FFCP PHASE1:Hg19::chr5:138209688..138209697,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1495|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2509|TSSclassifier=S|UniProt=E5RHJ5|association_with_transcript=-29bp_to_ENST00000518381_5end|coexpression_cluster_id=C24|description=CAGE_peak_29_at_CTNNA1_5end|id=chr5:138209688..138209697,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;9.46e-18;3!UBERON:0006601;7.16e-09;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!3.76e-36!86;UBERON:0000073!1.37e-32!94;UBERON:0001016!1.37e-32!94;UBERON:0000955!7.31e-31!69;UBERON:0006238!7.31e-31!69;UBERON:0001017!1.53e-29!82;UBERON:0001049!1.78e-28!57;UBERON:0005068!1.78e-28!57;UBERON:0006241!1.78e-28!57;UBERON:0007135!1.78e-28!57;UBERON:0002616!1.82e-27!59;UBERON:0003075!6.33e-25!86;UBERON:0007284!6.33e-25!86;UBERON:0002346!9.76e-24!90;UBERON:0002780!1.75e-23!41;UBERON:0001890!1.75e-23!41;UBERON:0006240!1.75e-23!41;UBERON:0003080!6.59e-23!42;UBERON:0001905!8.70e-23!2;UBERON:0002757!8.70e-23!2;UBERON:0010134!8.70e-23!2;UBERON:0002784!8.70e-23!2;UBERON:0005408!8.70e-23!2;UBERON:0001899!8.70e-23!2;UBERON:0003056!1.31e-22!61;UBERON:0000033!7.03e-22!123;UBERON:0000153!9.00e-21!129;UBERON:0007811!9.00e-21!129;UBERON:0004121!2.30e-17!169;UBERON:0000924!6.47e-17!173;UBERON:0006601!6.47e-17!173;UBERON:0007023!9.10e-16!115;UBERON:0001896!5.30e-15!3;UBERON:0005290!5.30e-15!3;UBERON:0010096!5.30e-15!3;UBERON:0001869!1.10e-14!32;UBERON:0001894!1.76e-14!7;UBERON:0006222!1.76e-14!7;UBERON:0002020!7.47e-14!34;UBERON:0003528!7.47e-14!34;UBERON:0001893!8.27e-14!34;UBERON:0002298!2.29e-12!8;UBERON:0001871!3.51e-12!7;UBERON:0001882!6.97e-12!1;UBERON:0005403!6.97e-12!1;UBERON:0003296!6.98e-12!4;UBERON:0010133!6.98e-12!4;UBERON:0002902!1.47e-11!1;UBERON:0009899!1.47e-11!1;UBERON:0007190!1.81e-11!1;UBERON:0002791!1.31e-10!33;UBERON:0000956!7.13e-10!25;UBERON:0000203!7.13e-10!25;UBERON:0000966!1.42e-09!5;UBERON:0005388!1.42e-09!5;UBERON:0001802!1.42e-09!5;UBERON:0000349!2.47e-09!5;UBERON:0004733!2.01e-08!12;UBERON:0002028!2.01e-08!12;UBERON:0007277!2.01e-08!12;UBERON:0001950!4.60e-08!20;UBERON:0004732!8.20e-08!13;UBERON:0000200!9.65e-08!6;UBERON:0002619!2.23e-07!22;UBERON:0000025!4.14e-07!194;UBERON:0003076!7.81e-07!15;UBERON:0003057!7.81e-07!15|ontology_enrichment_uberon_v019=UBERON:0001905;5.68e-99;2!UBERON:0002757;5.68e-99;2!UBERON:0010134;5.68e-99;2!UBERON:0005408;5.68e-99;2!UBERON:0001899;5.68e-99;2!UBERON:0003296;3.11e-50;4!UBERON:0010133;3.11e-50;4!UBERON:0002784;3.11e-50;4!UBERON:0001894;2.74e-29;7!UBERON:0001896;1.12e-17;3!UBERON:0005290;1.12e-17;3!UBERON:0000966;3.26e-11;5!UBERON:0005388;3.26e-11;5!UBERON:0001802;3.26e-11;5!UBERON:0002298;1.57e-09;6|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.68e-99,2;UBERON:0002757,5.68e-99,2;UBERON:0010134,5.68e-99,2;UBERON:0005408,5.68e-99,2;UBERON:0001899,5.68e-99,2;UBERON:0003296,3