FFCP PHASE1:Mm9::chr15:75397038..75397088,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=23934|HGNC=|MCL_coexpression_id=870|UniProt=Q9WUC3,Q544M1,Q8K356|association_with_transcript=0bp_to_ENSMUST00000023241,ENSMUST00000126129,ENSMUST00000150125,ENSMUST00000163116,NM_001135689,uc007wgu.1,uc011zuk.1_5end|description=CAGE_peak_4_at_Ly6h_5end|id=chr15:75397038..75397088,-|ontology_enrichment_celltype=CL:0000117!2.27e-17!23;CL:0000337!2.27e-17!23;CL:0000540!1.33e-16!33;CL:0000047!1.33e-16!33;CL:0000031!1.33e-16!33;CL:0000404!1.33e-16!33;CL:0000221!7.77e-13!44;CL:0000133!7.77e-13!44;CL:0002319!1.68e-12!43;CL:0000393!8.75e-12!39;CL:0000211!8.75e-12!39;CL:0000055!1.01e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.88e-24,23;CL:0000337,9.88e-24,23;CL:0000540,3.98e-16,33;CL:0000047,3.98e-16,33;CL:0000031,3.98e-16,33;CL:0000404,3.98e-16,33;CL:0000393,2.94e-12,39;CL:0000211,2.94e-12,39;CL:0000221,9.13e-12,44;CL:0000133,9.13e-12,44;CL:0002319,2.44e-11,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.77e-33!73;UBERON:0005743!1.77e-33!73;UBERON:0000073!1.66e-32!75;UBERON:0001016!1.66e-32!75;UBERON:0001049!7.14e-29!52;UBERON:0005068!7.14e-29!52;UBERON:0006241!7.14e-29!52;UBERON:0007135!7.14e-29!52;UBERON:0000955!7.63e-27!50;UBERON:0006238!7.63e-27!50;UBERON:0002346!1.40e-26!71;UBERON:0003075!1.40e-26!71;UBERON:0007284!1.40e-26!71;UBERON:0002616!2.79e-26!49;UBERON:0004121!8.92e-25!102;UBERON:0000924!8.92e-25!102;UBERON:0006601!8.92e-25!102;UBERON:0000033!4.95e-24!63;UBERON:0003080!1.61e-23!40;UBERON:0002780!6.86e-23!39;UBERON:0001890!6.86e-23!39;UBERON:0006240!6.86e-23!39;UBERON:0003056!1.93e-21!49;UBERON:0002020!5.00e-20!34;UBERON:0002791!5.65e-16!29;UBERON:0003528!5.65e-16!29;UBERON:0001893!5.65e-16!29;UBERON:0007811!3.18e-12!86;UBERON:0000153!1.03e-11!94;UBERON:0000956!3.53e-10!21;UBERON:0001869!3.53e-10!21;UBERON:0000203!3.53e-10!21;UBERON:0002619!4.22e-08!17;UBERON:0001894!7.15e-08!10;UBERON:0006222!7.15e-08!10;UBERON:0002021!2.36e-07!10;UBERON:0000411!2.36e-07!10;UBERON:0001950!2.36e-07!10;UBERON:0002420!2.73e-07!8;UBERON:0007245!2.73e-07!8;UBERON:0010009!2.73e-07!8;UBERON:0010011!2.73e-07!8;UBERON:0000454!2.73e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.71e-41,54;UBERON:0001049,2.17e-38,52;UBERON:0005068,2.17e-38,52;UBERON:0006241,2.17e-38,52;UBERON:0007135,2.17e-38,52;UBERON:0001017,1.34e-37,73;UBERON:0001016,4.77e-36,75;UBERON:0003080,3.92e-33,40;UBERON:0000955,2.00e-32,47;UBERON:0006238,2.00e-32,47;UBERON:0002780,3.01e-32,39;UBERON:0001890,3.01e-32,39;UBERON:0006240,3.01e-32,39;UBERON:0002616,1.19e-31,46;UBERON:0002346,1.35e-30,64;UBERON:0003075,1.35e-30,64;UBERON:0007284,1.35e-30,64;UBERON:0002020,3.25e-28,34;UBERON:0004121,2.31e-26,95;UBERON:0000924,2.31e-26,95;UBERON:0006601,2.31e-26,95;UBERON:0003056,7.58e-26,49;UBERON:0010371,9.38e-26,73;UBERON:0003528,1.75e-22,29;UBERON:0002791,1.75e-22,29;UBERON:0001893,1.75e-22,29;UBERON:0010314,7.33e-17,92;UBERON:0000956,2.77e-14,21;UBERON:0001869,2.77e-14,21;UBERON:0000203,2.77e-14,21;UBERON:0002619,2.35e-11,17;UBERON:0001894,2.07e-10,10;UBERON:0006222,2.07e-10,10;UBERON:0002021,1.10e-09,10;UBERON:0000411,1.10e-09,10;UBERON:0001950,1.10e-09,10;UBERON:0002420,1.34e-09,8;UBERON:0007245,1.34e-09,8;UBERON:0010009,1.34e-09,8;UBERON:0010011,1.34e-09,8;UBERON:0000454,1.34e-09,8;UBERON:0000025,2.37e-09,114;UBERON:0000007,1.27e-08,8;UBERON:0003296,1.27e-08,8;UBERON:0010133,1.27e-08,8;UBERON:0004111,2.62e-08,122;UBERON:0002240,1.61e-07,6;UBERON:0005174,1.61e-07,6;UBERON:0001137,1.61e-07,6;UBERON:0001948,5.47e-07,5;UBERON