FFCP PHASE1:Mm9::chr15:89004361..89004407,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=140570|HGNC=|MCL_coexpression_id=423|UniProt=B2RXS4|association_with_transcript=-81bp_to_ENSMUST00000060808,NM_001159521,uc011zxs.1_5end|description=CAGE_peak_3_at_Plxnb2_5end|id=chr15:89004361..89004407,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.13e-14!59;UBERON:0000160!2.14e-14!43;UBERON:0004119!5.17e-13!130;UBERON:0000925!5.17e-13!130;UBERON:0006595!5.17e-13!130;UBERON:0001007!2.20e-12!128;UBERON:0001555!2.20e-12!128;UBERON:0007026!2.20e-12!128;UBERON:0004921!1.48e-11!126;UBERON:0004185!1.48e-11!126;UBERON:0002365!5.82e-10!25;UBERON:0002330!5.82e-10!25;UBERON:0005177!8.84e-10!85;UBERON:0009854!9.70e-09!23;UBERON:0009856!9.70e-09!23;UBERON:0000466!1.98e-08!79;UBERON:0002107!2.37e-08!22;UBERON:0007499!2.37e-08!22;UBERON:0006925!2.37e-08!22;UBERON:0009497!2.37e-08!22;UBERON:0000015!2.37e-08!22;UBERON:0002423!2.37e-08!22;UBERON:0006235!2.37e-08!22;UBERON:0008835!2.37e-08!22;UBERON:0003894!2.37e-08!22;UBERON:0004161!2.37e-08!22;UBERON:0008836!2.37e-08!22;UBERON:0004923!1.15e-07!24;UBERON:0002100!1.19e-07!98;UBERON:0009569!2.62e-07!66;UBERON:0005172!2.88e-07!49;UBERON:0005173!2.88e-07!49;UBERON:0002417!2.88e-07!49;UBERON:0000916!2.88e-07!49;UBERON:0000344!9.97e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.43e-11,31;UBERON:0005409,4.75e-11,47;UBERON:0005177,1.66e-10,79;UBERON:0002365,4.40e-10,25;UBERON:0002330,4.40e-10,25;UBERON:0004119,1.38e-09,118;UBERON:0000925,1.38e-09,118;UBERON:0006595,1.38e-09,118;UBERON:0002100,2.94e-09,90;UBERON:0001007,4.84e-09,116;UBERON:0001555,4.84e-09,116;UBERON:0007026,4.84e-09,116;UBERON:0009854,7.62e-09,23;UBERON:0009856,7.62e-09,23;UBERON:0002107,1.89e-08,22;UBERON:0007499,1.89e-08,22;UBERON:0006925,1.89e-08,22;UBERON:0009497,1.89e-08,22;UBERON:0000015,1.89e-08,22;UBERON:0002423,1.89e-08,22;UBERON:0006235,1.89e-08,22;UBERON:0008835,1.89e-08,22;UBERON:0003894,1.89e-08,22;UBERON:0004161,1.89e-08,22;UBERON:0008836,1.89e-08,22;UBERON:0004921,2.49e-08,114;UBERON:0004923,9.39e-08,24;UBERON:0005172,3.09e-07,49;UBERON:0005173,3.09e-07,49;UBERON:0002417,3.09e-07,49;UBERON:0000916,3.09e-07,49;UBERON:0009569,3.48e-07,66;UBERON:0000344,8.38e-07,15|phase1_expression=0.160148847104794,13.6100408979351,16.3799726180233,15.4256747766483,10.5188103288733,6.37941233265181,5.13947809310157,0,0.281577444303333,0,0.513653904676515,0.638177271962691,0,0,2.6648780945253,1.41732687172878,4.19737126876888,0.946386496074713,1.50825876966313,0,2.8064285749853,0,0,9.11956809922418,9.40578052375397,10.3361753540704,7.75371593086335,7.32602191132023,13.4916627814025,7.30887376303799,7.09537634096975,0.635030673459631,2.46025915033828,0,2.3108129580102,3.32469290716985,2.6542016314108,0,0,0,0,0,0,2.26614272356039,4.25783111121961,2.20256102594018,7.04152209913235,1.96222640742402,5.27246838562732,2.52758868796568,2.51975558925653,1.43752564364972,0.335565212115473,0,0,1.02903774414379,2.0057