.11e-50,4;UBERON:0010133,3.11e-50,4;UBERON:0002784,3.11e-50,4;UBERON:0001894,2.74e-29,7;UBERON:0006222,2.74e-29,7;UBERON:0001896,1.12e-17,3;UBERON:0005290,1.12e-17,3;UBERON:0010096,1.12e-17,3;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0002298,1.57e-09,6;UBERON:0000073,3.71e-09,53;UBERON:0002616,3.71e-09,53;UBERON:0001049,1.02e-08,56;UBERON:0005068,1.02e-08,56;UBERON:0006241,1.02e-08,56;UBERON:0007135,1.02e-08,56;UBERON:0010371,2.22e-08,104;UBERON:0003056,4.28e-08,61;UBERON:0007023,8.86e-08,114;UBERON:0000955,2.97e-07,68;UBERON:0006238,2.97e-07,68;UBERON:0010314,8.99e-07,132;UBERON:0002368,9.98e-07,35|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1495 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2509 | |||
|TSSclassifier=S | |||
|UniProt=E5RHJ5 | |||
|association_with_transcript=-29bp_to_ENST00000518381_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_29_at_CTNNA1_5end | |||
|id=chr5:138209688..138209697,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.46e-18;3!UBERON:0006601;7.16e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.76e-36!86;UBERON:0000073!1.37e-32!94;UBERON:0001016!1.37e-32!94;UBERON:0000955!7.31e-31!69;UBERON:0006238!7.31e-31!69;UBERON:0001017!1.53e-29!82;UBERON:0001049!1.78e-28!57;UBERON:0005068!1.78e-28!57;UBERON:0006241!1.78e-28!57;UBERON:0007135!1.78e-28!57;UBERON:0002616!1.82e-27!59;UBERON:0003075!6.33e-25!86;UBERON:0007284!6.33e-25!86;UBERON:0002346!9.76e-24!90;UBERON:0002780!1.75e-23!41;UBERON:0001890!1.75e-23!41;UBERON:0006240!1.75e-23!41;UBERON:0003080!6.59e-23!42;UBERON:0001905!8.70e-23!2;UBERON:0002757!8.70e-23!2;UBERON:0010134!8.70e-23!2;UBERON:0002784!8.70e-23!2;UBERON:0005408!8.70e-23!2;UBERON:0001899!8.70e-23!2;UBERON:0003056!1.31e-22!61;UBERON:0000033!7.03e-22!123;UBERON:0000153!9.00e-21!129;UBERON:0007811!9.00e-21!129;UBERON:0004121!2.30e-17!169;UBERON:0000924!6.47e-17!173;UBERON:0006601!6.47e-17!173;UBERON:0007023!9.10e-16!115;UBERON:0001896!5.30e-15!3;UBERON:0005290!5.30e-15!3;UBERON:0010096!5.30e-15!3;UBERON:0001869!1.10e-14!32;UBERON:0001894!1.76e-14!7;UBERON:0006222!1.76e-14!7;UBERON:0002020!7.47e-14!34;UBERON:0003528!7.47e-14!34;UBERON:0001893!8.27e-14!34;UBERON:0002298!2.29e-12!8;UBERON:0001871!3.51e-12!7;UBERON:0001882!6.97e-12!1;UBERON:0005403!6.97e-12!1;UBERON:0003296!6.98e-12!4;UBERON:0010133!6.98e-12!4;UBERON:0002902!1.47e-11!1;UBERON:0009899!1.47e-11!1;UBERON:0007190!1.81e-11!1;UBERON:0002791!1.31e-10!33;UBERON:0000956!7.13e-10!25;UBERON:0000203!7.13e-10!25;UBERON:0000966!1.42e-09!5;UBERON:0005388!1.42e-09!5;UBERON:0001802!1.42e-09!5;UBERON:0000349!2.47e-09!5;UBERON:0004733!2.01e-08!12;UBERON:0002028!2.01e-08!12;UBERON:0007277!2.01e-08!12;UBERON:0001950!4.60e-08!20;UBERON:0004732!8.20e-08!13;UBERON:0000200!9.65e-08!6;UBERON:0002619!2.23e-07!22;UBERON:0000025!4.14e-07!194;UBERON:0003076!7.81e-07!15;UBERON:0003057!7.81e