FFCP PHASE1:Mm9::chr15:8864095..8864115,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=81|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:8864095..8864115,+|id=chr15:8864095..8864115,+|ontology_enrichment_celltype=CL:0000063!2.13e-18!66;CL:0000144!3.30e-13!121;CL:0000012!3.30e-13!121;CL:0000988!3.43e-12!32;CL:0002032!3.43e-12!32;CL:0000037!3.43e-12!32;CL:0000566!3.43e-12!32;CL:0000837!3.43e-12!32;CL:0002371!4.81e-12!118;CL:0000548!2.30e-11!115;CL:0000004!2.30e-11!115;CL:0000255!2.30e-11!115;CL:0002031!4.55e-10!25;CL:0002320!7.65e-10!46;CL:0000134!7.65e-10!46;CL:0000219!1.71e-08!54;CL:0000542!2.41e-08!13;CL:0000051!2.41e-08!13;CL:0002076!2.58e-08!15;CL:0000034!3.20e-08!97;CL:0000838!6.31e-08!12;CL:0000738!7.83e-08!17;CL:0002087!7.83e-08!17;CL:0000066!3.38e-07!25;CL:0000084!3.39e-07!11;CL:0000827!3.39e-07!11;CL:0000791!5.22e-07!9;CL:0000789!5.22e-07!9;CL:0002420!5.22e-07!9;CL:0002419!5.22e-07!9;CL:0000790!5.22e-07!9|ontology_enrichment_celltype_v019_2=CL:0002031,3.36e-21,25;CL:0000988,1.12e-19,32;CL:0002032,1.12e-19,32;CL:0000037,1.12e-19,32;CL:0000837,1.12e-19,32;CL:0002320,1.21e-15,46;CL:0000134,1.21e-15,46;CL:0000838,3.81e-15,12;CL:0000738,4.23e-15,17;CL:0002087,4.23e-15,17;CL:0000542,8.09e-14,13;CL:0000051,8.09e-14,13;CL:0002076,9.76e-14,15;CL:0000791,2.48e-13,9;CL:0000789,2.48e-13,9;CL:0002420,2.48e-13,9;CL:0002419,2.48e-13,9;CL:0000790,2.48e-13,9;CL:0000084,2.85e-13,11;CL:0000827,2.85e-13,11;CL:0000219,1.56e-12,54;CL:0000066,1.79e-12,25;CL:0000223,6.76e-12,20;CL:0000239,1.11e-11,6;CL:0000677,1.11e-11,6;CL:0000584,1.11e-11,6;CL:0000624,1.27e-11,8;CL:0000553,5.96e-10,6;CL:0000556,5.96e-10,6;CL:0002563,6.49e-10,9;CL:0002251,6.49e-10,9;CL:0000075,6.59e-10,7;CL:0000893,3.05e-08,6;CL:0002489,3.05e-08,6;CL:0000898,3.05e-08,6;CL:0000809,3.05e-08,6;CL:0000810,3.05e-08,6;CL:0000895,3.05e-08,6;CL:0000808,3.05e-08,6;CL:0000894,3.05e-08,6;CL:0000806,3.05e-08,6;CL:0000807,3.05e-08,6;CL:0000805,3.05e-08,6;CL:0002425,3.05e-08,6;CL:0002436,3.05e-08,6;CL:0002427,3.05e-08,6;CL:0002428,3.05e-08,6;CL:0002429,3.05e-08,6;CL:0002433,3.05e-08,6;CL:0002431,3.05e-08,6;CL:0002432,3.05e-08,6;CL:0000049,5.16e-08,19;CL:0000839,5.34e-08,13;CL:0000763,5.90e-08,16;CL:0000723,1.04e-07,91;CL:0000048,1.04e-07,91;CL:0000034,1.20e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!7.65e-10!46;UBERON:0000344!2.77e-08!15;UBERON:0000485!2.21e-07!11;UBERON:0001242!5.56e-07!13;UBERON:0000060!5.56e-07!13;UBERON:0001262!5.56e-07!13;UBERON:0004786!5.56e-07!13;UBERON:0004923!9.98e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.21e-15,46;UBERON:0000344,1.18e-13,15;UBERON:0001242,1.72e-10,13;UBERON:0001262,1.72e-10,13;UBERON:0004786,1.72e-10,13;UBERON:0003350,6.49e-10,9;UBERON:0004808,6.49e-10,9;UBERON:0001277,6.49e-10,9;UBERON:0002193,4.10e-09,48;UBERON:0002405,4.10e-09,48;UBERON:0002371,5.90e-08,16;UBERON:0000485,6.37e-08,11;UBERON:0004923,1.11e-07,24;UBERON:0002390,1.69e-07,45;UBERON:0003061,1.69e-07,45|phase1_expression=0.960893082628764,1.39590163055744,1.36499771816861,6.95667686005709,7.01254021924886,1.17515490338323,1.86890112476421,3.48632973292256,2.25261955442667,2.34064526321993,1.36974374580404,0.638177271962691,4.62241970814255,2.09808965805594,0.333109761815663,13.1608923803387,9.09430441566591,5.52058789376916,5.21034847701807,4.66828616977833,0.0850432901510698,0.0992909512008853,1.30599894569468,3.67982572424835,2.2940928106717,2.8711598205751,1.29228598847722,0,1.33016393619462,1.26015064879965,0,0.635030673459631,0,0,0.866554859253824,0.332469290716985,1.22501613757421,2.92972141515835,0,3.14114246384279,2.94115744015507,3.41522742479223,4.36959317728038,0,0.202753862439029,0.183546752161682,0,0,0.219686182734472,0,0,0,4.69791296961662,2.17608642603403,2.68875039313971,0.257259436035947,0,0,0.404632921719196,0,0,0,0,0,0.988866362566974,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0,0,0.530083353332288,0.755715601067855,4.92769630792852,5.16254326188832