340795713,2.57836046138721,1.01158230429799,0.528990979272033,1.90149421051854,1.35537812827653,2.66788438833342,25.1971920838792,16.8107281636386,22.7353636782752,11.3848041996994,6.14749288514487,0.207379224616955,0.810035629990144,0.841299845405528,1.99955689082663,1.54607978666129,0.979926393719632,0.766763768145891,0,1.10115880999389,0.510749352340751,1.53606533256243,2.2420668914133,2.01272815925301,1.04182674111352,1.95428099300967,2.8138130501584,2.44477196442896,1.47314292736834,3.27454865837937,1.67759501242771,0.075726193333184,0.0755715601067855,9.56552812715537,6.88339101585109,1.3599426674155,11.3337670243942,12.3457519315057,8.96053774194671,5.47733238513832,0.170430322578058,0.519572009205738,0,0.704217098883403,0,0,0,4.11332977921307,4.30711771307668,5.05524445014783,5.02409070763864,6.99132285847364,4.00793775475027,2.60227990149204,1.82679286987285,1.15307748628029,2.11011696773672,2.58695155698551,1.63366568728578,52.899723095156,0.722996784599558,0.884610551949874,3.39710384889559,1.10420759230197,0.969750506270444,7.45567044872489,4.39171195517321,2.51336048176146,8.17462576667492,0.359445373517761,0,0.508280908292259,1.64769703345305,2.28750301409313,1.63350657746724,1.39059456153821,1.27857728665165,2.28566849015516,2.10913641988085,3.7680564624617,1.8661045591514,3.79084137650512,9.6803253707778,1.30120442962704,1.60931473103431,1.0803727788321,1.50704817835715,2.31324097114515,1.40925092313335,1.68663104207512,2.58703370739016,1.07783996466421,0.567318240503458,1.40760899331159,2.19195732427575,1.11218899690239,1.39300866608867,1.4404749548556,0,0,0.257347907114715,0,1.86413195281952,1.64168241986767,2.88099298337624,3.55117103377815,1.96764231747404,1.23413690309903,2.09280550275367,1.87791380979733,2.10177616260905,1.48103864922132,2.13417703302824,2.10778904819225,2.04679982395465,4.39100230582101,5.09984391289413,1.05144974282064,1.74937841044784,15.5296828002385,7.66906643324278,1.70630600428187,1.62565670302307,3.99489130098489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| ||
|EntrezGene=140570 | |||
|HGNC= | |||
|MCL_coexpression_id=423 | |||
|UniProt=B2RXS4 | |||
|association_with_transcript=-81bp_to_ENSMUST00000060808,NM_001159521,uc011zxs.1_5end | |||
|description=CAGE_peak_3_at_Plxnb2_5end | |||
|id=chr15:89004361..89004407,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.13e-14!59;UBERON:0000160!2.14e-14!43;UBERON:0004119!5.17e-13!130;UBERON:0000925!5.17e-13!130;UBERON:0006595!5.17e-13!130;UBERON:0001007!2.20e-12!128;UBERON:0001555!2.20e-12!128;UBERON:0007026!2.20e-12!128;UBERON:0004921!1.48e-11!126;UBERON:0004185!1.48e-11!126;UBERON:0002365!5.82e-10!25;UBERON:0002330!5.82e-10!25;UBERON:0005177!8.84e-10!85;UBERON:0009854!9.70e-09!23;UBERON:0009856!9.70e-09!23;UBERON:0000466!1.98e-08!79;UBERON:0002107!2.37e-08!22;UBERON:0007499!2.37e-08!22;UBERON:0006925!2.37e-08!22;UBERON:0009497!2.37e-08!22;UBERON:0000015!2.37e-08!22;UBERON:0002423!2.37e-08!22;UBERON