FFCP PHASE1:Mm9::chr16:45654163..45654174,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=212998|HGNC=|MCL_coexpression_id=12|UniProt=E9QP50,Q8C5C9|association_with_transcript=56bp_to_ENSMUST00000036732,NM_145389,uc012agh.1_5end|description=CAGE_peak_2_at_BC016579_5end|id=chr16:45654163..45654174,-|ontology_enrichment_celltype=CL:0002563!7.60e-13!9;CL:0002251!7.60e-13!9;CL:0000239!1.51e-09!6;CL:0000677!1.51e-09!6;CL:0000212!1.51e-09!6;CL:0000584!1.51e-09!6;CL:0000075!5.49e-08!7|ontology_enrichment_celltype_v019_2=CL:0002563,1.19e-24,9;CL:0002251,1.19e-24,9;CL:0000239,6.85e-18,6;CL:0000677,6.85e-18,6;CL:0000584,6.85e-18,6;CL:0000075,3.12e-15,7;CL:0000066,2.46e-14,25;CL:0002076,3.99e-14,15;CL:0000223,3.53e-10,20;CL:0000682,1.77e-09,3;CL:0002250,2.29e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!6.55e-28!59;UBERON:0000160!1.30e-22!43;UBERON:0000344!3.85e-20!15;UBERON:0001242!9.95e-18!13;UBERON:0000060!9.95e-18!13;UBERON:0001262!9.95e-18!13;UBERON:0004786!9.95e-18!13;UBERON:0003350!7.60e-13!9;UBERON:0004808!7.60e-13!9;UBERON:0001277!7.60e-13!9;UBERON:0004923!4.40e-12!24;UBERON:0001007!7.82e-12!128;UBERON:0001555!7.82e-12!128;UBERON:0007026!7.82e-12!128;UBERON:0004119!1.92e-11!130;UBERON:0000925!1.92e-11!130;UBERON:0006595!1.92e-11!130;UBERON:0004921!1.69e-10!126;UBERON:0004185!1.69e-10!126;UBERON:0000485!4.88e-10!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.04e-47,31;UBERON:0000344,1.16e-39,15;UBERON:0005409,7.67e-38,47;UBERON:0001242,1.08e-34,13;UBERON:0001262,1.08e-34,13;UBERON:0004786,1.08e-34,13;UBERON:0003350,1.19e-24,9;UBERON:0004808,1.19e-24,9;UBERON:0001277,1.19e-24,9;UBERON:0004923,1.56e-23,24;UBERON:0000485,7.21e-20,11;UBERON:0001007,8.87e-16,116;UBERON:0001555,8.87e-16,116;UBERON:0007026,8.87e-16,116;UBERON:0004119,2.07e-15,118;UBERON:0000925,2.07e-15,118;UBERON:0006595,2.07e-15,118;UBERON:0004921,1.76e-13,114;UBERON:0002108,7.05e-11,4;UBERON:0000331,1.33e-08,3;UBERON:0002116,1.33e-08,3;UBERON:0001204,1.33e-08,3;UBERON:0001168,1.33e-08,3|phase1_expression=0,7.67745896806594,9.09998478779072,7.56160528267075,11.520601788766,4.02910252588535,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,3.67054849707472,6.89078356938024,3.87685796543167,5.817723282519,2.66032787238923,1.26015064879965,5.32153225572731,0,0,0,2.02196133825892,1.99481574430191,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9038198384653,4.7601101999438,0,0,0.257734922644187,0.80673409849337,0.444756087689741,0.951128130562796,0.949058123089023,1.64698954724011,1.75934646160189,1.98956472041151,2.33956904542944,5.39291645192533,4.53889904736858,3.98282546508734,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0.301564624640779,0.477489376012546,0.328281799490123,2.33184669303881,0,0,0,0,0.188368457004691,0,0,0,0,0,6.68269432610579,0.316335993581135,0,0.216010681643603,0.418176592028937,0.218362563746178,0.809186078308924,0.826534557253359,1.30877970992015,4.40690909192096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p2@BC016579}} | ||
|EntrezGene=212998 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=E9QP50,Q8C5C9 | |||
|association_with_transcript=56bp_to_ENSMUST00000036732,NM_145389,uc012agh.1_5end | |||
|description=CAGE_peak_2_at_BC016579_5end | |||
|id=chr16:45654163..45654174,- | |||
