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FFCP PHASE1:Mm9::chr15:76447271..76447306,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=72027|HGNC=|MCL_coexpression_id=12|UniProt=Q78IQ7|association_with_transcript=0bp_to_NM_028064,uc007wlb.1_5end|description=CAGE_peak_1_at_Slc39a4_5end|id=chr15:76447271..76447306,-|ontology_enrichment_celltype=CL:0000066!3.46e-07!25;CL:0000223!7.10e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,3.79e-09,25;CL:0000223,1.16e-08,20;CL:0002563,5.37e-07,9;CL:0002251,5.37e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.03e-21!130;UBERON:0000925!1.03e-21!130;UBERON:0006595!1.03e-21!130;UBERON:0001007!6.64e-21!128;UBERON:0001555!6.64e-21!128;UBERON:0007026!6.64e-21!128;UBERON:0004921!1.09e-19!126;UBERON:0004185!1.09e-19!126;UBERON:0000160!5.27e-15!43;UBERON:0005409!1.61e-14!59;UBERON:0009854!2.99e-10!23;UBERON:0009856!2.99e-10!23;UBERON:0000344!4.46e-10!15;UBERON:0002107!1.02e-09!22;UBERON:0007499!1.02e-09!22;UBERON:0006925!1.02e-09!22;UBERON:0009497!1.02e-09!22;UBERON:0000015!1.02e-09!22;UBERON:0002423!1.02e-09!22;UBERON:0006235!1.02e-09!22;UBERON:0008835!1.02e-09!22;UBERON:0003894!1.02e-09!22;UBERON:0004161!1.02e-09!22;UBERON:0008836!1.02e-09!22;UBERON:0001242!6.77e-09!13;UBERON:0000060!6.77e-09!13;UBERON:0001262!6.77e-09!13;UBERON:0004786!6.77e-09!13;UBERON:0000466!1.32e-08!79;UBERON:0002365!1.91e-08!25;UBERON:0002330!1.91e-08!25;UBERON:0005911!2.00e-07!69;UBERON:0004923!2.62e-07!24;UBERON:0000077!4.86e-07!97;UBERON:0009569!5.52e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.04e-21,118;UBERON:0000925,6.04e-21,118;UBERON:0006595,6.04e-21,118;UBERON:0001007,4.43e-20,116;UBERON:0001555,4.43e-20,116;UBERON:0007026,4.43e-20,116;UBERON:0004921,9.03e-19,114;UBERON:0000160,9.28e-19,31;UBERON:0005409,1.25e-16,47;UBERON:0009854,9.35e-12,23;UBERON:0009856,9.35e-12,23;UBERON:0000344,1.50e-11,15;UBERON:0002107,3.96e-11,22;UBERON:0007499,3.96e-11,22;UBERON:0006925,3.96e-11,22;UBERON:0009497,3.96e-11,22;UBERON:0000015,3.96e-11,22;UBERON:0002423,3.96e-11,22;UBERON:0006235,3.96e-11,22;UBERON:0008835,3.96e-11,22;UBERON:0003894,3.96e-11,22;UBERON:0004161,3.96e-11,22;UBERON:0008836,3.96e-11,22;UBERON:0001242,3.63e-10,13;UBERON:0001262,3.63e-10,13;UBERON:0004786,3.63e-10,13;UBERON:0002365,1.86e-09,25;UBERON:0002330,1.86e-09,25;UBERON:0004923,4.76e-08,24;UBERON:0005911,2.77e-07,69;UBERON:0003350,5.37e-07,9;UBERON:0004808,5.37e-07,9;UBERON:0001277,5.37e-07,9|phase1_expression=0.160148847104794,328.734833996278,369.914381623693,357.210233553366,457.818697170961,63.1226062388706,62.6081876796009,1.03298658753261,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0.699561878128147,0,0,0.42438965179803,9.43980520676875,0,0.261199789138935,127.673953389139,137.645568640302,269.314791169944,152.489746640312,130.575567007649,464.417237151378,191.542898617547,166.297882991479,0,0,0,23.6858328196045,37.5690298510193,24.5003227514843,0.418531630736908,0,0.523523743973798,0.588231488031014,1.36609096991689,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,11.2487464660175,6.92206453796882,14.209602298922,2.69640099466564,10.373894243682,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0.837548997004143,0,0.15279824777681,0,0,0,0.151452386666368,0,24.3486170509409,74.8568772973806,106.755499392117,92.2892457700667,116.309978723133,81.0928665646177,21.2071074398945,0,0,0,0,0,0,0,86.8129074454969,81.5818766829817,82.9060089824245,38.2515997058851,0.776813650941515,0.29688427812965,1.56136794089522,0,2.30615497256059,0.753613202763113,2.11659672844269,1.75933227861546,128.046993286406,0.722996784599558,0.884610551949874,0.161766849947409,0,0,104.379386282148,0.292780797011547,0.209446706813455,