:0006235!2.37e-08!22;UBERON:0008835!2.37e-08!22;UBERON:0003894!2.37e-08!22;UBERON:0004161!2.37e-08!22;UBERON:0008836!2.37e-08!22;UBERON:0004923!1.15e-07!24;UBERON:0002100!1.19e-07!98;UBERON:0009569!2.62e-07!66;UBERON:0005172!2.88e-07!49;UBERON:0005173!2.88e-07!49;UBERON:0002417!2.88e-07!49;UBERON:0000916!2.88e-07!49;UBERON:0000344!9.97e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.43e-11,31;UBERON:0005409,4.75e-11,47;UBERON:0005177,1.66e-10,79;UBERON:0002365,4.40e-10,25;UBERON:0002330,4.40e-10,25;UBERON:0004119,1.38e-09,118;UBERON:0000925,1.38e-09,118;UBERON:0006595,1.38e-09,118;UBERON:0002100,2.94e-09,90;UBERON:0001007,4.84e-09,116;UBERON:0001555,4.84e-09,116;UBERON:0007026,4.84e-09,116;UBERON:0009854,7.62e-09,23;UBERON:0009856,7.62e-09,23;UBERON:0002107,1.89e-08,22;UBERON:0007499,1.89e-08,22;UBERON:0006925,1.89e-08,22;UBERON:0009497,1.89e-08,22;UBERON:0000015,1.89e-08,22;UBERON:0002423,1.89e-08,22;UBERON:0006235,1.89e-08,22;UBERON:0008835,1.89e-08,22;UBERON:0003894,1.89e-08,22;UBERON:0004161,1.89e-08,22;UBERON:0008836,1.89e-08,22;UBERON:0004921,2.49e-08,114;UBERON:0004923,9.39e-08,24;UBERON:0005172,3.09e-07,49;UBERON:0005173,3.09e-07,49;UBERON:0002417,3.09e-07,49;UBERON:0000916,3.09e-07,49;UBERON:0009569,3.48e-07,66;UBERON:0000344,8.38e-07,15 | |||
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| |||
|short_description=p3@Plxnb2 | |||
}} |
Revision as of 11:32, 13 September 2013
Short description: | p3@Plxnb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Plxnb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:423 |
Association with transcript: | -81bp_to_ENSMUST00000060808, NM_001159521, uc011zxs.1_5end |
EntrezGene: | Plxnb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.43e-11 | 31 |
gastrointestinal system | 4.75e-11 | 47 |
trunk region element | 1.66e-10 | 79 |
exocrine gland | 4.40e-10 | 25 |
exocrine system | 4.40e-10 | 25 |
endoderm-derived structure | 1.38e-09 | 118 |
endoderm | 1.38e-09 | 118 |
presumptive endoderm | 1.38e-09 | 118 |
trunk | 2.94e-09 | 90 |
digestive system | 4.84e-09 | 116 |
digestive tract | 4.84e-09 | 116 |
primitive gut | 4.84e-09 | 116 |
digestive tract diverticulum | 7.62e-09 | 23 |
sac | 7.62e-09 | 23 |
liver | 1.89e-08 | 22 |
epithelial sac | 1.89e-08 | 22 |
digestive gland | 1.89e-08 | 22 |
epithelium of foregut-midgut junction | 1.89e-08 | 22 |
anatomical boundary | 1.89e-08 | 22 |
hepatobiliary system | 1.89e-08 | 22 |
foregut-midgut junction | 1.89e-08 | 22 |
hepatic diverticulum | 1.89e-08 | 22 |
liver primordium | 1.89e-08 | 22 |
septum transversum | 1.89e-08 | 22 |
liver bud | 1.89e-08 | 22 |
subdivision of digestive tract | 2.49e-08 | 114 |
organ component layer | 9.39e-08 | 24 |
abdomen element | 3.09e-07 | 49 |
abdominal segment element | 3.09e-07 | 49 |
abdominal segment of trunk | 3.09e-07 | 49 |
abdomen | 3.09e-07 | 49 |
subdivision of trunk | 3.48e-07 | 66 |
mucosa | 8.38e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.