FFCP PHASE1:Mm9::chr16:11656210..11656230,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:11656210..11656230,+|id=chr16:11656210..11656230,+|ontology_enrichment_celltype=CL:0000553!8.95e-11!6;CL:0000556!8.95e-11!6;CL:0000050!5.24e-07!9|ontology_enrichment_celltype_v019_2=CL:0000553,5.82e-27,6;CL:0000556,5.82e-27,6;CL:0000050,5.38e-18,9;CL:0000839,1.87e-12,13;CL:0000763,4.14e-10,16;CL:0002027,3.19e-09,3;CL:0002006,3.19e-09,3;CL:0002024,3.19e-09,3;CL:0002031,4.70e-09,25;CL:0000049,1.69e-08,19;CL:0000945,7.32e-08,1;CL:0000236,7.32e-08,1;CL:0000826,7.32e-08,1;CL:0000988,5.45e-07,32;CL:0002032,5.45e-07,32;CL:0000037,5.45e-07,32;CL:0000837,5.45e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.20e-13!48;UBERON:0002106!4.36e-10!6;UBERON:0004457!4.36e-10!6;UBERON:0000042!4.36e-10!6;UBERON:0004854!4.36e-10!6;UBERON:0009034!4.36e-10!6;UBERON:0002095!4.36e-10!6;UBERON:0004782!4.36e-10!6;UBERON:0003281!4.36e-10!6;UBERON:0009664!4.36e-10!6;UBERON:0002296!4.36e-10!6;UBERON:0005602!4.36e-10!6;UBERON:0001179!4.36e-10!6;UBERON:0006293!4.36e-10!6;UBERON:0002390!1.89e-09!45;UBERON:0003061!1.89e-09!45;UBERON:0002465!4.55e-08!3;UBERON:0003887!5.44e-08!10;UBERON:0002405!1.43e-07!70;UBERON:0003081!1.86e-07!88;UBERON:0004177!6.39e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002465,5.44e-19,3;UBERON:0002193,1.06e-17,48;UBERON:0002405,1.06e-17,48;UBERON:0002106,4.94e-17,6;UBERON:0004457,4.94e-17,6;UBERON:0000042,4.94e-17,6;UBERON:0004854,4.94e-17,6;UBERON:0009034,4.94e-17,6;UBERON:0002095,4.94e-17,6;UBERON:0004782,4.94e-17,6;UBERON:0003281,4.94e-17,6;UBERON:0009664,4.94e-17,6;UBERON:0002296,4.94e-17,6;UBERON:0005602,4.94e-17,6;UBERON:0001179,4.94e-17,6;UBERON:0006293,4.94e-17,6;UBERON:0001962,7.06e-13,2;UBERON:0001961,7.06e-13,2;UBERON:0001744,7.06e-13,2;UBERON:0002390,1.39e-10,45;UBERON:0003061,1.39e-10,45;UBERON:0003887,2.48e-10,10;UBERON:0002371,4.14e-10,16;UBERON:0004923,5.58e-09,24;UBERON:0002075,3.38e-08,19;UBERON:0000029,8.50e-08,1;UBERON:0001097,8.50e-08,1;UBERON:0003968,8.50e-08,1;UBERON:0001467,8.50e-08,1;UBERON:0001474,2.53e-07,22;UBERON:0004765,2.53e-07,22;UBERON:0001434,2.53e-07,22;UBERON:0003199,2.74e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,2.83465374345756,0,15.2999150198745,14.671244395814,12.7316895539409,0.0850432901510698,0,0,1.11994695955385,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.88578248471361,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,6.73238497482646,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.472905432318573,0,0,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,3.07567585436135,0,0.185194527369712,1.31857919903284,3.00727300986255,3.20289442489132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:11656210..11656230,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:11656210..11656230,+ | |||
|id=chr16:11656210..11656230,+ | |||
|ontology_enrichment_celltype=CL:0000553!8.95e-11!6;CL:0000556!8.95e-11!6;CL:0000050!5.24e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,5.82e-27,6;CL:0000556,5.82e-27,6;CL:0000050,5.38e-18,9;CL:0000839,1.87e-12,13;CL:0000763,4.14e-10,16;CL:0002027,3.19e-09,3;CL:0002006,3.19e-09,3;CL:0002024,3.19e-09,3;CL:0002031,4.70e-09,25;CL:0000049,1.69e-08,19;CL:0000945,7.32e-08,1;CL:0000236,7.32e-08,1;CL:0000826,7.32e-08,1;CL:0000988,5.45e-07,32;CL:0002032,5.45e-07,32;CL:0000037,5.45e-07,32;CL:0000837,5.45e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.20e-13!48;UBERON:0002106!4.36e-10!6;UBERON:0004457!4.36e-10!6;UBERON:0000042!4.36e-10!6;UBERON:0004854!4.36e-10!6;UBERON:0009034!4.36e-10!6;UBERON:0002095!4.36e-10!6;UBERON:0004782!4.36e-10!6;UBERON:0003281!4.36e-10!6;UBERON:0009664!4.36e-10!6;UBERON:0002296!4.36e-10!6;UBERON:0005602!4.36e-10!6;UBERON:0001179!4.36e-10!6;UBERON:0006293!4.36e-10!6;UBERON:0002390!1.89e-09!45;UBERON:0003061!1.89e-09!45;UBERON:0002465