FFCP PHASE1:Mm9::chr16:32487753..32487808,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=106407|HGNC=|MCL_coexpression_id=126|UniProt=Q8R000|association_with_transcript=156bp_to_ENSMUST00000042042,NM_145932,uc007yyx.1_5end|description=CAGE_peak_1_at_Osta_5end|id=chr16:32487753..32487808,-|ontology_enrichment_celltype=CL:0002563!6.27e-07!9;CL:0002251!6.27e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,7.11e-09,9;CL:0002251,7.11e-09,9;CL:0000239,3.44e-07,6;CL:0000677,3.44e-07,6;CL:0000584,3.44e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.60e-15!59;UBERON:0000160!4.67e-14!43;UBERON:0000344!1.06e-11!15;UBERON:0001242!3.74e-10!13;UBERON:0000060!3.74e-10!13;UBERON:0001262!3.74e-10!13;UBERON:0004786!3.74e-10!13;UBERON:0004923!1.31e-09!24;UBERON:0003350!6.27e-07!9;UBERON:0004808!6.27e-07!9;UBERON:0001277!6.27e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.14e-30,31;UBERON:0005409,2.32e-24,47;UBERON:0000344,2.31e-15,15;UBERON:0001242,2.97e-13,13;UBERON:0001262,2.97e-13,13;UBERON:0004786,2.97e-13,13;UBERON:0004923,5.57e-10,24;UBERON:0003350,7.11e-09,9;UBERON:0004808,7.11e-09,9;UBERON:0001277,7.11e-09,9;UBERON:0000485,8.58e-07,11|phase1_expression=0,442.50081688671,364.454390751018,235.014692185407,307.049082457111,48.0134717668005,63.3090256013875,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,20.0702164756525,0,0,340.303883281576,396.41923768407,483.503313784847,395.439512474031,278.81977509554,2153.15536586017,1196.63905610015,1017.07785237588,5.08024538767705,6.1506478758457,0,5.48818077527422,13.1325369833209,5.51257261908397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,24.8586623633201,0,0,0,0.14084341977668,0,0,0,0,0,0,79.928715803342,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0.251333182659351,254.363621798671,0,0,0,0.220841518460394,0,68.9649516507052,0,0,571.457432501619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,1.24275463521301,1.64168241986767,0.720248245844059,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0.536546802799238,0.350296027101508,1.31647879930784,3.447516745661,2.43206428637567,1.90059983652932,0.658650345873152,0.939444931322602,0,0,280.195127970261,213.940508430807,2.98603550749328,7.66381017139447,36.8560939381187,81.6818274724537,88.0617053625686,165.306069091814,437.51579474404,317.045487843721,148.287773192159,115.79266672795,143.688532206792,382.897068086698,248.342619306024,227.419334056487,0,0.913988100877831,3.38123207019241,4.2766778847516,4.26695471768777,4.83937157243198,5.24863258131335,41.6260617302478,24.6488002710958,60.8348018134477,0,0.166845105716094,0.589676985339609,0.449724224769707,0.202860121388503,0.241177159752417,1.01850340712568,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0,0.335012514883631,0,0,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.488660878060728,0.329940245945071,0,0,3.32555912661226,0,0,0,20.6742634534577,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,2.1183207086382,0,0,0,0,0,0,505.427770716161,0,0,0,0.185194527369712,0.565105371014073,0.546776910884101,0,0,0,0,0.954670618015114,0.632671987162271,1.01659733563424,7.23635783506068,1.04544148007234,11.1364907510551,1.21377911746339,1.07449492442937,0,124.300759386829,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0,0,0.25984164595559,0.716106782669926,0.39736270956253,0.120195449519969,0.295379054349154,0.302899349844443,0.457240839929999,0.201652370273681,0.292373642219257,0.577271049841977,0.233753804363138,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,1.94485373654635,1.25767897576789,1.47074806760011,4.4449345560323,8.24140228955577,7.70206103020357,5.30664144703975,5.83002389747551,4.71565853465191,7.58496210506047,6.33849008808206,6.60507892989553,10.0021675169445,5.44656331940821,3.8581844092741,5.76920261124629,6.91834924631667,7.20025430009372,6.03417740941747,5.48403236878838,5.81385666529314,5.36423468367385,6.93839784711747,4.024415403201,6.05060336307039,5.56796866768033,6.17256498823512,4.98267076121531,5.41774653065599,4.91077251803627,5.11291575913688,6.55882477335881,0,7.95367468714389,13.1071342969462,0.382576664137687,0,0|short_description=p1@Osta}} | ||
|EntrezGene=106407 | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=Q8R000 | |||
|association_with_transcript=156bp_to_ENSMUST00000042042,NM_145932,uc007yyx.1_5end | |||
|description=CAGE_peak_1_at_Osta_5end | |||
|id=chr16:32487753..32487808,- | |||
