FFCP PHASE1:Mm9::chr15:79940875..79940915,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=888|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:79940875..79940915,+|id=chr15:79940875..79940915,+|ontology_enrichment_celltype=CL:0000117!4.32e-15!23;CL:0000337!4.32e-15!23;CL:0000540!8.80e-11!33;CL:0000047!8.80e-11!33;CL:0000031!8.80e-11!33;CL:0000404!8.80e-11!33;CL:0000393!4.01e-10!39;CL:0000211!4.01e-10!39;CL:0002319!1.70e-09!43;CL:0000221!4.11e-09!44;CL:0000133!4.11e-09!44;CL:0000055!7.73e-09!50|ontology_enrichment_celltype_v019_2=CL:0002610,5.66e-11,3;CL:0002092,3.37e-10,3;CL:0002540,3.37e-10,3;CL:0000117,7.32e-10,23;CL:0000337,7.32e-10,23;CL:0002194,1.16e-07,4;CL:0000766,1.16e-07,4;CL:0000234,1.16e-07,4;CL:0000576,1.16e-07,4;CL:0000235,1.16e-07,4;CL:0000864,1.16e-07,4;CL:0002009,1.16e-07,4;CL:0000040,1.16e-07,4;CL:0000559,1.16e-07,4;CL:0002476,1.69e-07,2;CL:0002611,5.42e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.02e-24!73;UBERON:0005743!4.02e-24!73;UBERON:0000073!4.73e-23!75;UBERON:0001016!4.73e-23!75;UBERON:0001049!8.78e-21!52;UBERON:0005068!8.78e-21!52;UBERON:0006241!8.78e-21!52;UBERON:0007135!8.78e-21!52;UBERON:0004121!1.01e-19!102;UBERON:0000924!1.01e-19!102;UBERON:0006601!1.01e-19!102;UBERON:0000955!1.94e-19!50;UBERON:0006238!1.94e-19!50;UBERON:0002020!2.02e-19!34;UBERON:0002616!1.31e-18!49;UBERON:0000033!5.16e-18!63;UBERON:0002346!1.41e-17!71;UBERON:0003075!1.41e-17!71;UBERON:0007284!1.41e-17!71;UBERON:0003056!1.07e-14!49;UBERON:0002791!1.20e-14!29;UBERON:0003528!1.20e-14!29;UBERON:0001893!1.20e-14!29;UBERON:0003080!5.21e-14!40;UBERON:0002780!1.71e-13!39;UBERON:0001890!1.71e-13!39;UBERON:0006240!1.71e-13!39;UBERON:0007811!2.85e-13!86;UBERON:0000956!4.65e-13!21;UBERON:0001869!4.65e-13!21;UBERON:0000203!4.65e-13!21;UBERON:0002021!6.28e-13!10;UBERON:0000411!6.28e-13!10;UBERON:0001950!6.28e-13!10;UBERON:0000153!5.13e-11!94;UBERON:0002619!2.51e-10!17;UBERON:0003076!1.03e-07!12;UBERON:0003057!1.03e-07!12;UBERON:0000025!2.96e-07!114;UBERON:0002240!5.85e-07!6;UBERON:0005174!5.85e-07!6;UBERON:0001137!5.85e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.08e-32,10;UBERON:0000411,1.08e-32,10;UBERON:0001950,1.08e-32,10;UBERON:0002020,1.11e-21,34;UBERON:0000073,1.41e-20,54;UBERON:0002619,1.79e-18,17;UBERON:0001017,8.73e-16,73;UBERON:0001016,2.98e-15,75;UBERON:0001049,8.42e-15,52;UBERON:0005068,8.42e-15,52;UBERON:0006241,8.42e-15,52;UBERON:0007135,8.42e-15,52;UBERON:0000956,1.34e-14,21;UBERON:0001869,1.34e-14,21;UBERON:0000203,1.34e-14,21;UBERON:0003528,1.58e-14,29;UBERON:0002791,1.58e-14,29;UBERON:0001893,1.58e-14,29;UBERON:0002780,6.00e-12,39;UBERON:0001890,6.00e-12,39;UBERON:0006240,6.00e-12,39;UBERON:0003080,1.39e-11,40;UBERON:0002346,2.25e-11,64;UBERON:0003075,2.25e-11,64;UBERON:0007284,2.25e-11,64;UBERON:0004121,3.74e-11,95;UBERON:0000924,3.74e-11,95;UBERON:0006601,3.74e-11,95;UBERON:0004684,5.66e-11,3;UBERON:0002275,5.66e-11,3;UBERON:0001948,5.38e-10,5;UBERON:0002315,5.38e-10,5;UBERON:0002616,9.80e-10,46;UBERON:0010371,1.52e-09,73;UBERON:0000955,1.79e-09,47;UBERON:0006238,1.79e-09,47;UBERON:0003056,5.56e-09,49;UBERON:0002240,2.39e-08,6;UBERON:0005174,2.39e-08,6;UBERON:0001137,2.39e-08,6;UBERON:0002256,5.42e-07,2;UBERON:0010314,7.24e-07,92|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0.0797721589953364,0,0,0,0.404950534779652,0.699561878128147