FFCP PHASE1:Mm9::chr16:96583261..96583272,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72058|HGNC=|UniProt=D3YXH1|association_with_transcript=-2bp_to_ENSMUST00000113794_5end|description=CAGE_peak_4_at_Igsf5_5end|id=chr16:96583261..96583272,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,8.51e-09,25;CL:0000239,1.89e-08,6;CL:0000677,1.89e-08,6;CL:0000584,1.89e-08,6;CL:0000223,2.29e-07,20;CL:0000075,4.42e-07,7;CL:0000182,5.20e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!7.47e-22!130;UBERON:0000925!7.47e-22!130;UBERON:0006595!7.47e-22!130;UBERON:0001007!5.43e-21!128;UBERON:0001555!5.43e-21!128;UBERON:0007026!5.43e-21!128;UBERON:0004921!4.67e-20!126;UBERON:0004185!4.67e-20!126;UBERON:0005409!2.51e-15!59;UBERON:0005177!2.67e-14!85;UBERON:0000160!4.07e-14!43;UBERON:0009569!1.97e-11!66;UBERON:0000466!6.37e-11!79;UBERON:0000077!3.12e-10!97;UBERON:0002365!3.51e-10!25;UBERON:0002330!3.51e-10!25;UBERON:0002100!4.20e-10!98;UBERON:0009854!1.20e-09!23;UBERON:0009856!1.20e-09!23;UBERON:0001041!3.86e-09!92;UBERON:0002107!4.37e-09!22;UBERON:0007499!4.37e-09!22;UBERON:0006925!4.37e-09!22;UBERON:0009497!4.37e-09!22;UBERON:0000015!4.37e-09!22;UBERON:0002423!4.37e-09!22;UBERON:0006235!4.37e-09!22;UBERON:0008835!4.37e-09!22;UBERON:0003894!4.37e-09!22;UBERON:0004161!4.37e-09!22;UBERON:0008836!4.37e-09!22;UBERON:0000481!9.66e-09!230;UBERON:0000344!2.20e-08!15;UBERON:0003104!3.75e-08!131;UBERON:0009142!3.75e-08!131;UBERON:0006554!8.34e-08!16;UBERON:0001242!1.21e-07!13;UBERON:0000060!1.21e-07!13;UBERON:0001262!1.21e-07!13;UBERON:0004786!1.21e-07!13;UBERON:0005172!1.97e-07!49;UBERON:0005173!1.97e-07!49;UBERON:0002417!1.97e-07!49;UBERON:0000916!1.97e-07!49;UBERON:0005911!4.80e-07!69;UBERON:0001008!5.27e-07!17;UBERON:0002113!8.53e-07!14;UBERON:0003918!8.53e-07!14;UBERON:0005095!8.53e-07!14;UBERON:0007687!8.53e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.38e-16,79;UBERON:0001007,3.64e-13,116;UBERON:0001555,3.64e-13,116;UBERON:0007026,3.64e-13,116;UBERON:0002100,7.88e-13,90;UBERON:0004921,8.49e-13,114;UBERON:0004119,1.01e-12,118;UBERON:0000925,1.01e-12,118;UBERON:0006595,1.01e-12,118;UBERON:0009569,2.76e-12,66;UBERON:0009854,2.38e-10,23;UBERON:0009856,2.38e-10,23;UBERON:0005172,3.32e-10,49;UBERON:0005173,3.32e-10,49;UBERON:0002417,3.32e-10,49;UBERON:0000916,3.32e-10,49;UBERON:0002107,1.71e-09,22;UBERON:0007499,1.71e-09,22;UBERON:0006925,1.71e-09,22;UBERON:0009497,1.71e-09,22;UBERON:0000015,1.71e-09,22;UBERON:0002423,1.71e-09,22;UBERON:0006235,1.71e-09,22;UBERON:0008835,1.71e-09,22;UBERON:0003894,1.71e-09,22;UBERON:0004161,1.71e-09,22;UBERON:0008836,1.71e-09,22;UBERON:0002365,5.07e-09,25;UBERON:0002330,5.07e-09,25;UBERON:0001242,1.30e-08,13;UBERON:0001262,1.30e-08,13;UBERON:0004786,1.30e-08,13;UBERON:0000344,1.36e-08,15;UBERON:0002113,3.98e-08,14;UBERON:0003918,3.98e-08,14;UBERON:0011143,3.98e-08,14;UBERON:0005095,3.98e-08,14;UBERON:0007687,3.98e-08,14;UBERON:0005409,5.79e-08,47;UBERON:0003104,7.82e-08,61;UBERON:0009142,7.82e-08,61;UBERON:0006554,2.67e-07,18;UBERON:0005911,