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.68e-99;2!UBERON:0002757;5.68e-99;2!UBERON:0010134;5.68e-99;2!UBERON:0005408;5.68e-99;2!UBERON:0001899;5.68e-99;2!UBERON:0003296;3.11e-50;4!UBERON:0010133;3.11e-50;4!UBERON:0002784;3.11e-50;4!UBERON:0001894;2.74e-29;7!UBERON:0001896;1.12e-17;3!UBERON:0005290;1.12e-17;3!UBERON:0000966;3.26e-11;5!UBERON:0005388;3.26e-11;5!UBERON:0001802;3.26e-11;5!UBERON:0002298;1.57e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.68e-99,2;UBERON:0002757,5.68e-99,2;UBERON:0010134,5.68e-99,2;UBERON:0005408,5.68e-99,2;UBERON:0001899,5.68e-99,2;UBERON:0003296,3.11e-50,4;UBERON:0010133,3.11e-50,4;UBERON:0002784,3.11e-50,4;UBERON:0001894,2.74e-29,7;UBERON:0006222,2.74e-29,7;UBERON:0001896,1.12e-17,3;UBERON:0005290,1.12e-17,3;UBERON:0010096,1.12e-17,3;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0002298,1.57e-09,6;UBERON:0000073,3.71e-09,53;UBERON:0002616,3.71e-09,53;UBERON:0001049,1.02e-08,56;UBERON:0005068,1.02e-08,56;UBERON:0006241,1.02e-08,56;UBERON:0007135,1.02e-08,56;UBERON:0010371,2.22e-08,104;UBERON:0003056,4.28e-08,61;UBERON:0007023,8.86e-08,114;UBERON:0000955,2.97e-07,68;UBERON:0006238,2.97e-07,68;UBERON:0010314,8.99e-07,132;UBERON:0002368,9.98e-07,35 | |||
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|short_description=p29@CTNNA1 | |||
}} |
Revision as of 13:26, 13 September 2013
Short description: | p29@CTNNA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_29_at_CTNNA1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -29bp_to_ENST00000518381_5end |
EntrezGene: | CTNNA1 |
HGNC: | 2509 |
UniProt: | E5RHJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.68e-99 | 2 |
regional part of epithalamus | 5.68e-99 | 2 |
secretory circumventricular organ | 5.68e-99 | 2 |
circumventricular organ | 5.68e-99 | 2 |
epithalamus | 5.68e-99 | 2 |
gland of diencephalon | 3.11e-50 | 4 |
neuroendocrine gland | 3.11e-50 | 4 |
regional part of diencephalon | 3.11e-50 | 4 |
diencephalon | 2.74e-29 | 7 |
future diencephalon | 2.74e-29 | 7 |
medulla oblongata | 1.12e-17 | 3 |
myelencephalon | 1.12e-17 | 3 |
future myelencephalon | 1.12e-17 | 3 |
neural plate | 2.17e-10 | 82 |
presumptive neural plate | 2.17e-10 | 82 |
neurectoderm | 5.98e-10 | 86 |
retina | 1.44e-09 | 6 |
photoreceptor array | 1.44e-09 | 6 |
posterior segment of eyeball | 1.44e-09 | 6 |
brainstem | 1.57e-09 | 6 |
regional part of nervous system | 3.71e-09 | 53 |
regional part of brain | 3.71e-09 | 53 |
neural tube | 1.02e-08 | 56 |
neural rod | 1.02e-08 | 56 |
future spinal cord | 1.02e-08 | 56 |
neural keel | 1.02e-08 | 56 |
ecto-epithelium | 2.22e-08 | 104 |
pre-chordal neural plate | 4.28e-08 | 61 |
adult organism | 8.86e-08 | 114 |
brain | 2.97e-07 | 68 |
future brain | 2.97e-07 | 68 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |
endocrine gland | 9.98e-07 | 35 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.