FFCP PHASE1:Hg19::chr5:134369848..134369853,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5307|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9004|TSSclassifier=S|UniProt=P78337|association_with_transcript=110bp_to_NM_002653,uc010jea.2_5end|description=CAGE_peak_6_at_PITX1_5end|id=chr5:134369848..134369853,-|ontology_enrichment_celltype=CL:0002076!6.14e-11!43;CL:0000066!9.30e-10!254;CL:0000223!1.64e-08!59;CL:0002368!1.58e-07!13|ontology_enrichment_celltype_v019=CL:0002368;4.79e-07;13!CL:0002202;5.28e-07;9!CL:0002632;5.28e-07;9|ontology_enrichment_celltype_v019_2=CL:0002202,4.22e-07,9;CL:0002632,4.22e-07,9;CL:0002368,4.84e-07,13;CL:0002076,5.90e-07,42|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!1.23e-12!106;DOID:0050687!2.20e-11!143;DOID:162!1.29e-10!235;DOID:14566!6.06e-10!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.67e-19!169;UBERON:0000925!1.67e-19!169;UBERON:0006595!1.67e-19!169;UBERON:0001007!5.27e-16!155;UBERON:0001555!5.27e-16!155;UBERON:0007026!5.27e-16!155;UBERON:0001004!7.56e-14!72;UBERON:0004921!1.06e-13!129;UBERON:0004185!1.06e-13!129;UBERON:0000161!9.03e-13!35;UBERON:0000077!1.08e-11!130;UBERON:0001737!5.61e-11!9;UBERON:0000065!3.98e-10!53;UBERON:0003104!1.82e-09!238;UBERON:0009142!1.82e-09!238;UBERON:0001557!4.39e-09!19;UBERON:0000072!6.19e-09!46;UBERON:0001041!1.38e-08!98;UBERON:0000162!1.20e-07!14;UBERON:0001353!1.20e-07!14;UBERON:0000163!1.20e-07!14;UBERON:0006866!1.20e-07!14;UBERON:0000164!1.20e-07!14;UBERON:0000931!1.20e-07!14;UBERON:0000165!4.83e-07!28;UBERON:0000930!4.83e-07!28;UBERON:0004122!6.06e-07!15;UBERON:0000166!8.28e-07!21;UBERON:0008947!8.77e-07!38;UBERON:0003258!8.77e-07!38|ontology_enrichment_uberon_v019=UBERON:0001737;2.12e-18;9!UBERON:0001557;2.12e-18;9!UBERON:0001041;4.51e-12;14!UBERON:0001043;9.68e-12;3!UBERON:0000072;4.20e-09;37!UBERON:0000007;6.47e-09;2!UBERON:0000065;2.56e-08;44!UBERON:0004921;2.66e-08;33|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.08e-18,9;UBERON:0001557,4.62e-17,19;UBERON:0004921,7.13e-16,118;UBERON:0001041,6.67e-15,87;UBERON:0004119,4.08e-13,160;UBERON:0000925,4.08e-13,160;UBERON:0006595,4.08e-13,160;UBERON:0001007,7.52e-13,145;UBERON:0001555,7.52e-13,145;UBERON:0007026,7.52e-13,145;UBERON:0000072,3.96e-12,47;UBERON:0001043,1.01e-11,3;UBERON:0009143,1.01e-11,3;UBERON:0000065,1.07e-11,54;UBERON:0001004,1.21e-11,74;UBERON:0008947,2.15e-09,38;UBERON:0003258,2.15e-09,38;UBERON:0000007,7.29e-09,2;UBERON:0011216,2.39e-07,223|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0,3.69754010166788,1.16200800870452,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,0,0.724232594804119,0.795285947051099,1.94653948121054,0,0,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.625592599359821,0,0,0.612975591598039,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0.57978255948989,0.818238361772504,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,2.83936320095625,0.842923450390509,0.964044119533928,1.10293972732394,1.30727666455444,1.42362371466658,1.61797569792197,1.96221465125346,1.53898862778556,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75918045801206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0.664225598535437,0,0.60818530127658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,7.5506410927435,1.60740227430449,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0.574265537996172,0,0,0,0,0,0,0,0.290033387828457,0,0,0.330569830721956,0.768760269460425,0.255225424989168,1.0115778085555,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0.255897791311334,0.42793898803392,0,0,2.15846949099978,0,0.117812402345686,0,0,0,1.46290121726877,0,0,0.818999468447914,8.48432591722277,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0,0.717056761020258,0.0982490410131212,0.35667105148125,0,0,0.329294892959902,0,0.349934720244983,0.288666338176536,4.02181365321472,7.62236894029258,0.0941438007767792,0,1.68471475667626,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0.748562161632879,0.146508179271894,0.242721043499027,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.539210106883961,1.9692329214317,7.1620131831762,0.887790650732402,0,0,0,0,0,0,0.524759999977174,0,0.910347586283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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5307 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9004 | |||
