FFCP PHASE1:Hg19::chr4:79472975..79472986,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=306|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=541|TSSclassifier=S|UniProt=D6RAZ8|association_with_transcript=0bp_to_ENST00000512373_5end|description=CAGE_peak_2_at_ANXA3_5end|id=chr4:79472975..79472986,+|ontology_enrichment_celltype=CL:0000066!1.67e-46!254;CL:0000076!3.50e-18!62;CL:0002076!6.64e-16!43;CL:0000077!3.73e-11!19;CL:0000223!2.46e-10!59;CL:0002368!1.23e-07!13;CL:0002251!2.22e-07!21;CL:0002321!3.50e-07!248;CL:0000213!3.62e-07!57;CL:0000215!3.62e-07!57;CL:0000220!5.53e-07!246|ontology_enrichment_celltype_v019=CL:0000077;1.32e-15;19!CL:0002076;3.87e-13;42!CL:0002368;8.55e-11;13!CL:0000076;3.75e-10;63!CL:0002159;4.41e-07;14!CL:0002251;7.42e-07;20|ontology_enrichment_celltype_v019_2=CL:0000066,2.18e-46,253;CL:0000076,1.57e-20,63;CL:0002076,3.49e-17,42;CL:0000077,1.48e-15,19;CL:0002368,7.21e-11,13;CL:0000223,8.59e-11,58;CL:0002159,3.55e-07,14;CL:0002251,5.16e-07,20;CL:0002321,8.11e-07,250|ontology_enrichment_development_v019=UBERON:0008947;1.31e-08;29|ontology_enrichment_disease=DOID:305!1.51e-18!106;DOID:0050687!1.78e-11!143;DOID:162!1.12e-07!235;DOID:299!1.59e-07!25;DOID:1749!2.70e-07!14;DOID:14566!6.68e-07!239|ontology_enrichment_disease_v019=DOID:1749;2.43e-07;14|ontology_enrichment_disease_v019_2=DOID:305,3.64e-17,106;DOID:0050687,6.94e-11,143;DOID:162,8.77e-10,235;DOID:14566,3.44e-09,239;DOID:1749,2.21e-07,14|ontology_enrichment_uberon=UBERON:0004119!6.03e-14!169;UBERON:0000925!6.03e-14!169;UBERON:0006595!6.03e-14!169;UBERON:0001004!3.47e-11!72;UBERON:0001007!2.44e-10!155;UBERON:0001555!2.44e-10!155;UBERON:0007026!2.44e-10!155;UBERON:0000065!3.32e-09!53;UBERON:0000077!4.68e-09!130;UBERON:0008947!1.11e-08!38;UBERON:0003258!1.11e-08!38;UBERON:0004921!1.65e-08!129;UBERON:0004185!1.65e-08!129;UBERON:0005911!2.04e-08!82;UBERON:0005153!1.53e-07!37;UBERON:0005157!7.61e-07!51;UBERON:0001737!8.85e-07!9|ontology_enrichment_uberon_v019=UBERON:0000065;5.11e-12;44!UBERON:0001737;3.13e-10;9!UBERON:0001557;3.13e-10;9!UBERON:0000072;1.02e-08;37!UBERON:0001004;3.51e-08;65|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.02e-15,160;UBERON:0000925,1.02e-15,160;UBERON:0006595,1.02e-15,160;UBERON:0008947,2.56e-13,38;UBERON:0003258,2.56e-13,38;UBERON:0001004,7.51e-13,74;UBERON:0000065,1.74e-12,54;UBERON:0001007,7.49e-11,145;UBERON:0001555,7.49e-11,145;UBERON:0007026,7.49e-11,145;UBERON:0001737,2.76e-10,9;UBERON:0005911,5.94e-09,82;UBERON:0005631,6.64e-09,14;UBERON:0000158,6.64e-09,14;UBERON:0004921,1.77e-08,118;UBERON:0005153,2.41e-08,37;UBERON:0001048,2.50e-08,160;UBERON:0000072,1.83e-07,47;UBERON:0001041,4.93e-07,87;UBERON:0005157,8.14e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,4.42321085702716,2.09340350391728,2.62129646556207,3.69273769519835,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0,1.37544130346312,1.80621296789881,1.25937250101887,0,0,0.154816123316076,17.4690032650996,1.50602959389125,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.575384784644301,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0,0,0,0.659702600373432,0,0.426224750532694,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53435074212236,0,0,0,0,0,0.378139268656271,1.33037638477538,0.702678285545008,0.523916301990851,0,1.85392221392215,0,0,0,0,0,0,0.993812036833525,0,2.08284300964557,1.69592382577203,2.51699661725944,1.6507082516404,0.835979866147242,1.29208379584664,0.71153252537342,0.66944122552934,1.20848795132744,0.760272105718513,0.488124115096339,2.20597848207521,0,0.535798369704479,0.22452937262617,0,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0.436094052142534,0,0,1.19168262731897,0.860509862246441,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0.567160915800105,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,13.1417380151042,10.6370987030426,13.7666205786722,0.609868530647977,0.132529768321485,0.232387885739037,0.725627385107593,0.756962552626885,0.36497735907583,0,0,0,0,0,3.785817601275,3.87744787179634,4.09718750801919,4.30146493656336,3.4860711054785,5.45722423955522,2.15730093056263,1.76599318612811,3.07797725557112,0,0,0,0,0,0,0,0,5.53447973444011,0.857839051492628,9.76777540136768,7.86812272803337,21.9153159857355,1.20364978706088,0,0,1.44331342025273,0,1.6437217193015,0.144366447761074,0.462985512576611,0.761016608938393,0.790204397959275,1.71697232418975,0,0,0,15.9347517777521,20.4938196402609,22.6840155587818,8.14982556595919,10.7534557250166,3.4504441124869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,4.22015127883421,4.35766729300147,8.09781228574662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,1.498014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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=306 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=541 | |||