158.638831284535,1.07833612055328,0,0.254140454146129,0.299581278809645,0,0,0,0.255715457330331,1.24672826735736,0,1.32391173005411,1.49288364732112,8.08712826987759,3.78795340595653,0.130120442962704,0,0,0.753524089178575,0.136072998302656,0,0.0937017245597288,1.03481348295606,0,0.378212160335639,0,0,0,0,0,0.796137067273973,0,0,0.284163499395593,0.828503090142008,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.584799949701329,0.658650345873152,0.402619256281115,0.841159794256509,0.411618449517138,377.007831384514,115.300447065305,0.213288250535234,1.39342003116263,6.05677068213839,14.722897297504,33.8014626644203,118.891016320349,167.034229663668,168.981127546835,101.790759564109,129.71961977083,147.587813949174,133.924091889479,140.922008518301,143.580858016399,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.280543279561274,0.316182685621286,0.295220295959204,0.784993639206874,0,71.4450831280029,2.50267658574141,5.70021085828289,8.09503604585473,12.5773275260872,21.4647672179651,41.24938798859,54.9499622531048,35.3454794369577,28.5543869715605,18.6898668485561,47.26190035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|EntrezGene=72027
|HGNC=
|MCL_coexpression_id=12
|UniProt=Q78IQ7
|association_with_transcript=0bp_to_NM_028064,uc007wlb.1_5end
|description=CAGE_peak_1_at_Slc39a4_5end
|id=chr15:76447271..76447306,-
|ontology_enrichment_celltype=CL:0000066!3.46e-07!25;CL:0000223!7.10e-07!20
|ontology_enrichment_celltype_v019_2=CL:0000066,3.79e-09,25;CL:0000223,1.16e-08,20;CL:0002563,5.37e-07,9;CL:0002251,5.37e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.03e-21!130;UBERON:0000925!1.03e-21!130;UBERON:0006595!1.03e-21!130;UBERON:0001007!6.64e-21!128;UBERON:0001555!6.64e-21!128;UBERON:0007026!6.64e-21!128;UBERON:0004921!1.09e-19!126;UBERON:0004185!1.09e-19!126;UBERON:0000160!5.27e-15!43;UBERON:0005409!1.61e-14!59;UBERON:0009854!2.99e-10!23;UBERON:0009856!2.99e-10!23;UBERON:0000344!4.46e-10!15;UBERON:0002107!1.02e-09!22;UBERON:0007499!1.02e-09!22;UBERON:0006925!1.02e-09!22;UBERON:0009497!1.02e-09!22;UBERON:0000015!1.02e-09!22;UBERON:0002423!1.02e-09!22;UBERON:0006235!1.02e-09!22;UBERON:0008835!1.02e-09!22;UBERON:0003894!1.02e-09!22;UBERON:0004161!1.02e-09!22;UBERON:0008836!1.02e-09!22;UBERON:0001242!6.77e-09!13;UBERON:0000060!6.77e-09!13;UBERON:0001262!6.77e-09!13;UBERON:0004786!6.77e-09!13;UBERON:0000466!1.32e-08!79;UBERON:0002365!1.91e-08!25;UBERON:0002330!1.91e-08!25;UBERON:0005911!2.00e-07!69;UBERON:0004923!2.62e-07!24;UBERON:0000077!4.86e-07!97;UBERON:0009569!5.52e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.04e-21,118;UBERON:0000925,6.04e-21,118;UBERON:0006595,6.04e-21,118;UBERON:0001007,4.43e-20,116;UBERON:0001555,4.43e-20,116;UBERON:0007026,4.43e-20,116;UBERON:0004921,9.03e-19,114;UBERON:0000160,9.28e-19,31;UBERON:0005409,1.25e-16,47;UBERON:0009854,9.35e-12,23;UBERON:0009856,9.35e-12,23;UBERON:0000344,1.50e-11,15;UBERON:0002107,3.96e-11,22;UBERON:0007499,3.96e-11,22;UBERON:0006925,3.96e-11,22;UBERON:0009497,3.96e-11,22;UBERON:0000015,3.96e-11,22;UBERON:0002423,3.96e-11,22;UBERON:0006235,3.96e-11,22;UBERON:0008835,3.96e-11,22;UBERON:0003894,3.96e-11,22;UBERON:0004161,3.96e-11,22;UBERON:0008836,3.96e-11,22;UBERON:0001242,3.63e-10,13;UBERON:0001262,3.63e-10,13;UBERON:0004786,3.63e-10,13;UBERON:0002365,1.86e-09,25;UBERON:0002330,1.86e-09,25;UBERON:0004923,4.76e-08,24;UBERON:0005911,2.77e-07,69;UBERON:0003350,5.37e-07,9;UBERON:0004808,5.37e-07,9;UBERON:0001277,5.37e-07,9