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,0.202316460859598,0.528990979272033,0,0,0,1.7997994345628,3.9554654502679,2.8419204597844,1.19840044207362,0.768436610643109,0.103689612308478,0.810035629990144,0.210324961351382,1.71390590642282,1.76694832761291,0.244981598429908,0.191690942036473,0,6.60695285996332,3.83062014255563,5.06901559745603,0.131886287730194,0.640413505216868,0.52091337055676,3.62937898701795,0,1.83357897332172,2.65165726926301,1.42371680799103,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,1.01104889002957,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,0.149790639404823,0,0,0.869121600961382,1.27857728665165,1.0389402227978,0.486723789203273,0,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5712155545345,1.08781136763742,0,0,0.642202359951168,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0.642642632843614,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0.15241361331,0,0,0,0.116876902181569,0,0,0.179427713218951,0.335769232728157,0,0,0,0,0,4.51801474093653,5.9842280745933,6.30185064783336,3.95262319390481,4.11049511862385,2.2661816921691,7.42524750254986,6.30449684513909,4.07828168085784,4.65984280576638,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr15:79940875..79940915,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=888 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:79940875..79940915,+ | |||
|id=chr15:79940875..79940915,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.32e-15!23;CL:0000337!4.32e-15!23;CL:0000540!8.80e-11!33;CL:0000047!8.80e-11!33;CL:0000031!8.80e-11!33;CL:0000404!8.80e-11!33;CL:0000393!4.01e-10!39;CL:0000211!4.01e-10!39;CL:0002319!1.70e-09!43;CL:0000221!4.11e-09!44;CL:0000133!4.11e-09!44;CL:0000055!7.73e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.66e-11,3;CL:0002092,3.37e-10,3;CL:0002540,3.37e-10,3;CL:0000117,7.32e-10,23;CL:0000337,7.32e-10,23;CL:0002194,1.16e-07,4;CL:0000766,1.16e-07,4;CL:0000234,1.16e-07,4;CL:0000576,1.16e-07,4;CL:0000235,1.16e-07,4;CL:0000864,1.16e-07,4;CL:0002009,1.16e-07,4;CL:0000040,1.16e-07,4;CL:0000559,1.16e-07,4;CL:0002476,1.69e-07,2;CL:0002611,5.42e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.02e-24!73;UBERON:0005743!4.02e-24!73;UBERON:0000073!4.73e-23!75;UBERON:0001016!4.73e-23!75;UBERON:0001049!8.78e-21!52;UBERON:0005068!8.78e-21!52;UBERON:0006241!8.78e-21!52;UBERON:0007135!8.78e-21!52;UBERON:0004121!1.01e-19!102;UBERON:0000924!1.01e-19!102;UBERON:0006601!1.01e-19!102;UBERON:0000955!1.94e-19!50;UBERON:0006238!1.94e-19!50;UBERON:0002020!2.02e-19!34;UBERON:0002616!1.31e-18!49;UBERON:0000033!5.16e-18!63;UBERON:0002346!1.41e-17!71;UBERON:0003075!1.41e-17!71;UBERON:0007284!1.41e-17!71;UBERON:0003056!1.07e-14!49;UBERON:0002791!1.20e-14!29;UBERON:0003528!1.20e-14!29;UBERON:0001893!1.20e-14!29;UBERON:0003080!5.21e-14!40;UBERON:0002780!1.71e-13!39;UBERON:0001890!1.71e-13!39;UBERON:0006240!1.71e-13!39;UBERON:0007811!2.85e-13!86;UBERON:0000956!4.65e-13!21;UBERON:0001869!4.65e-13!21;UBERON:0000203!4.65e-13!21;UBERON:0002021!6.28e-13!10;UBERON:0000411!6.28e-13!10;UBERON:0001950!6.28e-13!10;UBERON:0000153!5.13e-11!94;UBERON:0002619!2.51e-10!17;UBERON:0003076!1.03e-07!12;UBERON:0003057!1.03e-07!12;UBERON:0000025!2.96e-07!114;UBERON:0002240!5.85e-07!6;UBERON:0005174!5.85e-07!6;UBERON:0001137!5.85e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.08e-32,10;UBERON:0000411,1.08e-32,