093969057675,1.00841762311671,2.00140239460383,3.04361001780095,2.84717436926707,2.30578536613615,2.01068167040216,2.38747766449381,2.14460495831032,2.69645822596266,1.94524244887225,4.38110801159608,0.948339504765408,0.685491075658373,1.1270773567308,1.4255592949172,1.35766741017338,2.52488951605147,4.17361145020098,3.24742325555125,6.90794402502049,4.68909222902842,2.37162101669719,0,0,0,0.405720242777006,0.482354319504834,0.763877555344259,1.15078454980324,1.13494658742525,1.64736847912849,4.31304619582064,2.60498663367952,2.18426371180192,3.78868316920668,3.22915344339442,3.85954817090694,1.84753190166605,0,0,0.169745085775188,0.234690248288502,1.84256883185997,1.6663054862021,0.975668239288994,1.26108115284953,0.44292937929755,1.2756381492599,0.81931657357869,1.03610989119537,1.59113964439663,0,0,1.96705709207614,1.93155722413313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.494910368917606,1.32745138339963,0.971122544619926,2.41858845571801,1.69744571780308,2.06711325016541,2.15204603560749,2.06742634534577,2.18120237686503,2.85197902707777,3.16036757935816,2.10837217149998,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,0.661585194164886,0,0,0,0,0,3.20628920292836,0,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0,1.01659733563424,0.648032044930808,0.209088296014469,0,1.07891477107857,1.32245529160537,1.04702376793612,3.11075935900303,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,1.9318959403219,1.87682475451182,0.915758121336325,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.760437899670719,0.565879024158229,0.655490552289177,0,0.34461281373368,0,0.579421629724277,0.192909220463705,0,0.441596760403192,0.685738504770831,0.354951612318675,0.238436189947321,0.436039249896986,0.376437521661322,0.338458431566706,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0.237270036248348,0.29551344712669,0.818462086339379,0.464810523557898,0,0,0.467863216890817,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p3@Igsf5 | |||
}} |
Revision as of 13:27, 13 September 2013
Short description: | p3@Igsf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Igsf5_5end |
Coexpression cluster: | MCL_coexpression_mm9:3072 |
Association with transcript: | -16bp_to_NM_001177887, uc008acx.2, uc008acy.2, uc008acz.2, uc008ada.2_5end |
EntrezGene: | Igsf5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.02e-14 | 25 |
endodermal cell | 7.55e-14 | 20 |
intestinal epithelial cell | 1.61e-10 | 9 |
epithelial cell of alimentary canal | 1.61e-10 | 9 |
endo-epithelial cell | 1.82e-09 | 15 |
brush border epithelial cell | 1.47e-07 | 6 |
gut absorptive cell | 1.47e-07 | 6 |
enterocyte | 1.47e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.