|phase1_expression=0.160148847104794,328.734833996278,369.914381623693,357.210233553366,457.818697170961,63.1226062388706,62.6081876796009,1.03298658753261,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0.699561878128147,0,0,0.42438965179803,9.43980520676875,0,0.261199789138935,127.673953389139,137.645568640302,269.314791169944,152.489746640312,130.575567007649,464.417237151378,191.542898617547,166.297882991479,0,0,0,23.6858328196045,37.5690298510193,24.5003227514843,0.418531630736908,0,0.523523743973798,0.588231488031014,1.36609096991689,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,11.2487464660175,6.92206453796882,14.209602298922,2.69640099466564,10.373894243682,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0.837548997004143,0,0.15279824777681,0,0,0,0.151452386666368,0,24.3486170509409,74.8568772973806,106.755499392117,92.2892457700667,116.309978723133,81.0928665646177,21.2071074398945,0,0,0,0,0,0,0,86.8129074454969,81.5818766829817,82.9060089824245,38.2515997058851,0.776813650941515,0.29688427812965,1.56136794089522,0,2.30615497256059,0.753613202763113,2.11659672844269,1.75933227861546,128.046993286406,0.722996784599558,0.884610551949874,0.161766849947409,0,0,104.379386282148,0.292780797011547,0.209446706813455,158.638831284535,1.07833612055328,0,0.254140454146129,0.299581278809645,0,0,0,0.255715457330331,1.24672826735736,0,1.32391173005411,1.49288364732112,8.08712826987759,3.78795340595653,0.130120442962704,0,0,0.753524089178575,0.136072998302656,0,0.0937017245597288,1.03481348295606,0,0.378212160335639,0,0,0,0,0,0.796137067273973,0,0,0.284163499395593,0.828503090142008,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.584799949701329,0.658650345873152,0.402619256281115,0.841159794256509,0.411618449517138,377.007831384514,115.300447065305,0.213288250535234,1.39342003116263,6.05677068213839,14.722897297504,33.8014626644203,118.891016320349,167.034229663668,168.981127546835,101.790759564109,129.71961977083,147.587813949174,133.924091889479,140.922008518301,143.580858016399,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.280543279561274,0.316182685621286,0.295220295959204,0.784993639206874,0,71.4450831280029,2.50267658574141,5.70021085828289,8.09503604585473,12.5773275260872,21.4647672179651,41.24938798859,54.9499622531048,35.3454794369577,28.5543869715605,18.6898668485561,47.2619003538999,72.3927401625781,67.691139289826,82.8816050471234,40.5252557945228,32.8860678496556,1.13694847062291,0.325929952884052,1.86719594352707,3.52035372432753,10.3853879613926,14.5206620940468,12.2934198150413,5.67486518782288,5.97954662051692,7.17546458958692,14.4199716949849,17.4411831684555,20.2508682014116,6.03165135757089,7.07077388964322,0,3.31124095565679,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,14.6198287764517,3.38324646967785,2.44330439030364,97.4973426767685,0,1.45668381692989,1.81394134178851,0.754420319023592,1.77181135728464,1.53717573971964,51.6856586336442,1.09060118843252,3.92147116223193,3.16036757935816,3.16255825724996,8.25084345985495,0.680879211507576,0.18006109403131,0,0.214337035031592,0.177340233642274,0.535106452806212,0.164549020602121,0,9.1521966144847,50.4160328655892,4.19003956304428,0.32977250588296,0,0.120625849856312,0.119372344003136,1.47726809770555,89.4846168453642,0,0,1.23832120777933,0.740778109478847,0.188368457004691,0,0.228778173206523,1.01987057996313,1.11961161858926,0.829199842826543,16.2294005062569,1.58167996790568,1.01659733563424,4.32021363287205,5.43629569637619,15.7221045897248,9.57536859332227,17.6878395252219,20.9404753587224,178.220588276215,0.621339313086926,0,0.598066184175915,0,2.13896307178452,1.16243841129958,0.506868376472335,0.234714477291508,1.5624526181274,0.104859344425711,0,0,1.58005560314089,0.202725215290164,0.513554785824136,0.389762468933385,0.179026695667481,0,0.240390899039938,0.886137163047463,0.100966449948148,0.228620419965,0.504130925684203,0.584747284438515