FFCP PHASE1:Mm9::chr15:78681809..78681834,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=410|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:78681809..78681834,-|id=chr15:78681809..78681834,-|ontology_enrichment_celltype=CL:0002563!5.12e-13!9;CL:0002251!5.12e-13!9;CL:0000239!5.20e-09!6;CL:0000677!5.20e-09!6;CL:0000212!5.20e-09!6;CL:0000584!5.20e-09!6;CL:0000075!1.49e-07!7;CL:0002076!7.47e-07!15|ontology_enrichment_celltype_v019_2=CL:0002563,6.82e-23,9;CL:0002251,6.82e-23,9;CL:0000239,2.00e-15,6;CL:0000677,2.00e-15,6;CL:0000584,2.00e-15,6;CL:0000066,2.59e-13,25;CL:0000075,3.97e-13,7;CL:0002076,4.63e-13,15;CL:0000223,2.23e-09,20;CL:0000682,3.52e-09,3;CL:0002250,4.80e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.68e-27!43;UBERON:0005409!7.94e-23!59;UBERON:0000344!4.22e-21!15;UBERON:0001242!2.56e-18!13;UBERON:0000060!2.56e-18!13;UBERON:0001262!2.56e-18!13;UBERON:0004786!2.56e-18!13;UBERON:0004923!4.34e-16!24;UBERON:0003350!5.12e-13!9;UBERON:0004808!5.12e-13!9;UBERON:0001277!5.12e-13!9;UBERON:0000485!3.36e-10!11;UBERON:0004119!6.80e-09!130;UBERON:0000925!6.80e-09!130;UBERON:0006595!6.80e-09!130;UBERON:0001007!5.86e-08!128;UBERON:0001555!5.86e-08!128;UBERON:0007026!5.86e-08!128;UBERON:0004921!8.22e-07!126;UBERON:0004185!8.22e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.85e-51,31;UBERON:0005409,4.78e-38,47;UBERON:0000344,5.14e-38,15;UBERON:0001242,8.36e-33,13;UBERON:0001262,8.36e-33,13;UBERON:0004786,8.36e-33,13;UBERON:0003350,6.82e-23,9;UBERON:0004808,6.82e-23,9;UBERON:0001277,6.82e-23,9;UBERON:0004923,1.88e-22,24;UBERON:0000485,2.01e-18,11;UBERON:0001007,1.23e-15,116;UBERON:0001555,1.23e-15,116;UBERON:0007026,1.23e-15,116;UBERON:0004119,2.90e-15,118;UBERON:0000925,2.90e-15,118;UBERON:0006595,2.90e-15,118;UBERON:0004921,2.73e-13,114;UBERON:0002108,1.75e-11,4;UBERON:0000331,2.43e-09,3;UBERON:0002116,2.43e-09,3;UBERON:0001204,2.43e-09,3;UBERON:0001168,2.43e-09,3|phase1_expression=0,5.23463111459042,7.73498706962211,2.72217790176147,2.00358291978539,15.6127722878058,15.1848216387092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,12.7993938234725,12.6175104586944,12.6331032105304,10.7690499039769,16.5912849168135,15.9619672343354,9.07308467135751,21.9513205548752,0,0,0,12.1317680295535,13.4650062740379,12.2501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,11.240110429178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,7.1401652999157,0,0.464473343720877,1.28867461322093,1.61346819698674,2.2237804384487,1.90225626112559,7.59246498471219,3.12928013975621,1.25667604400135,0.994782360205754,0.974820435595601,12.5834717211591,7.5648317456143,3.78368419183298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,21.0027535963325,0,0,0.432021363287205,0,0,0,0.495920734352016,5.49687478166462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.565879024158229,0.280924522409647,0.192075457214608,0.114870937911227,0,0,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0.701794825336225,0.429742108096597,0,0,0|short_description=p@chr15:78681809..78681834,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=410 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:78681809..78681834,- | |||
|id=chr15:78681809..78681834,- | |||
|ontology_enrichment_celltype=CL:0002563!5.12e-13!9;CL:0002251!5.12e-13!9;CL:0000239!5.20e-09!6;CL:0000677!5.20e-09!6;CL:0000212!5.20e-09!6;CL:0000584!5.20e-09!6;CL:0000075!1.49e-07!7;CL:0002076!7.47e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.82e-23,9;CL:0002251,6.82e-23,9;CL:0000239,2.00e-15,6;CL:0000677,2.00e-15,6;CL:0000584,2.00e-15,6;CL:0000066,2.59e-13,25;CL:0000075,3.97e-13,7;CL:0002076,4.63e-13,15;CL:0000223,2.23e-09,20;CL:0000682,3.52e-09,3;CL:0002250,4.80e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.68e-27!43;UBERON:0005409!7.94e-23!59;UBERON:0000344!4.22e-21!15;UBERON:0001242!2.56e-18!13;UBERON:0