,0,0,0,0,0,0.170430322578058,0.519572009205738,0.70667914902068,0.563373679106722,2.56652954828636,10.1922095882658,0,0.649473123033642,1.01343946190039,1.01104889002957,0,0,0,0,0,0.230615497256059,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0.479260498023681,1.79970819298022,0.762421362438388,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.497627882440372,0,0,0,0,0,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0.702213187313235,2.05878325691772,0,0.207125772535502,0,0,0,0,0,0.465067889500816,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0.205809224758569,0.660837565967596,0,0.639864751605702,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.38992817423824,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0.370191491765402,0,0,0.196558995113203,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,4.52373851817817,4.89515115436839,0,0,0,0,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0.488660878060728,0,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0.32977250588296,0,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0.370850604021019,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0.509935289981566,0.559805809294632,0.690999869022119,0,0,0,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0.299033092087958,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0.443971906748129,0.897138566094757,1.34307693091263,0.19318959403219,0,0,0,0,0,0.460325236507177,0,2.23409137046794,0,0,0,0.900642406448441,0,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr15:8864095..8864115,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=81 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:8864095..8864115,+ | |||
|id=chr15:8864095..8864115,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.13e-18!66;CL:0000144!3.30e-13!121;CL:0000012!3.30e-13!121;CL:0000988!3.43e-12!32;CL:0002032!3.43e-12!32;CL:0000037!3.43e-12!32;CL:0000566!3.43e-12!32;CL:0000837!3.43e-12!32;CL:0002371!4.81e-12!118;CL:0000548!2.30e-11!115;CL:0000004!2.30e-11!115;CL:0000255!2.30e-11!115;CL:0002031!4.55e-10!25;CL:0002320!7.65e-10!46;CL:0000134!7.65e-10!46;CL:0000219!1.71e-08!54;CL:0000542!2.41e-08!13;CL:0000051!2.41e-08!13;CL:0002076!2.58e-08!15;CL:0000034!3.20e-08!97;CL:0000838!6.31e-08!12;CL:0000738!7.83e-08!17;CL:0002087!7.83e-08!17;CL:0000066!3.38e-07!25;CL:0000084!3.39e-07!11;CL:0000827!3.39e-07!11;CL:0000791!5.22e-07!9;CL:0000789!5.22e-07!9;CL:0002420!5.22e-07!9;CL:0002419!5.22e-07!9;CL:0000790!5.22e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,3.36e-21,25;CL:0000988,1.12e-19,32;CL:0002032,1.12e-19,32;CL:0000037,1.12e-19,32;CL:0000837,1.12e-19,32;CL:0002320,1.21e-15,46;CL:0000134,1.21e-15,46;CL:0000838,3.81e-15,12;CL:0000738,4.23e-15,17;CL:0002087,4.23e-15,17;CL:0000542,8.09e-14,13;CL:0000051,8.09e-14,13;CL:0002076,9.76e-14,15;CL:0000791,2.48e-13,9;CL:0000789,2.48e-13,9;CL:0002420,2.48e-13,9;CL:0002419,2.48e-13,9;CL:0000790,2.48e-13,9;CL:0000084,2.85e-13,11;CL:0000827,2.85e-13,11;CL:0000219,1.56e-12,54;CL:0000066,1.79e-12,25;CL:0000223,6.76e-12,20;CL:0000239,1.11e-11,6;CL:0000677,1.11e-11,6;CL:0000584,1.11e-11,6;CL:0000624,1.27e-11,8;CL:0000553,5.96e-10,6;CL:0000556,5.96e-10,6;CL:0002563,6.49e-10,9;CL:0002251,6.49e-10,9;CL:0000075,6.59e-10,7;CL:0000893,3.05e-08,6;CL:0002489,3.05e-08,6;CL:0000898,3.05e-08,6;CL:0000809,3.05e-08,6;CL:0000810,3.05e-08,6;CL:0000895,3.05e-08,6;CL:0000808,3.05e-08,6;CL:0000894,3.05e-08,6;CL:0000806,3.05e-08,6;CL:0000807,3.05e-08,6;CL:0000805,3.05e-08,6;CL:0002425,3.05e-08,6;CL:0002436,3.05e-08,6;CL:0002427,3.05e-08,6;CL:0002428,3.05e-08,6;CL:0002429,3.05e-08,6;CL:0002433,3.05e-08,6;CL:0002431,3.05e-08,6;CL:0002432,3.05e-08,6;CL:0000049,5.16e-08,19;CL:0000839,5.34e-08,13;CL:0000763,5.90e-08,16;CL:0000723,1.04e-07,91;CL:0000048,1.04e-07,91;CL:0000034,1.20e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.65e-10!46;UBERON:0000344!2.77e-08!15;UBERON:0000485!2.21e-07!11;UBERON:0001242!5.56e-07!13;UBERON:0000060!5.56e-07!13;UBERON:0001262!5.56e-07!13;UBERON:0004786!5.56e-07!13;UBERON:0004923!9.98e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.21e-15,46;UBERON:0000344,1.18e-13,15;UBERON:0001242,1.72e-10,13;UBERON:0001262,1.72e-10,13;UBERON:0004786,1.72e-10,13;UBERON:0003350,6.49e-10,9;UBERON:0004808,6.49e-10,9;UBERON:0001277,6.49e-10,9;UBERON:0002193,4.10e-09,48;UBERON:0002405,4.10e-09,48;UBERON:0002371,5.90e-08,16;UBERON:0000485,6.37e-08,11;UBERON:0004923,1.11e-07,24;UBERON:0002390,1.69e-07,45;UBERON:0003061,1.69e-07,45 | |||