3.65e-07,69;UBERON:0001041,6.31e-07,80;UBERON:0001008,9.07e-07,19|phase1_expression=0,4.88565570695105,7.27998783023258,4.53696316960245,7.01254021924886,1.17515490338323,1.40167584357315,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.27564935226605,0,0,0.799962113967033,1.37645568640302,1.72269589234506,2.15380998079537,2.15471232685889,1.14014051673824,1.26015064879965,1.77384408524244,0,0,0,0.866554859253824,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,4.92769630792852,0.860423876981386,14.2793980078628,1.07940638327563,2.59910566979068,1.79210754838934,1.12355536105401,0,0,0,0,0,0,0,0.216491041011214,0,1.01104889002957,2.39786147410026,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0.41557608911912,0.162241263067758,0.101839363850316,0,0.252722758433675,1.47309299120532,0,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,4.29544417878937,0.528901133327089,0.213288250535234,0,0.257734922644187,1.00841762311671,0.444756087689741,0.380451252225118,0.949058123089023,0.658795818896044,0.754005626400808,0,0.38992817423824,1.79763881730844,1.29682829924817,2.58883655230677,1.32767530667157,0.456994050438915,4.50830942692322,1.62921062276251,2.32742984601151,2.03393877681924,1.89709611372772,2.80459281161244,3.61097074035162,3.70191491765402,2.66807364378434,0,0,0,0.405720242777006,0.72353147925725,1.2731292589071,0.863088412352432,0.810676133875177,2.19649130550465,4.31304619582064,3.34926852901653,2.18426371180192,3.78868316920668,3.04975602987251,1.92977408545347,1.29327233116623,0.189491411770485,0.325929952884052,0.848725428875941,0.704070744865506,1.17254380209271,0,1.75620283072019,1.26108115284953,0.44292937929755,0.797273843287435,1.63863314715738,1.89953480052485,1.88043776155965,0,0,0.983528546038072,0.827810238914197,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0,1.15479086080775,2.65490276679926,0,0.604647113929502,0.565815239267694,0.295301892880773,0.614870295887855,1.55056975900933,1.09060118843252,1.06949213515416,1.26414703174326,1.05418608574999,2.06271086496374,0,0,0,0,0,0,0,0,0.938686832254841,0.847328283455281,0.661585194164886,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0.632671987162271,0.813277868507395,1.62008011232702,1.67270636811575,2.18362563746178,1.48350781023303,2.89287095038676,7.85267825952089,0.129614973291793,1.24267862617385,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,7.72758376128762,0.375364950902364,0.549454872801795,0,2.00628841614145,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0,0,0.50695859978048,0.188626341386076,0.187283014939765,0.256100609619477,0.229741875822453,0,0,0.38581844092741,0,0,1.02860775715625,0,0.238436189947321,0.436039249896986,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p4@Igsf5}} | ||
|EntrezGene=72058 | |||
|HGNC= | |||
|UniProt=D3YXH1 | |||
|association_with_transcript=-2bp_to_ENSMUST00000113794_5end | |||
|description=CAGE_peak_4_at_Igsf5_5end | |||