10;UBERON:0001950,1.08e-32,10;UBERON:0002020,1.11e-21,34;UBERON:0000073,1.41e-20,54;UBERON:0002619,1.79e-18,17;UBERON:0001017,8.73e-16,73;UBERON:0001016,2.98e-15,75;UBERON:0001049,8.42e-15,52;UBERON:0005068,8.42e-15,52;UBERON:0006241,8.42e-15,52;UBERON:0007135,8.42e-15,52;UBERON:0000956,1.34e-14,21;UBERON:0001869,1.34e-14,21;UBERON:0000203,1.34e-14,21;UBERON:0003528,1.58e-14,29;UBERON:0002791,1.58e-14,29;UBERON:0001893,1.58e-14,29;UBERON:0002780,6.00e-12,39;UBERON:0001890,6.00e-12,39;UBERON:0006240,6.00e-12,39;UBERON:0003080,1.39e-11,40;UBERON:0002346,2.25e-11,64;UBERON:0003075,2.25e-11,64;UBERON:0007284,2.25e-11,64;UBERON:0004121,3.74e-11,95;UBERON:0000924,3.74e-11,95;UBERON:0006601,3.74e-11,95;UBERON:0004684,5.66e-11,3;UBERON:0002275,5.66e-11,3;UBERON:0001948,5.38e-10,5;UBERON:0002315,5.38e-10,5;UBERON:0002616,9.80e-10,46;UBERON:0010371,1.52e-09,73;UBERON:0000955,1.79e-09,47;UBERON:0006238,1.79e-09,47;UBERON:0003056,5.56e-09,49;UBERON:0002240,2.39e-08,6;UBERON:0005174,2.39e-08,6;UBERON:0001137,2.39e-08,6;UBERON:0002256,5.42e-07,2;UBERON:0010314,7.24e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0.0797721589953364,0,0,0,0.404950534779652,0.699561878128147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,0.202316460859598,0.528990979272033,0,0,0,1.7997994345628,3.9554654502679,2.8419204597844,1.19840044207362,0.768436610643109,0.103689612308478,0.810035629990144,0.210324961351382,1.71390590642282,1.76694832761291,0.244981598429908,0.191690942036473,0,6.60695285996332,3.83062014255563,5.06901559745603,0.131886287730194,0.640413505216868,0.52091337055676,3.62937898701795,0,1.83357897332172,2.65165726926301,1.42371680799103,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,1.01104889002957,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,0.149790639404823,0,0,0.869121600961382,1.27857728665165,1.0389402227978,0.486723789203273,0,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5712155545345,1.08781136763742,0,0,0.642202359951168,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0.642642632843614,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0.15241361331,0,0,0,0.116876902181569,0,0,0.179427713218951,0.335769232728157,0,0,0,0,0,4.51801474093653,5.9842280745933,6.30185064783336,3.95262319390481,4.11049511862385,2.2661816921691,7.42524750254986,6.30449684513909,4.07828168085784,4.65984280576638,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:79940875..79940915,+ | |||
}} |
Revision as of 11:13, 13 September 2013
Short description: | p@chr15:79940875..79940915, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:79940875..79940915, + |
Coexpression cluster: | MCL_coexpression_mm9:888 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.66e-11 | 3 |
bone marrow cell | 3.37e-10 | 3 |
mesenchymal stem cell of the bone marrow | 3.37e-10 | 3 |
CNS neuron (sensu Vertebrata) | 7.32e-10 | 23 |
neuroblast (sensu Vertebrata) | 7.32e-10 | 23 |
monopoietic cell | 1.16e-07 | 4 |
myeloid leukocyte | 1.16e-07 | 4 |
phagocyte | 1.16e-07 | 4 |
monocyte | 1.16e-07 | 4 |
macrophage | 1.16e-07 | 4 |
tissue-resident macrophage | 1.16e-07 | 4 |
macrophage dendritic cell progenitor | 1.16e-07 | 4 |
monoblast | 1.16e-07 | 4 |
promonocyte | 1.16e-07 | 4 |
bone marrow macrophage | 1.69e-07 | 2 |
neuron of the dorsal spinal cord | 5.42e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.