FFCP PHASE1:Mm9::chr16:36708375..36708390,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=97|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:36708375..36708390,+|id=chr16:36708375..36708390,+|ontology_enrichment_celltype=CL:0000349!4.23e-08!3;CL:0000351!4.23e-08!3|ontology_enrichment_celltype_v019_2=CL:0000349,5.00e-18,3;CL:0000351,5.00e-18,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005085!3.38e-09!13;UBERON:0000358!4.23e-08!3;UBERON:0000307!4.23e-08!3;UBERON:0000970!9.63e-08!9;UBERON:0000019!9.63e-08!9;UBERON:0000047!9.63e-08!9;UBERON:0004088!9.63e-08!9;UBERON:0002104!9.63e-08!9;UBERON:0001456!9.63e-08!9;UBERON:0003072!9.63e-08!9;UBERON:0003071!9.63e-08!9;UBERON:0004128!9.63e-08!9;UBERON:0000020!1.22e-07!12;UBERON:0001032!1.22e-07!12;UBERON:0004456!1.22e-07!12;UBERON:0005631!2.13e-07!3;UBERON:0000478!2.13e-07!3;UBERON:0000158!2.13e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000358,5.00e-18,3;UBERON:0000307,5.00e-18,3;UBERON:0007010,5.00e-18,3;UBERON:0001153,1.16e-13,1;UBERON:0001045,1.16e-13,1;UBERON:0000998,2.06e-13,1;UBERON:0007194,2.06e-13,1;UBERON:0006868,2.06e-13,1;UBERON:0001987,1.32e-07,2;UBERON:0003124,1.32e-07,2;UBERON:0004340,1.32e-07,2;UBERON:0001155,1.76e-07,2;UBERON:0000059,1.76e-07,2;UBERON:0010147,2.35e-07,2;UBERON:0003937,2.35e-07,2;UBERON:0005399,2.35e-07,2|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0.84877930359606,0.0850432901510698,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,2.31486041475121,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0.189667900953082,0,0,0,0,0.210407459670956,0.252946148497029,0,0.627994911365499,0.863780147452604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,3.1774810629573,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32978930061097,5.20340368334959,0.671538465456314,0,0.187682475451182,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr16:36708375..36708390,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:36708375..36708390,+ | |||
|id=chr16:36708375..36708390,+ | |||
|ontology_enrichment_celltype=CL:0000349!4.23e-08!3;CL:0000351!4.23e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.00e-18,3;CL:0000351,5.00e-18,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005085!3.38e-09!13;UBERON:0000358!4.23e-08!3;UBERON:0000307!4.23e-08!3;UBERON:0000970!9.63e-08!9;UBERON:0000019!9.63e-08!9;UBERON:0000047!9.63e-08!9;UBERON:0004088!9.63e-08!9;UBERON:0002104!9.63e-08!9;UBERON:0001456!9.63e-08!9;UBERON:0003072!9.63e-08!9;UBERON:0003071!9.63e-08!9;UBERON:0004128!9.63e-08!9;UBERON:0000020!1.22e-07!12;UBERON:0001032!1.22e-07!12;UBERON:0004456!1.22e-07!12;UBERON:0005631!2.13e-07!3;UBERON:0000478!2.13e-07!3;UBERON:0000158!2.13e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,5.00e-18,3;UBERON:0000307,5.00e-18,3;UBERON:0007010,5.00e-18,3;UBERON:0001153,1.16e-13,1;UBERON:0001045,1.16e-13,1;UBERON:0000998,2.06e-13,1;UBERON:0007194,2.06e-13,1;UBERON:0006868,2.06e-13,1;UBERON:0001987,1.32e-07,2;UBERON:0003124,1.32e-07,2;UBERON:0004340,1.32e-07,2;UBERON:0001155,1.76e-07,2;UBERON:0000059,1.76e-07,2;UBERON:0010147,2.35e-07,2;UBERON:0003937,2.35e-07,2;UBERON:0005399,2.35e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0.84877930359606,0.0850432901510698,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,2.31486041475121,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0.189667900953082,0,0,0,0,0.210407459670956,0.252946148497029,0,0.627994911365499,0.863780147452604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,3.1774810629573,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32978930061097,5.20340368334959,0.671538465456314,0,0.187682475451182,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr16:36708375..36708390,+ | |||
}} |
Revision as of 12:34, 13 September 2013
Short description: | p@chr16:36708375..36708390, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:36708375..36708390, + |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.00e-18 | 3 |
trophoblast cell | 5.00e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 5.00e-18 | 3 |
blastula | 5.00e-18 | 3 |
cleaving embryo | 5.00e-18 | 3 |
caecum | 1.16e-13 | 1 |
midgut | 1.16e-13 | 1 |
seminal vesicle | 2.06e-13 | 1 |
vesicular gland | 2.06e-13 | 1 |
seminal fluid secreting gland | 2.06e-13 | 1 |
placenta | 1.32e-07 | 2 |
chorion | 1.32e-07 | 2 |
allantois | 1.32e-07 | 2 |
colon | 1.76e-07 | 2 |
large intestine | 1.76e-07 | 2 |
male accessory sex gland | 2.35e-07 | 2 |
sex gland | 2.35e-07 | 2 |
male reproductive gland | 2.35e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.