|TSSclassifier=S | |||
|UniProt=D6RAZ8 | |||
|association_with_transcript=0bp_to_ENST00000512373_5end | |||
|description=CAGE_peak_2_at_ANXA3_5end | |||
|id=chr4:79472975..79472986,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.67e-46!254;CL:0000076!3.50e-18!62;CL:0002076!6.64e-16!43;CL:0000077!3.73e-11!19;CL:0000223!2.46e-10!59;CL:0002368!1.23e-07!13;CL:0002251!2.22e-07!21;CL:0002321!3.50e-07!248;CL:0000213!3.62e-07!57;CL:0000215!3.62e-07!57;CL:0000220!5.53e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.32e-15;19!CL:0002076;3.87e-13;42!CL:0002368;8.55e-11;13!CL:0000076;3.75e-10;63!CL:0002159;4.41e-07;14!CL:0002251;7.42e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.18e-46,253;CL:0000076,1.57e-20,63;CL:0002076,3.49e-17,42;CL:0000077,1.48e-15,19;CL:0002368,7.21e-11,13;CL:0000223,8.59e-11,58;CL:0002159,3.55e-07,14;CL:0002251,5.16e-07,20;CL:0002321,8.11e-07,250 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.31e-08;29 | |||
|ontology_enrichment_disease=DOID:305!1.51e-18!106;DOID:0050687!1.78e-11!143;DOID:162!1.12e-07!235;DOID:299!1.59e-07!25;DOID:1749!2.70e-07!14;DOID:14566!6.68e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.43e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.64e-17,106;DOID:0050687,6.94e-11,143;DOID:162,8.77e-10,235;DOID:14566,3.44e-09,239;DOID:1749,2.21e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.03e-14!169;UBERON:0000925!6.03e-14!169;UBERON:0006595!6.03e-14!169;UBERON:0001004!3.47e-11!72;UBERON:0001007!2.44e-10!155;UBERON:0001555!2.44e-10!155;UBERON:0007026!2.44e-10!155;UBERON:0000065!3.32e-09!53;UBERON:0000077!4.68e-09!130;UBERON:0008947!1.11e-08!38;UBERON:0003258!1.11e-08!38;UBERON:0004921!1.65e-08!129;UBERON:0004185!1.65e-08!129;UBERON:0005911!2.04e-08!82;UBERON:0005153!1.53e-07!37;UBERON:0005157!7.61e-07!51;UBERON:0001737!8.85e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;5.11e-12;44!UBERON:0001737;3.13e-10;9!UBERON:0001557;3.13e-10;9!UBERON:0000072;1.02e-08;37!UBERON:0001004;3.51e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.02e-15,160;UBERON:0000925,1.02e-15,160;UBERON:0006595,1.02e-15,160;UBERON:0008947,2.56e-13,38;UBERON:0003258,2.56e-13,38;UBERON:0001004,7.51e-13,74;UBERON:0000065,1.74e-12,54;UBERON:0001007,7.49e-11,145;UBERON:0001555,7.49e-11,145;UBERON:0007026,7.49e-11,145;UBERON:0001737,2.76e-10,9;UBERON:0005911,5.94e-09,82;UBERON:0005631,6.64e-09,14;UBERON:0000158,6.64e-09,14;UBERON:0004921,1.77e-08,118;UBERON:0005153,2.41e-08,37;UBERON:0001048,2.50e-08,160;UBERON:0000072,1.83e-07,47;UBERON:0001041,4.93e-07,87;UBERON:0005157,8.14e-07,47 | |||
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| |||
|short_description=p2@ANXA3 | |||
}} |
Revision as of 11:52, 13 September 2013
Short description: | p2@ANXA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ANXA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000512373_5end |
EntrezGene: | ANXA3 |
HGNC: | 541 |
UniProt: | D6RAZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.18e-46 | 253 |
squamous epithelial cell | 1.57e-20 | 63 |
endo-epithelial cell | 3.49e-17 | 42 |
mesothelial cell | 1.48e-15 | 19 |
respiratory epithelial cell | 7.21e-11 | 13 |
endodermal cell | 8.59e-11 | 58 |
general ecto-epithelial cell | 3.55e-07 | 14 |
epithelial cell of alimentary canal | 5.16e-07 | 20 |
embryonic cell | 8.11e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.02e-15 | 160 |
endoderm | 1.02e-15 | 160 |
presumptive endoderm | 1.02e-15 | 160 |
respiratory primordium | 2.56e-13 | 38 |
endoderm of foregut | 2.56e-13 | 38 |
respiratory system | 7.51e-13 | 74 |
respiratory tract | 1.74e-12 | 54 |
digestive system | 7.49e-11 | 145 |
digestive tract | 7.49e-11 | 145 |
primitive gut | 7.49e-11 | 145 |
larynx | 2.76e-10 | 9 |
endo-epithelium | 5.94e-09 | 82 |
extraembryonic membrane | 6.64e-09 | 14 |
membranous layer | 6.64e-09 | 14 |
subdivision of digestive tract | 1.77e-08 | 118 |
epithelial bud | 2.41e-08 | 37 |
primordium | 2.50e-08 | 160 |
segment of respiratory tract | 1.83e-07 | 47 |
foregut | 4.93e-07 | 87 |
epithelial fold | 8.14e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.64e-17 | 106 |
cell type cancer | 6.94e-11 | 143 |
cancer | 8.77e-10 | 235 |
disease of cellular proliferation | 3.44e-09 | 239 |
squamous cell carcinoma | 2.21e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.