,0.577271049841977,0.584384510907845,0.226730383615211,2.88581739386284,0.358855426437903,2.18250001273302,0.772758376128762,5.06742683718191,114.652916791308,4.07299920250225,1.50471631210609,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,3.40349403895612,2.09613162627982,3.30918315210025,9.11211583986622,9.47761263298913,11.2321723357135,10.3605856823157,8.11133759648767,8.11093267960128,9.92599979180754,11.1403765184473,10.6255617567885,11.4310485907938,9.73428337936786,9.45255180272155,7.00546031365621,8.68473628792944,8.57173130963539,11.5359274003569,10.0143199777875,8.1393993314104,9.97559432402504,10.2383675548929,11.5244622909847,7.89209134313529,9.50628796921032,16.2731258780744,10.5585166130515,9.35792582567853,9.41231399290286,10.8455788830176,7.33045121728337,0.249810577937946,10.5269223800434,13.1071342969462,0,1.32354851471709,0.695603506861264
|short_description=p1@Slc39a4
}}

Revision as of 10:59, 13 September 2013

Short description:p1@Slc39a4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slc39a4_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 0bp_to_NM_028064, uc007wlb.1_5end
EntrezGene:Slc39a4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slc39a4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5328.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6369.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I3357.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I4457.82
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I763.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I862.61
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1127.67
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2137.65
GP2+ M cell, pool1.CNhs13228.11845-124H9269.31
GP2+ M cell, pool2.CNhs13231.11846-124I1152.49
GP2+ M cell, pool3.CNhs13240.11847-124I2130.58
Ileum epithelium, pool1.CNhs13199.10252-104B9464.42
Ileum epithelium, pool2.CNhs13232.10253-104C1191.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8166.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.69
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F637.57
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F724.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.21
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G324.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F774.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C4106.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C892.29
Mouse hepatocyte, donor6.CNhs13090.11822-124F4116.31
Mouse hepatocyte, donor8.CNhs13091.11824-124F681.09
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A721.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G186.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G281.58
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G382.91
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B638.25
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A8128.05
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H4104.38
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H7158.64
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B28.09
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I3377.01
intestine, adult.CNhs10496.178-9A3115.30
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D86.06
intestine, embryo E16.CNhs10585.463-22H414.72
intestine, embryo E17.CNhs10582.482-18D333.80
intestine, embryo E18.CNhs10526.1289-20F7118.89
intestine, neonate N00.CNhs11126.644-26D1167.03
intestine, neonate N01.CNhs11192.1322-23E9168.98
intestine, neonate N06.CNhs11102.688-20B8101.79
intestine, neonate N07.CNhs11095.720-20F2129.72
intestine, neonate N10.CNhs11098.755-23A5147.59
intestine, neonate N20.CNhs11187.827-18D1133.92