|TSSclassifier=S | |||
|UniProt=P78337 | |||
|association_with_transcript=110bp_to_NM_002653,uc010jea.2_5end | |||
|description=CAGE_peak_6_at_PITX1_5end | |||
|id=chr5:134369848..134369853,- | |||
|ontology_enrichment_celltype=CL:0002076!6.14e-11!43;CL:0000066!9.30e-10!254;CL:0000223!1.64e-08!59;CL:0002368!1.58e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.79e-07;13!CL:0002202;5.28e-07;9!CL:0002632;5.28e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,4.22e-07,9;CL:0002632,4.22e-07,9;CL:0002368,4.84e-07,13;CL:0002076,5.90e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.23e-12!106;DOID:0050687!2.20e-11!143;DOID:162!1.29e-10!235;DOID:14566!6.06e-10!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.67e-19!169;UBERON:0000925!1.67e-19!169;UBERON:0006595!1.67e-19!169;UBERON:0001007!5.27e-16!155;UBERON:0001555!5.27e-16!155;UBERON:0007026!5.27e-16!155;UBERON:0001004!7.56e-14!72;UBERON:0004921!1.06e-13!129;UBERON:0004185!1.06e-13!129;UBERON:0000161!9.03e-13!35;UBERON:0000077!1.08e-11!130;UBERON:0001737!5.61e-11!9;UBERON:0000065!3.98e-10!53;UBERON:0003104!1.82e-09!238;UBERON:0009142!1.82e-09!238;UBERON:0001557!4.39e-09!19;UBERON:0000072!6.19e-09!46;UBERON:0001041!1.38e-08!98;UBERON:0000162!1.20e-07!14;UBERON:0001353!1.20e-07!14;UBERON:0000163!1.20e-07!14;UBERON:0006866!1.20e-07!14;UBERON:0000164!1.20e-07!14;UBERON:0000931!1.20e-07!14;UBERON:0000165!4.83e-07!28;UBERON:0000930!4.83e-07!28;UBERON:0004122!6.06e-07!15;UBERON:0000166!8.28e-07!21;UBERON:0008947!8.77e-07!38;UBERON:0003258!8.77e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.12e-18;9!UBERON:0001557;2.12e-18;9!UBERON:0001041;4.51e-12;14!UBERON:0001043;9.68e-12;3!UBERON:0000072;4.20e-09;37!UBERON:0000007;6.47e-09;2!UBERON:0000065;2.56e-08;44!UBERON:0004921;2.66e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.08e-18,9;UBERON:0001557,4.62e-17,19;UBERON:0004921,7.13e-16,118;UBERON:0001041,6.67e-15,87;UBERON:0004119,4.08e-13,160;UBERON:0000925,4.08e-13,160;UBERON:0006595,4.08e-13,160;UBERON:0001007,7.52e-13,145;UBERON:0001555,7.52e-13,145;UBERON:0007026,7.52e-13,145;UBERON:0000072,3.96e-12,47;UBERON:0001043,1.01e-11,3;UBERON:0009143,1.01e-11,3;UBERON:0000065,1.07e-11,54;UBERON:0001004,1.21e-11,74;UBERON:0008947,2.15e-09,38;UBERON:0003258,2.15e-09,38;UBERON:0000007,7.29e-09,2;UBERON:0011216,2.39e-07,223 | |||
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|short_description=p6@PITX1 | |||
}} |
Revision as of 13:15, 13 September 2013
Short description: | p6@PITX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PITX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 110bp_to_NM_002653, uc010jea.2_5end |
EntrezGene: | PITX1 |
HGNC: | 9004 |
UniProt: | P78337 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 4.22e-07 | 9 |
epithelial cell of lower respiratory tract | 4.22e-07 | 9 |
respiratory epithelial cell | 4.84e-07 | 13 |
endo-epithelial cell | 5.90e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.08e-18 | 9 |
upper respiratory tract | 4.62e-17 | 19 |
subdivision of digestive tract | 7.13e-16 | 118 |
foregut | 6.67e-15 | 87 |
endoderm-derived structure | 4.08e-13 | 160 |
endoderm | 4.08e-13 | 160 |
presumptive endoderm | 4.08e-13 | 160 |
digestive system | 7.52e-13 | 145 |
digestive tract | 7.52e-13 | 145 |
primitive gut | 7.52e-13 | 145 |
segment of respiratory tract | 3.96e-12 | 47 |
esophagus | 1.01e-11 | 3 |
esophageal region | 1.01e-11 | 3 |
respiratory tract | 1.07e-11 | 54 |
respiratory system | 1.21e-11 | 74 |
respiratory primordium | 2.15e-09 | 38 |
endoderm of foregut | 2.15e-09 | 38 |
pituitary gland | 7.29e-09 | 2 |
organ system subdivision | 2.39e-07 | 223 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.