|ontology_enrichment_celltype=CL:0002563!7.60e-13!9;CL:0002251!7.60e-13!9;CL:0000239!1.51e-09!6;CL:0000677!1.51e-09!6;CL:0000212!1.51e-09!6;CL:0000584!1.51e-09!6;CL:0000075!5.49e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.19e-24,9;CL:0002251,1.19e-24,9;CL:0000239,6.85e-18,6;CL:0000677,6.85e-18,6;CL:0000584,6.85e-18,6;CL:0000075,3.12e-15,7;CL:0000066,2.46e-14,25;CL:0002076,3.99e-14,15;CL:0000223,3.53e-10,20;CL:0000682,1.77e-09,3;CL:0002250,2.29e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.55e-28!59;UBERON:0000160!1.30e-22!43;UBERON:0000344!3.85e-20!15;UBERON:0001242!9.95e-18!13;UBERON:0000060!9.95e-18!13;UBERON:0001262!9.95e-18!13;UBERON:0004786!9.95e-18!13;UBERON:0003350!7.60e-13!9;UBERON:0004808!7.60e-13!9;UBERON:0001277!7.60e-13!9;UBERON:0004923!4.40e-12!24;UBERON:0001007!7.82e-12!128;UBERON:0001555!7.82e-12!128;UBERON:0007026!7.82e-12!128;UBERON:0004119!1.92e-11!130;UBERON:0000925!1.92e-11!130;UBERON:0006595!1.92e-11!130;UBERON:0004921!1.69e-10!126;UBERON:0004185!1.69e-10!126;UBERON:0000485!4.88e-10!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.04e-47,31;UBERON:0000344,1.16e-39,15;UBERON:0005409,7.67e-38,47;UBERON:0001242,1.08e-34,13;UBERON:0001262,1.08e-34,13;UBERON:0004786,1.08e-34,13;UBERON:0003350,1.19e-24,9;UBERON:0004808,1.19e-24,9;UBERON:0001277,1.19e-24,9;UBERON:0004923,1.56e-23,24;UBERON:0000485,7.21e-20,11;UBERON:0001007,8.87e-16,116;UBERON:0001555,8.87e-16,116;UBERON:0007026,8.87e-16,116;UBERON:0004119,2.07e-15,118;UBERON:0000925,2.07e-15,118;UBERON:0006595,2.07e-15,118;UBERON:0004921,1.76e-13,114;UBERON:0002108,7.05e-11,4;UBERON:0000331,1.33e-08,3;UBERON:0002116,1.33e-08,3;UBERON:0001204,1.33e-08,3;UBERON:0001168,1.33e-08,3 | |||
|phase1_expression=0,7.67745896806594,9.09998478779072,7.56160528267075,11.520601788766,4.02910252588535,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,3.67054849707472,6.89078356938024,3.87685796543167,5.817723282519,2.66032787238923,1.26015064879965,5.32153225572731,0,0,0,2.02196133825892,1.99481574430191,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9038198384653,4.7601101999438,0,0,0.257734922644187,0.80673409849337,0.444756087689741,0.951128130562796,0.949058123089023,1.64698954724011,1.75934646160189,1.98956472041151,2.33956904542944,5.39291645192533,4.53889904736858,3.98282546508734,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0.301564624640779,0.477489376012546,0.328281799490123,2.33184669303881,0,0,0,0,0.188368457004691,0,0,0,0,0,6.68269432610579,0.316335993581135,0,0.216010681643603,0.418176592028937,0.218362563746178,0.809186078308924,0.826534557253359,1.30877970992015,4.40690909192096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p2@BC016579 | |||
}} |
Revision as of 12:46, 13 September 2013
Short description: | p2@BC016579 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_BC016579_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 56bp_to_ENSMUST00000036732, NM_145389, uc012agh.1_5end |
EntrezGene: | BC016579 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.19e-24 | 9 |
epithelial cell of alimentary canal | 1.19e-24 | 9 |
brush border epithelial cell | 6.85e-18 | 6 |
gut absorptive cell | 6.85e-18 | 6 |
enterocyte | 6.85e-18 | 6 |
columnar/cuboidal epithelial cell | 3.12e-15 | 7 |
epithelial cell | 2.46e-14 | 25 |
endo-epithelial cell | 3.99e-14 | 15 |
endodermal cell | 3.53e-10 | 20 |
M cell of gut | 1.77e-09 | 3 |
intestinal crypt stem cell | 2.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.04e-47 | 31 |
mucosa | 1.16e-39 | 15 |
gastrointestinal system | 7.67e-38 | 47 |
intestinal mucosa | 1.08e-34 | 13 |
wall of intestine | 1.08e-34 | 13 |
gastrointestinal system mucosa | 1.08e-34 | 13 |
epithelium of mucosa | 1.19e-24 | 9 |
gastrointestinal system epithelium | 1.19e-24 | 9 |
intestinal epithelium | 1.19e-24 | 9 |
organ component layer | 1.56e-23 | 24 |
simple columnar epithelium | 7.21e-20 | 11 |
digestive system | 8.87e-16 | 116 |
digestive tract | 8.87e-16 | 116 |
primitive gut | 8.87e-16 | 116 |
endoderm-derived structure | 2.07e-15 | 118 |
endoderm | 2.07e-15 | 118 |
presumptive endoderm | 2.07e-15 | 118 |
subdivision of digestive tract | 1.76e-13 | 114 |
small intestine | 7.05e-11 | 4 |
ileal mucosa | 1.33e-08 | 3 |
ileum | 1.33e-08 | 3 |
mucosa of small intestine | 1.33e-08 | 3 |
wall of small intestine | 1.33e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.