FFCP PHASE1:Mm9::chr15:80552948..80552952,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=228|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:80552948..80552952,+|id=chr15:80552948..80552952,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.86e-12,29;UBERON:0005057,1.86e-12,29;UBERON:0002370,2.65e-12,23;UBERON:0000974,2.65e-12,23;UBERON:0004807,2.65e-12,23;UBERON:0005058,2.65e-12,23;UBERON:0003351,2.65e-12,23;UBERON:0009113,2.65e-12,23;UBERON:0003295,2.65e-12,23;UBERON:0009722,2.65e-12,23;UBERON:0005562,2.65e-12,23;UBERON:0007690,2.65e-12,23;UBERON:0006562,9.12e-12,24;UBERON:0003408,9.12e-12,24;UBERON:0001557,9.12e-12,24;UBERON:0001042,9.12e-12,24;UBERON:0008814,9.12e-12,24;UBERON:0009145,9.12e-12,24;UBERON:0000072,2.16e-10,27;UBERON:0000077,3.53e-10,35;UBERON:0007811,7.79e-10,36;UBERON:0000153,4.29e-08,43;UBERON:0002390,1.00e-07,45;UBERON:0003061,1.00e-07,45;UBERON:0002193,3.47e-07,48;UBERON:0002405,3.47e-07,48;UBERON:0003081,6.54e-07,87;UBERON:0000998,8.26e-07,1;UBERON:0007194,8.26e-07,1;UBERON:0006868,8.26e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0,0.42438965179803,0.0850432901510698,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0,0.608930956624282,0,0,0.587943535678524,0.125666591329675,0,0,0,0,1.32504911076236,0,0,0.585561594023094,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0.299581278809645,0.457500602818626,0,0.173824320192276,0,0,0.162241263067758,0.509196819251581,0.373220911830279,0.252722758433675,0.210441855886474,0.390361328888111,0,0.180062129805349,0.452114453507145,0.544291993210623,0.640568601424249,0.562210347358373,1.03481348295606,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,0,0,0,0,0.196764231747404,0.308534225774757,1.39520366850245,0,0.467061369468678,0.329119699826961,0.492502392237286,0.162137619091711,0,0.439100230582101,0.671032093801859,0,0.205809224758569,0,0.528901133327089,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.228497025219458,1.1270773567308,0.610953983535943,0.581857461502877,0.561086559122548,0.0632365371242573,0.295220295959204,0.627994911365499,0.246794327843601,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0.810676133875177,0,2.87536413054709,0,0,0,0.179397413521912,0,0.739012760666419,0,0.325929952884052,0,0.469380496577004,0.167506257441816,0.238043640886014,0.585400943573396,0.157635144106191,0.44292937929755,0.318909537314974,0.655453258862952,0.518054945597687,0.723245292907558,0,0,0.983528546038072,0.275936746304732,0.321101179975584,0,0,0.504941854408746,0,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0.425820255624806,0,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.129358683782755,0.214337035031592,0,0,0.658196082408484,0,0,0.42366414172764,0,0.32977250588296,0.968786560175433,0.0603129249281559,0.358117032009409,0.164140899745061,0,0.370850604021019,0.170870880797853,0.412773735926445,0.185194527369712,0.753473828018764,0.27338845544205,1.14389086603261,0.169978429993855,0,0,0.954670618015114,0,0.203319467126849,0.540026704109006,0.418176592028937,0.87345025498471,0.404593039154462,0.743881101528023,0,0.518459893167171,0,0,0,0,0.583353565032143,0.129159823477731,0.337912250981556,0.469428954583016,0.39061315453185,0.314578033277133,0.966336483304024,0.288030006257865,1.89606672376907,0,0.513554785824136,0.389762468933385,0.716106782669926,1.19208812868759,0.961563596159751,0.443068581523732,1.41353029927407,0.914481679859998,3.12561173924206,1.07203668813728,1.73181314952593,3.3894301632655,0.226730383615211,0,0,0,0.386379188064381,0,0.183151624267265,0,1.00314420807073,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0,0.243106717068294,0,0,0.222246727801615,0,0.64183841918363,0.252697211763798,0.760437899670719,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.231768651889711,0.192909220463705,0.412085900803307,0,1.37147700954166,0,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.73171189149109,0.263069711437843,0.407412341537585,0,0.237270036248348,0.0985044823755635,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0.382576664137687,0,0|short_description=p@chr15:80552948..80552952,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=228 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:80552948..80552952,+ | |||