intestine, neonate N25.CNhs11121.1352-25E3140.92
intestine, neonate N30.CNhs11131.1384-42G1143.58
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B271.45
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H65.70
liver, embryo E14.CNhs10594.409-16E18.10
liver, embryo E15.CNhs10520.433-16D712.58
liver, embryo E16.CNhs10523.462-17F521.46
liver, embryo E17.CNhs10510.481-18A341.25
liver, embryo E18.CNhs10579.499-43G454.95
liver, neonate N00.CNhs11117.641-24F435.35
liver, neonate N03.CNhs11123.1345-25G228.55
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H247.26
liver, neonate N10.CNhs11115.751-24B972.39
liver, neonate N20.CNhs11220.823-25A367.69
liver, neonate N25.CNhs11198.1368-26H182.88
liver, neonate N30.CNhs11106.1382-42D140.53
lung, adult.CNhs10474.28-22B132.89
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A610.39
lung, embryo E18.CNhs10583.1287-20I614.52
lung, neonate N00.CNhs11224.640-42C612.29
lung, neonate N06.CNhs11212.683-20E55.67
lung, neonate N07.CNhs11111.715-19A35.98
lung, neonate N10.CNhs11219.750-23E67.18
lung, neonate N20.CNhs11109.822-18A414.42
lung, neonate N25.CNhs11119.1359-25C717.44
lung, neonate N30.CNhs11133.1394-42H220.25
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.07
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I714.62
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G697.50
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G951.69
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I79.15
placenta, adult pregnant day17.CNhs10464.577-18G350.42
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I189.48
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D44.32
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C615.72
stomach, neonate N03.CNhs11193.1340-24B89.58
stomach, neonate N07.CNhs11210.718-18A917.69
stomach, neonate N25.CNhs11104.1355-25E420.94
stomach, neonate N30.CNhs11134.1386-42I1178.22
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E5114.65
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.23
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.45
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.14
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.24
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.85
whole body, embryo E17.5.CNhs10513.490-9F97.33
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B310.53
whole body, neonate N00.CNhs10525.657-19C213.11
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell3.79e-0925
endodermal cell1.16e-0820
intestinal epithelial cell5.37e-079
epithelial cell of alimentary canal5.37e-079

Uber anatomy
Ontology termp-valuen
endoderm-derived structure6.04e-21118
endoderm6.04e-21118
presumptive endoderm6.04e-21118
digestive system4.43e-20116
digestive tract4.43e-20116
primitive gut4.43e-20116
subdivision of digestive tract9.03e-19114
intestine9.28e-1931
gastrointestinal system1.25e-1647
digestive tract diverticulum9.35e-1223
sac9.35e-1223
mucosa1.50e-1115
liver3.96e-1122
epithelial sac3.96e-1122
digestive gland3.96e-1122
epithelium of foregut-midgut junction3.96e-1122
anatomical boundary3.96e-1122
hepatobiliary system3.96e-1122
foregut-midgut junction3.96e-1122
hepatic diverticulum3.96e-1122
liver primordium3.96e-1122
septum transversum3.96e-1122
liver bud3.96e-1122
intestinal mucosa3.63e-1013
wall of intestine3.63e-1013
gastrointestinal system mucosa3.63e-1013
exocrine gland1.86e-0925
exocrine system1.86e-0925
organ component layer4.76e-0824
endo-epithelium2.77e-0769
epithelium of mucosa5.37e-079
gastrointestinal system epithelium5.37e-079
intestinal epithelium5.37e-079







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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