|ontology_enrichment_celltype=CL:0002563!6.27e-07!9;CL:0002251!6.27e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.11e-09,9;CL:0002251,7.11e-09,9;CL:0000239,3.44e-07,6;CL:0000677,3.44e-07,6;CL:0000584,3.44e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.60e-15!59;UBERON:0000160!4.67e-14!43;UBERON:0000344!1.06e-11!15;UBERON:0001242!3.74e-10!13;UBERON:0000060!3.74e-10!13;UBERON:0001262!3.74e-10!13;UBERON:0004786!3.74e-10!13;UBERON:0004923!1.31e-09!24;UBERON:0003350!6.27e-07!9;UBERON:0004808!6.27e-07!9;UBERON:0001277!6.27e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.14e-30,31;UBERON:0005409,2.32e-24,47;UBERON:0000344,2.31e-15,15;UBERON:0001242,2.97e-13,13;UBERON:0001262,2.97e-13,13;UBERON:0004786,2.97e-13,13;UBERON:0004923,5.57e-10,24;UBERON:0003350,7.11e-09,9;UBERON:0004808,7.11e-09,9;UBERON:0001277,7.11e-09,9;UBERON:0000485,8.58e-07,11 | |||
|phase1_expression=0,442.50081688671,364.454390751018,235.014692185407,307.049082457111,48.0134717668005,63.3090256013875,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,20.0702164756525,0,0,340.303883281576,396.41923768407,483.503313784847,395.439512474031,278.81977509554,2153.15536586017,1196.63905610015,1017.07785237588,5.08024538767705,6.1506478758457,0,5.48818077527422,13.1325369833209,5.51257261908397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,24.8586623633201,0,0,0,0.14084341977668,0,0,0,0,0,0,79.928715803342,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0.251333182659351,254.363621798671,0,0,0,0.220841518460394,0,68.9649516507052,0,0,571.457432501619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,1.24275463521301,1.64168241986767,0.720248245844059,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0.536546802799238,0.350296027101508,1.31647879930784,3.447516745661,2.43206428637567,1.90059983652932,0.658650345873152,0.939444931322602,0,0,280.195127970261,213.940508430807,2.98603550749328,7.66381017139447,36.8560939381187,81.6818274724537,88.0617053625686,165.306069091814,437.51579474404,317.045487843721,148.287773192159,115.79266672795,143.688532206792,382.897068086698,248.342619306024,227.419334056487,0,0.913988100877831,3.38123207019241,4.2766778847516,4.26695471768777,4.83937157243198,5.24863258131335,41.6260617302478,24.6488002710958,60.8348018134477,0,0.166845105716094,0.589676985339609,0.449724224769707,0.202860121388503,0.241177159752417,1.01850340712568,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0,0.335012514883631,0,0,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.488660878060728,0.329940245945071,0,0,3.32555912661226,0,0,0,20.6742634534577,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,2.1183207086382,0,0,0,0,0,0,505.427770716161,0,0,0,0.185194527369712,0.565105371014073,0.546776910884101,0,0,0,0,0.954670618015114,0.632671987162271,1.01659733563424,7.23635783506068,1.04544148007234,11.1364907510551,1.21377911746339,1.07449492442937,0,124.300759386829,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0,0,0.25984164595559,0.716106782669926,0.39736270956253,0.120195449519969,0.295379054349154,0.302899349844443,0.457240839929999,0.201652370273681,0.292373642219257,0.577271049841977,0.233753804363138,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,1.94485373654635,1.25767897576789,1.47074806760011,4.4449345560323,8.24140228955577,7.70206103020357,5.30664144703975,5.83002389747551,4.71565853465191,7.58496210506047,6.33849008808206,6.60507892989553,10.0021675169445,5.44656331940821,3.8581844092741,5.76920261124629,6.91834924631667,7.20025430009372,6.03417740941747,5.48403236878838,5.81385666529314,5.36423468367385,6.93839784711747,4.024415403201,6.05060336307039,5.56796866768033,6.17256498823512,4.98267076121531,5.41774653065599,4.91077251803627,5.11291575913688,6.55882477335881,0,7.95367468714389,13.1071342969462,0.382576664137687,0,0 | |||
|short_description=p1@Osta | |||
}} |
Revision as of 12:27, 13 September 2013
Short description: | p1@Osta |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Osta_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | 156bp_to_ENSMUST00000042042, NM_145932, uc007yyx.1_5end |
EntrezGene: | Osta |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.11e-09 | 9 |
epithelial cell of alimentary canal | 7.11e-09 | 9 |
brush border epithelial cell | 3.44e-07 | 6 |
gut absorptive cell | 3.44e-07 | 6 |
enterocyte | 3.44e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.14e-30 | 31 |
gastrointestinal system | 2.32e-24 | 47 |
mucosa | 2.31e-15 | 15 |
intestinal mucosa | 2.97e-13 | 13 |
wall of intestine | 2.97e-13 | 13 |
gastrointestinal system mucosa | 2.97e-13 | 13 |
organ component layer | 5.57e-10 | 24 |
epithelium of mucosa | 7.11e-09 | 9 |
gastrointestinal system epithelium | 7.11e-09 | 9 |
intestinal epithelium | 7.11e-09 | 9 |
simple columnar epithelium | 8.58e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.