|id=chr16:96583261..96583272,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.51e-09,25;CL:0000239,1.89e-08,6;CL:0000677,1.89e-08,6;CL:0000584,1.89e-08,6;CL:0000223,2.29e-07,20;CL:0000075,4.42e-07,7;CL:0000182,5.20e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.47e-22!130;UBERON:0000925!7.47e-22!130;UBERON:0006595!7.47e-22!130;UBERON:0001007!5.43e-21!128;UBERON:0001555!5.43e-21!128;UBERON:0007026!5.43e-21!128;UBERON:0004921!4.67e-20!126;UBERON:0004185!4.67e-20!126;UBERON:0005409!2.51e-15!59;UBERON:0005177!2.67e-14!85;UBERON:0000160!4.07e-14!43;UBERON:0009569!1.97e-11!66;UBERON:0000466!6.37e-11!79;UBERON:0000077!3.12e-10!97;UBERON:0002365!3.51e-10!25;UBERON:0002330!3.51e-10!25;UBERON:0002100!4.20e-10!98;UBERON:0009854!1.20e-09!23;UBERON:0009856!1.20e-09!23;UBERON:0001041!3.86e-09!92;UBERON:0002107!4.37e-09!22;UBERON:0007499!4.37e-09!22;UBERON:0006925!4.37e-09!22;UBERON:0009497!4.37e-09!22;UBERON:0000015!4.37e-09!22;UBERON:0002423!4.37e-09!22;UBERON:0006235!4.37e-09!22;UBERON:0008835!4.37e-09!22;UBERON:0003894!4.37e-09!22;UBERON:0004161!4.37e-09!22;UBERON:0008836!4.37e-09!22;UBERON:0000481!9.66e-09!230;UBERON:0000344!2.20e-08!15;UBERON:0003104!3.75e-08!131;UBERON:0009142!3.75e-08!131;UBERON:0006554!8.34e-08!16;UBERON:0001242!1.21e-07!13;UBERON:0000060!1.21e-07!13;UBERON:0001262!1.21e-07!13;UBERON:0004786!1.21e-07!13;UBERON:0005172!1.97e-07!49;UBERON:0005173!1.97e-07!49;UBERON:0002417!1.97e-07!49;UBERON:0000916!1.97e-07!49;UBERON:0005911!4.80e-07!69;UBERON:0001008!5.27e-07!17;UBERON:0002113!8.53e-07!14;UBERON:0003918!8.53e-07!14;UBERON:0005095!8.53e-07!14;UBERON:0007687!8.53e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.38e-16,79;UBERON:0001007,3.64e-13,116;UBERON:0001555,3.64e-13,116;UBERON:0007026,3.64e-13,116;UBERON:0002100,7.88e-13,90;UBERON:0004921,8.49e-13,114;UBERON:0004119,1.01e-12,118;UBERON:0000925,1.01e-12,118;UBERON:0006595,1.01e-12,118;UBERON:0009569,2.76e-12,66;UBERON:0009854,2.38e-10,23;UBERON:0009856,2.38e-10,23;UBERON:0005172,3.32e-10,49;UBERON:0005173,3.32e-10,49;UBERON:0002417,3.32e-10,49;UBERON:0000916,3.32e-10,49;UBERON:0002107,1.71e-09,22;UBERON:0007499,1.71e-09,22;UBERON:0006925,1.71e-09,22;UBERON:0009497,1.71e-09,22;UBERON:0000015,1.71e-09,22;UBERON:0002423,1.71e-09,22;UBERON:0006235,1.71e-09,22;UBERON:0008835,1.71e-09,22;UBERON:0003894,1.71e-09,22;UBERON:0004161,1.71e-09,22;UBERON:0008836,1.71e-09,22;UBERON:0002365,5.07e-09,25;UBERON:0002330,5.07e-09,25;UBERON:0001242,1.30e-08,13;UBERON:0001262,1.30e-08,13;UBERON:0004786,1.30e-08,13;UBERON:0000344,1.36e-08,15;UBERON:0002113,3.98e-08,14;UBERON:0003918,3.98e-08,14;UBERON:0011143,3.98e-08,14;UBERON:0005095,3.98e-08,14;UBERON:0007687,3.98e-08,14;UBERON:0005409,5.79e-08,47;UBERON:0003104,7.82e-08,61;UBERON:0009142,7.82e-08,61;UBERON:0006554,2.67e-07,18;UBERON:0005911,3.65e-07,69;UBERON:0001041,6.31e-07,80;UBERON:0001008,9.07e-07,19 | |||