!4.55e-08!3;UBERON:0003887!5.44e-08!10;UBERON:0002405!1.43e-07!70;UBERON:0003081!1.86e-07!88;UBERON:0004177!6.39e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,5.44e-19,3;UBERON:0002193,1.06e-17,48;UBERON:0002405,1.06e-17,48;UBERON:0002106,4.94e-17,6;UBERON:0004457,4.94e-17,6;UBERON:0000042,4.94e-17,6;UBERON:0004854,4.94e-17,6;UBERON:0009034,4.94e-17,6;UBERON:0002095,4.94e-17,6;UBERON:0004782,4.94e-17,6;UBERON:0003281,4.94e-17,6;UBERON:0009664,4.94e-17,6;UBERON:0002296,4.94e-17,6;UBERON:0005602,4.94e-17,6;UBERON:0001179,4.94e-17,6;UBERON:0006293,4.94e-17,6;UBERON:0001962,7.06e-13,2;UBERON:0001961,7.06e-13,2;UBERON:0001744,7.06e-13,2;UBERON:0002390,1.39e-10,45;UBERON:0003061,1.39e-10,45;UBERON:0003887,2.48e-10,10;UBERON:0002371,4.14e-10,16;UBERON:0004923,5.58e-09,24;UBERON:0002075,3.38e-08,19;UBERON:0000029,8.50e-08,1;UBERON:0001097,8.50e-08,1;UBERON:0003968,8.50e-08,1;UBERON:0001467,8.50e-08,1;UBERON:0001474,2.53e-07,22;UBERON:0004765,2.53e-07,22;UBERON:0001434,2.53e-07,22;UBERON:0003199,2.74e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,2.83465374345756,0,15.2999150198745,14.671244395814,12.7316895539409,0.0850432901510698,0,0,1.11994695955385,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.88578248471361,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,6.73238497482646,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.472905432318573,0,0,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,3.07567585436135,0,0.185194527369712,1.31857919903284,3.00727300986255,3.20289442489132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:11656210..11656230,+ | |||
}} |
Revision as of 11:58, 13 September 2013
Short description: | p@chr16:11656210..11656230, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:11656210..11656230, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 5.82e-27 | 6 |
megakaryocyte | 5.82e-27 | 6 |
megakaryocyte-erythroid progenitor cell | 5.38e-18 | 9 |
myeloid lineage restricted progenitor cell | 1.87e-12 | 13 |
myeloid cell | 4.14e-10 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 3.19e-09 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.19e-09 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.19e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 4.70e-09 | 25 |
common myeloid progenitor | 1.69e-08 | 19 |
lymphocyte of B lineage | 7.32e-08 | 1 |
B cell | 7.32e-08 | 1 |
pro-B cell | 7.32e-08 | 1 |
hematopoietic cell | 5.45e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.45e-07 | 32 |
hematopoietic stem cell | 5.45e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.45e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 5.44e-19 | 3 |
hemolymphoid system | 1.06e-17 | 48 |
immune system | 1.06e-17 | 48 |
spleen | 4.94e-17 | 6 |
cavity lining | 4.94e-17 | 6 |
serous membrane | 4.94e-17 | 6 |
gastrointestinal system mesentery | 4.94e-17 | 6 |
stomach region | 4.94e-17 | 6 |
mesentery | 4.94e-17 | 6 |
gastrointestinal system serosa | 4.94e-17 | 6 |
mesentery of stomach | 4.94e-17 | 6 |
gut mesentery | 4.94e-17 | 6 |
dorsal mesentery | 4.94e-17 | 6 |
dorsal mesogastrium | 4.94e-17 | 6 |
peritoneal cavity | 4.94e-17 | 6 |
spleen primordium | 4.94e-17 | 6 |
gut-associated lymphoid tissue | 7.06e-13 | 2 |
mucosa-associated lymphoid tissue | 7.06e-13 | 2 |
lymphoid tissue | 7.06e-13 | 2 |
hematopoietic system | 1.39e-10 | 45 |
blood island | 1.39e-10 | 45 |
intraembryonic coelom | 2.48e-10 | 10 |
bone marrow | 4.14e-10 | 16 |
organ component layer | 5.58e-09 | 24 |
viscus | 3.38e-08 | 19 |
lymph node | 8.50e-08 | 1 |
axillary lymph node | 8.50e-08 | 1 |
peripheral lymph node | 8.50e-08 | 1 |
shoulder | 8.50e-08 | 1 |
bone element | 2.53e-07 | 22 |
skeletal element | 2.53e-07 | 22 |
skeletal system | 2.53e-07 | 22 |
egg chamber | 2.74e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.