|phase1_expression=0.960893082628764,1.39590163055744,1.36499771816861,6.95667686005709,7.01254021924886,1.17515490338323,1.86890112476421,3.48632973292256,2.25261955442667,2.34064526321993,1.36974374580404,0.638177271962691,4.62241970814255,2.09808965805594,0.333109761815663,13.1608923803387,9.09430441566591,5.52058789376916,5.21034847701807,4.66828616977833,0.0850432901510698,0.0992909512008853,1.30599894569468,3.67982572424835,2.2940928106717,2.8711598205751,1.29228598847722,0,1.33016393619462,1.26015064879965,0,0.635030673459631,0,0,0.866554859253824,0.332469290716985,1.22501613757421,2.92972141515835,0,3.14114246384279,2.94115744015507,3.41522742479223,4.36959317728038,0,0.202753862439029,0.183546752161682,0,0,0.219686182734472,0,0,0,4.69791296961662,2.17608642603403,2.68875039313971,0.257259436035947,0,0,0.404632921719196,0,0,0,0,0,0.988866362566974,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0,0,0.530083353332288,0.755715601067855,4.92769630792852,5.16254326188832,0,0,0,0,0,0.170430322578058,0.519572009205738,0.70667914902068,0.563373679106722,2.56652954828636,10.1922095882658,0,0.649473123033642,1.01343946190039,1.01104889002957,0,0,0,0,0,0.230615497256059,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0.479260498023681,1.79970819298022,0.762421362438388,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.497627882440372,0,0,0,0,0,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0.702213187313235,2.05878325691772,0,0.207125772535502,0,0,0,0,0,0.465067889500816,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0.205809224758569,0.660837565967596,0,0.639864751605702,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.38992817423824,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0.370191491765402,0,0,0.196558995113203,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,4.52373851817817,4.89515115436839,0,0,0,0,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0.488660878060728,0,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0.32977250588296,0,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0.370850604021019,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0.509935289981566,0.559805809294632,0.690999869022119,0,0,0,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0.299033092087958,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0.443971906748129,0.897138566094757,1.34307693091263,0.19318959403219,0,0,0,0,0,0.460325236507177,0,2.23409137046794,0,0,0,0.900642406448441,0,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr15:8864095..8864115,+ | |||
}} |
Revision as of 11:31, 13 September 2013
Short description: | p@chr15:8864095..8864115, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:8864095..8864115, + |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.21e-15 | 46 |
mucosa | 1.18e-13 | 15 |
intestinal mucosa | 1.72e-10 | 13 |
wall of intestine | 1.72e-10 | 13 |
gastrointestinal system mucosa | 1.72e-10 | 13 |
epithelium of mucosa | 6.49e-10 | 9 |
gastrointestinal system epithelium | 6.49e-10 | 9 |
intestinal epithelium | 6.49e-10 | 9 |
hemolymphoid system | 4.10e-09 | 48 |
immune system | 4.10e-09 | 48 |
bone marrow | 5.90e-08 | 16 |
simple columnar epithelium | 6.37e-08 | 11 |
organ component layer | 1.11e-07 | 24 |
hematopoietic system | 1.69e-07 | 45 |
blood island | 1.69e-07 | 45 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.