FFCP PHASE1:Mm9::chr15:85577309..85577329,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:85577309..85577329,+|id=chr15:85577309..85577329,+|ontology_enrichment_celltype=CL:0002563!1.48e-10!9;CL:0002251!1.48e-10!9;CL:0000239!5.93e-10!6;CL:0000677!5.93e-10!6;CL:0000212!5.93e-10!6;CL:0000584!5.93e-10!6;CL:0000066!1.94e-09!25;CL:0000075!2.31e-08!7;CL:0000223!1.79e-07!20|ontology_enrichment_celltype_v019_2=CL:0000239,9.19e-14,6;CL:0000677,9.19e-14,6;CL:0000584,9.19e-14,6;CL:0000066,1.64e-13,25;CL:0002563,1.39e-12,9;CL:0002251,1.39e-12,9;CL:0000075,9.40e-12,7;CL:0000682,7.77e-10,3;CL:0000223,2.91e-09,20;CL:0002076,2.74e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.71e-20!43;UBERON:0000344!2.82e-18!15;UBERON:0005409!6.44e-16!59;UBERON:0001242!3.22e-15!13;UBERON:0000060!3.22e-15!13;UBERON:0001262!3.22e-15!13;UBERON:0004786!3.22e-15!13;UBERON:0001007!3.55e-11!128;UBERON:0001555!3.55e-11!128;UBERON:0007026!3.55e-11!128;UBERON:0004119!8.00e-11!130;UBERON:0000925!8.00e-11!130;UBERON:0006595!8.00e-11!130;UBERON:0003350!1.48e-10!9;UBERON:0004808!1.48e-10!9;UBERON:0001277!1.48e-10!9;UBERON:0004923!7.02e-10!24;UBERON:0004921!1.09e-09!126;UBERON:0004185!1.09e-09!126;UBERON:0000485!2.70e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.40e-20,31;UBERON:0000344,2.01e-16,15;UBERON:0003350,1.39e-12,9;UBERON:0004808,1.39e-12,9;UBERON:0001277,1.39e-12,9;UBERON:0005409,4.39e-12,47;UBERON:0001242,1.94e-11,13;UBERON:0001262,1.94e-11,13;UBERON:0004786,1.94e-11,13;UBERON:0000485,3.53e-10,11;UBERON:0004923,1.15e-09,24;UBERON:0001007,7.61e-09,116;UBERON:0001555,7.61e-09,116;UBERON:0007026,7.61e-09,116;UBERON:0004119,1.28e-08,118;UBERON:0000925,1.28e-08,118;UBERON:0006595,1.28e-08,118;UBERON:0001962,5.93e-08,2;UBERON:0001961,5.93e-08,2;UBERON:0001744,5.93e-08,2;UBERON:0004921,6.04e-07,114|phase1_expression=0,2.44282785347553,4.09499315450582,6.35174843744343,7.01254021924886,1.84667199103079,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67963629408352,6.42345986988076,1.72269589234506,4.30761996159075,1.29282739611533,0.570070258369122,0.756090389279792,1.99557459589774,0,0,0,0.288851619751275,1.49611180822643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,2.15881276655127,0,2.68816132258401,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,1.0108910337347,1.47309299120532,0,0,0,0,0.204109497453984,0.2562274405697,0.655912071918102,6.46758426847539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,8.19796756656987,0,0,0.902072229254653,1.00841762311671,1.77902435075896,1.33157938278791,0.949058123089023,0.823494773620054,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,1.29682829924817,1.99141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0,1.48226313543574,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,1.5601883655728,1.01031551178845,0.358794827043824,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0.347652977834566,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p@chr15:85577309..85577329,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:85577309..85577329,+ | |||
|id=chr15:85577309..85577329,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.48e-10!9;CL:0002251!1.48e-10!9;CL:0000239!5.93e-10!6;CL:0000677!5.93e-10!6;CL:0000212!5.93e-10!6;CL:0000584!5.93e-10!6;CL:0000066!1.94e-09!25;CL:0000075!2.31e-08!7;CL:0000223!1.79e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.19e-14,6;CL:0000677,9.19e-14,6;CL:0000584,9.19e-14,6;CL:0000066,1.64e-13,25;CL:0002563,1.39e-12,9;CL:0002251,1.39e-12,9;CL:0000075,9.40e-12,7;CL:0000682,7.77e-10,3;CL:0000223,2.91e-09,20;CL:0002076,2.74e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.71e-20!43;UBERON:0000344!2.82e-18!15;UBERON:0005409!6.44e-16!59;UBERON:0001242!3