000060!2.56e-18!13;UBERON:0001262!2.56e-18!13;UBERON:0004786!2.56e-18!13;UBERON:0004923!4.34e-16!24;UBERON:0003350!5.12e-13!9;UBERON:0004808!5.12e-13!9;UBERON:0001277!5.12e-13!9;UBERON:0000485!3.36e-10!11;UBERON:0004119!6.80e-09!130;UBERON:0000925!6.80e-09!130;UBERON:0006595!6.80e-09!130;UBERON:0001007!5.86e-08!128;UBERON:0001555!5.86e-08!128;UBERON:0007026!5.86e-08!128;UBERON:0004921!8.22e-07!126;UBERON:0004185!8.22e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.85e-51,31;UBERON:0005409,4.78e-38,47;UBERON:0000344,5.14e-38,15;UBERON:0001242,8.36e-33,13;UBERON:0001262,8.36e-33,13;UBERON:0004786,8.36e-33,13;UBERON:0003350,6.82e-23,9;UBERON:0004808,6.82e-23,9;UBERON:0001277,6.82e-23,9;UBERON:0004923,1.88e-22,24;UBERON:0000485,2.01e-18,11;UBERON:0001007,1.23e-15,116;UBERON:0001555,1.23e-15,116;UBERON:0007026,1.23e-15,116;UBERON:0004119,2.90e-15,118;UBERON:0000925,2.90e-15,118;UBERON:0006595,2.90e-15,118;UBERON:0004921,2.73e-13,114;UBERON:0002108,1.75e-11,4;UBERON:0000331,2.43e-09,3;UBERON:0002116,2.43e-09,3;UBERON:0001204,2.43e-09,3;UBERON:0001168,2.43e-09,3 | |||
|phase1_expression=0,5.23463111459042,7.73498706962211,2.72217790176147,2.00358291978539,15.6127722878058,15.1848216387092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,12.7993938234725,12.6175104586944,12.6331032105304,10.7690499039769,16.5912849168135,15.9619672343354,9.07308467135751,21.9513205548752,0,0,0,12.1317680295535,13.4650062740379,12.2501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,11.240110429178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,7.1401652999157,0,0.464473343720877,1.28867461322093,1.61346819698674,2.2237804384487,1.90225626112559,7.59246498471219,3.12928013975621,1.25667604400135,0.994782360205754,0.974820435595601,12.5834717211591,7.5648317456143,3.78368419183298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,21.0027535963325,0,0,0.432021363287205,0,0,0,0.495920734352016,5.49687478166462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.565879024158229,0.280924522409647,0.192075457214608,0.114870937911227,0,0,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0.701794825336225,0.429742108096597,0,0,0 | |||
|short_description=p@chr15:78681809..78681834,- | |||
}} |
Revision as of 11:08, 13 September 2013
Short description: | p@chr15:78681809..78681834, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:78681809..78681834, - |
Coexpression cluster: | MCL_coexpression_mm9:410 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.82e-23 | 9 |
epithelial cell of alimentary canal | 6.82e-23 | 9 |
brush border epithelial cell | 2.00e-15 | 6 |
gut absorptive cell | 2.00e-15 | 6 |
enterocyte | 2.00e-15 | 6 |
epithelial cell | 2.59e-13 | 25 |
columnar/cuboidal epithelial cell | 3.97e-13 | 7 |
endo-epithelial cell | 4.63e-13 | 15 |
endodermal cell | 2.23e-09 | 20 |
M cell of gut | 3.52e-09 | 3 |
intestinal crypt stem cell | 4.80e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.85e-51 | 31 |
gastrointestinal system | 4.78e-38 | 47 |
mucosa | 5.14e-38 | 15 |
intestinal mucosa | 8.36e-33 | 13 |
wall of intestine | 8.36e-33 | 13 |
gastrointestinal system mucosa | 8.36e-33 | 13 |
epithelium of mucosa | 6.82e-23 | 9 |
gastrointestinal system epithelium | 6.82e-23 | 9 |
intestinal epithelium | 6.82e-23 | 9 |
organ component layer | 1.88e-22 | 24 |
simple columnar epithelium | 2.01e-18 | 11 |
digestive system | 1.23e-15 | 116 |
digestive tract | 1.23e-15 | 116 |
primitive gut | 1.23e-15 | 116 |
endoderm-derived structure | 2.90e-15 | 118 |
endoderm | 2.90e-15 | 118 |
presumptive endoderm | 2.90e-15 | 118 |
subdivision of digestive tract | 2.73e-13 | 114 |
small intestine | 1.75e-11 | 4 |
ileal mucosa | 2.43e-09 | 3 |
ileum | 2.43e-09 | 3 |
mucosa of small intestine | 2.43e-09 | 3 |
wall of small intestine | 2.43e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.