|phase1_expression=0,4.88565570695105,7.27998783023258,4.53696316960245,7.01254021924886,1.17515490338323,1.40167584357315,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.27564935226605,0,0,0.799962113967033,1.37645568640302,1.72269589234506,2.15380998079537,2.15471232685889,1.14014051673824,1.26015064879965,1.77384408524244,0,0,0,0.866554859253824,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,4.92769630792852,0.860423876981386,14.2793980078628,1.07940638327563,2.59910566979068,1.79210754838934,1.12355536105401,0,0,0,0,0,0,0,0.216491041011214,0,1.01104889002957,2.39786147410026,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0.41557608911912,0.162241263067758,0.101839363850316,0,0.252722758433675,1.47309299120532,0,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,4.29544417878937,0.528901133327089,0.213288250535234,0,0.257734922644187,1.00841762311671,0.444756087689741,0.380451252225118,0.949058123089023,0.658795818896044,0.754005626400808,0,0.38992817423824,1.79763881730844,1.29682829924817,2.58883655230677,1.32767530667157,0.456994050438915,4.50830942692322,1.62921062276251,2.32742984601151,2.03393877681924,1.89709611372772,2.80459281161244,3.61097074035162,3.70191491765402,2.66807364378434,0,0,0,0.405720242777006,0.72353147925725,1.2731292589071,0.863088412352432,0.810676133875177,2.19649130550465,4.31304619582064,3.34926852901653,2.18426371180192,3.78868316920668,3.04975602987251,1.92977408545347,1.29327233116623,0.189491411770485,0.325929952884052,0.848725428875941,0.704070744865506,1.17254380209271,0,1.75620283072019,1.26108115284953,0.44292937929755,0.797273843287435,1.63863314715738,1.89953480052485,1.88043776155965,0,0,0.983528546038072,0.827810238914197,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0,1.15479086080775,2.65490276679926,0,0.604647113929502,0.565815239267694,0.295301892880773,0.614870295887855,1.55056975900933,1.09060118843252,1.06949213515416,1.26414703174326,1.05418608574999,2.06271086496374,0,0,0,0,0,0,0,0,0.938686832254841,0.847328283455281,0.661585194164886,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0.632671987162271,0.813277868507395,1.62008011232702,1.67270636811575,2.18362563746178,1.48350781023303,2.89287095038676,7.85267825952089,0.129614973291793,1.24267862617385,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,7.72758376128762,0.375364950902364,0.549454872801795,0,2.00628841614145,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0,0,0.50695859978048,0.188626341386076,0.187283014939765,0.256100609619477,0.229741875822453,0,0,0.38581844092741,0,0,1.02860775715625,0,0.238436189947321,0.436039249896986,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p4@Igsf5 | |||
}} |
Revision as of 13:27, 13 September 2013
Short description: | p4@Igsf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Igsf5_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENSMUST00000113794_5end |
EntrezGene: | Igsf5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.51e-09 | 25 |
brush border epithelial cell | 1.89e-08 | 6 |
gut absorptive cell | 1.89e-08 | 6 |
enterocyte | 1.89e-08 | 6 |
endodermal cell | 2.29e-07 | 20 |
columnar/cuboidal epithelial cell | 4.42e-07 | 7 |
hepatocyte | 5.20e-07 | 5 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.