.22e-15!13;UBERON:0000060!3.22e-15!13;UBERON:0001262!3.22e-15!13;UBERON:0004786!3.22e-15!13;UBERON:0001007!3.55e-11!128;UBERON:0001555!3.55e-11!128;UBERON:0007026!3.55e-11!128;UBERON:0004119!8.00e-11!130;UBERON:0000925!8.00e-11!130;UBERON:0006595!8.00e-11!130;UBERON:0003350!1.48e-10!9;UBERON:0004808!1.48e-10!9;UBERON:0001277!1.48e-10!9;UBERON:0004923!7.02e-10!24;UBERON:0004921!1.09e-09!126;UBERON:0004185!1.09e-09!126;UBERON:0000485!2.70e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.40e-20,31;UBERON:0000344,2.01e-16,15;UBERON:0003350,1.39e-12,9;UBERON:0004808,1.39e-12,9;UBERON:0001277,1.39e-12,9;UBERON:0005409,4.39e-12,47;UBERON:0001242,1.94e-11,13;UBERON:0001262,1.94e-11,13;UBERON:0004786,1.94e-11,13;UBERON:0000485,3.53e-10,11;UBERON:0004923,1.15e-09,24;UBERON:0001007,7.61e-09,116;UBERON:0001555,7.61e-09,116;UBERON:0007026,7.61e-09,116;UBERON:0004119,1.28e-08,118;UBERON:0000925,1.28e-08,118;UBERON:0006595,1.28e-08,118;UBERON:0001962,5.93e-08,2;UBERON:0001961,5.93e-08,2;UBERON:0001744,5.93e-08,2;UBERON:0004921,6.04e-07,114 | |||
|phase1_expression=0,2.44282785347553,4.09499315450582,6.35174843744343,7.01254021924886,1.84667199103079,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67963629408352,6.42345986988076,1.72269589234506,4.30761996159075,1.29282739611533,0.570070258369122,0.756090389279792,1.99557459589774,0,0,0,0.288851619751275,1.49611180822643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,2.15881276655127,0,2.68816132258401,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,1.0108910337347,1.47309299120532,0,0,0,0,0.204109497453984,0.2562274405697,0.655912071918102,6.46758426847539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,8.19796756656987,0,0,0.902072229254653,1.00841762311671,1.77902435075896,1.33157938278791,0.949058123089023,0.823494773620054,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,1.29682829924817,1.99141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0,1.48226313543574,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,1.5601883655728,1.01031551178845,0.358794827043824,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0.347652977834566,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr15:85577309..85577329,+ | |||
}} |
Revision as of 11:29, 13 September 2013
Short description: | p@chr15:85577309..85577329, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:85577309..85577329, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.19e-14 | 6 |
gut absorptive cell | 9.19e-14 | 6 |
enterocyte | 9.19e-14 | 6 |
epithelial cell | 1.64e-13 | 25 |
intestinal epithelial cell | 1.39e-12 | 9 |
epithelial cell of alimentary canal | 1.39e-12 | 9 |
columnar/cuboidal epithelial cell | 9.40e-12 | 7 |
M cell of gut | 7.77e-10 | 3 |
endodermal cell | 2.91e-09 | 20 |
endo-epithelial cell | 2.74e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.40e-20 | 31 |
mucosa | 2.01e-16 | 15 |
epithelium of mucosa | 1.39e-12 | 9 |
gastrointestinal system epithelium | 1.39e-12 | 9 |
intestinal epithelium | 1.39e-12 | 9 |
gastrointestinal system | 4.39e-12 | 47 |
intestinal mucosa | 1.94e-11 | 13 |
wall of intestine | 1.94e-11 | 13 |
gastrointestinal system mucosa | 1.94e-11 | 13 |
simple columnar epithelium | 3.53e-10 | 11 |
organ component layer | 1.15e-09 | 24 |
digestive system | 7.61e-09 | 116 |
digestive tract | 7.61e-09 | 116 |
primitive gut | 7.61e-09 | 116 |
endoderm-derived structure | 1.28e-08 | 118 |
endoderm | 1.28e-08 | 118 |
presumptive endoderm | 1.28e-08 | 118 |
gut-associated lymphoid tissue | 5.93e-08 | 2 |
mucosa-associated lymphoid tissue | 5.93e-08 | 2 |
lymphoid tissue | 5.93e-08 | 2 |
subdivision of digestive tract | 6.04e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.