|id=chr15:80552948..80552952,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.86e-12,29;UBERON:0005057,1.86e-12,29;UBERON:0002370,2.65e-12,23;UBERON:0000974,2.65e-12,23;UBERON:0004807,2.65e-12,23;UBERON:0005058,2.65e-12,23;UBERON:0003351,2.65e-12,23;UBERON:0009113,2.65e-12,23;UBERON:0003295,2.65e-12,23;UBERON:0009722,2.65e-12,23;UBERON:0005562,2.65e-12,23;UBERON:0007690,2.65e-12,23;UBERON:0006562,9.12e-12,24;UBERON:0003408,9.12e-12,24;UBERON:0001557,9.12e-12,24;UBERON:0001042,9.12e-12,24;UBERON:0008814,9.12e-12,24;UBERON:0009145,9.12e-12,24;UBERON:0000072,2.16e-10,27;UBERON:0000077,3.53e-10,35;UBERON:0007811,7.79e-10,36;UBERON:0000153,4.29e-08,43;UBERON:0002390,1.00e-07,45;UBERON:0003061,1.00e-07,45;UBERON:0002193,3.47e-07,48;UBERON:0002405,3.47e-07,48;UBERON:0003081,6.54e-07,87;UBERON:0000998,8.26e-07,1;UBERON:0007194,8.26e-07,1;UBERON:0006868,8.26e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0,0.42438965179803,0.0850432901510698,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0,0.608930956624282,0,0,0.587943535678524,0.125666591329675,0,0,0,0,1.32504911076236,0,0,0.585561594023094,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0.299581278809645,0.457500602818626,0,0.173824320192276,0,0,0.162241263067758,0.509196819251581,0.373220911830279,0.252722758433675,0.210441855886474,0.390361328888111,0,0.180062129805349,0.452114453507145,0.544291993210623,0.640568601424249,0.562210347358373,1.03481348295606,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,0,0,0,0,0.196764231747404,0.308534225774757,1.39520366850245,0,0.467061369468678,0.329119699826961,0.492502392237286,0.162137619091711,0,0.439100230582101,0.671032093801859,0,0.205809224758569,0,0.528901133327089,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.228497025219458,1.1270773567308,0.610953983535943,0.581857461502877,0.561086559122548,0.0632365371242573,0.295220295959204,0.627994911365499,0.246794327843601,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0.810676133875177,0,2.87536413054709,0,0,0,0.179397413521912,0,0.739012760666419,0,0.325929952884052,0,0.469380496577004,0.167506257441816,0.238043640886014,0.585400943573396,0.157635144106191,0.44292937929755,0.318909537314974,0.655453258862952,0.518054945597687,0.723245292907558,0,0,0.983528546038072,0.275936746304732,0.321101179975584,0,0,0.504941854408746,0,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0.425820255624806,0,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.129358683782755,0.214337035031592,0,0,0.658196082408484,0,0,0.42366414172764,0,0.32977250588296,0.968786560175433,0.0603129249281559,0.358117032009409,0.164140899745061,0,0.370850604021019,0.170870880797853,0.412773735926445,0.185194527369712,0.753473828018764,0.27338845544205,1.14389086603261,0.169978429993855,0,0,0.954670618015114,0,0.203319467126849,0.540026704109006,0.418176592028937,0.87345025498471,0.404593039154462,0.743881101528023,0,0.518459893167171,0,0,0,0,0.583353565032143,0.129159823477731,0.337912250981556,0.469428954583016,0.39061315453185,0.314578033277133,0.966336483304024,0.288030006257865,1.89606672376907,0,0.513554785824136,0.389762468933385,0.716106782669926,1.19208812868759,0.961563596159751,0.443068581523732,1.41353029927407,0.914481679859998,3.12561173924206,1.07203668813728,1.73181314952593,3.3894301632655,0.226730383615211,0,0,0,0.386379188064381,0,0.183151624267265,0,1.00314420807073,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0,0.243106717068294,0,0,0.222246727801615,0,0.64183841918363,0.252697211763798,0.760437899670719,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.231768651889711,0.192909220463705,0.412085900803307,0,1.37147700954166,0,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.73171189149109,0.263069711437843,0.407412341537585,0,0.237270036248348,0.0985044823755635,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0.382576664137687,0,0 | |||
|short_description=p@chr15:80552948..80552952,+ | |||
}} |
Revision as of 11:16, 13 September 2013
Short description: | p@chr15:80552948..80552952, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:80552948..80552952, + |
Coexpression cluster: | MCL_coexpression_mm9:228 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.86e-12 | 29 |
immune organ | 1.86e-12 | 29 |
thymus | 2.65e-12 | 23 |
neck | 2.65e-12 | 23 |
respiratory system epithelium | 2.65e-12 | 23 |
hemolymphoid system gland | 2.65e-12 | 23 |
pharyngeal epithelium | 2.65e-12 | 23 |
thymic region | 2.65e-12 | 23 |
pharyngeal gland | 2.65e-12 | 23 |
entire pharyngeal arch endoderm | 2.65e-12 | 23 |
thymus primordium | 2.65e-12 | 23 |
early pharyngeal endoderm | 2.65e-12 | 23 |
pharynx | 9.12e-12 | 24 |
gland of gut | 9.12e-12 | 24 |
upper respiratory tract | 9.12e-12 | 24 |
chordate pharynx | 9.12e-12 | 24 |
pharyngeal arch system | 9.12e-12 | 24 |
pharyngeal region of foregut | 9.12e-12 | 24 |
segment of respiratory tract | 2.16e-10 | 27 |
mixed endoderm/mesoderm-derived structure | 3.53e-10 | 35 |
craniocervical region | 7.79e-10 | 36 |
anterior region of body | 4.29e-08 | 43 |
hematopoietic system | 1.00e-07 | 45 |
blood island | 1.00e-07 | 45 |
hemolymphoid system | 3.47e-07 | 48 |
immune system | 3.47e-07 | 48 |
lateral plate mesoderm | 6.54e-07 | 87 |
seminal vesicle | 8.26e-07 | 1 |
vesicular gland | 8.26e-07 | 1 |
seminal fluid secreting gland | 8.26e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.