:0002315,5.47e-07,5|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,16.7922662513466,16.398720357433,24.719424736741,0,0,0,0,0,0.599200221036809,3.84218305321555,6.84351441235953,4.72520784160917,6.73039876324422,41.1337417541477,37.3267834208227,8.69684674426174,7.09256485534949,8.27296907949019,14.3150645299205,12.1302971180928,12.7493422602682,16.4857859662742,17.3826522844578,15.6274011167028,16.4717969410815,38.2678574821542,27.350886352049,22.3917724959987,25.6269025438385,17.5215479075783,0.227178579999552,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.54927761754349,0,0,0,0,0,0,0.68510327831436,0,0,0.867426633830679,0.304465478312141,0.922461989024234,0.60289056221049,0.705532242814229,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,7.63932260964596,9.15001205637253,19.8533876338326,7.12679712788333,6.90431734791892,10.5971902725376,10.8701646255398,2.03678727700633,0,0,0,0,0.919608417733892,0.540186389416048,2.10986744970001,0.95251098811859,0.2562274405697,0.843315521037559,0,0,0.189106080167819,1.75951124163949,2.41115305670332,1.11218899690239,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0.292399974850665,0,0,7.99101804543684,5.04232600658494,0,0,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0.251335208800269,0,0,0,0,0,0.569003702859245,0.342745537829186,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,3.37156238974363,4.21962071731931,0,0,1.57754109708128,0.780877488593277,0.215423397732799,0.716906393857656,0.445597348164788,0.849229592366497,0,1.16902343164525,0.395287777946524,4.17717711348349,0,3.20518086601059,1.95464351224291,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0,0,0,23.4903327970114,1.8006109403131,4.01011919726539,7.28745919107414,15.9606210278046,22.4744710178609,22.7077648430927,45.3652774180753,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.474503990371703,1.42323626988794,1.08005340821801,1.04544148007234,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0,0.165458490457098,1.75006069509643,2.0665571756437,0.675824501963113,0.58678619322877,0.5208175393758,0.104859344425711,0,0,0,1.01362607645082,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,5.64751842617067,8.28585425712918,8.02053718815155,13.5764014051513,9.59115527678899,9.82012066606611,6.07520250208625,9.00642406448441,9.06284817968409,8.80192529978094,0.207574695168353,1.59609949360412,1.36586884603307,1.70174701947806,1.46729213839588,2.02227859295016,2.00022055021454,0.824140228955577,0.320919209591815,0.758091635291392,0.760437899670719,1.69763707247469,0.468207537349412,1.85672941974121,1.49332219284595,0.476293691283074,1.0429589335037,2.12200142510076,3.70877310722976,1.76638704161277,1.02860775715625,1.24233064311536,1.66905332963125,2.0348498328526,1.12931256498397,1.01537529470012,1.64635175585495,0.526139422875686,0.950628796921032,1.12228454331548,1.66089025373844,1.47756723563345,2.45538625901814,1.23949472948773,2.12197272079256,4.24677982494508,1.40358965067245,0.859484216193193,0.765153328275374,0.220591419119515,0.463735671240843|short_description=p4@Ly6h}} | ||
|EntrezGene=23934 | |||
|HGNC= | |||
|MCL_coexpression_id=870 | |||
|UniProt=Q9WUC3,Q544M1,Q8K356 | |||
|association_with_transcript=0bp_to_ENSMUST00000023241,ENSMUST00000126129,ENSMUST00000150125,ENSMUST00000163116,NM_001135689,uc007wgu.1,uc011zuk.1_5end | |||
|description=CAGE_peak_4_at_Ly6h_5end | |||
|id=chr15:75397038..75397088,- | |||
|ontology_enrichment_celltype=CL:0000117!2.27e-17!23;CL:0000337!2.27e-17!23;CL:0000540!1.33e-16!33;CL:0000047!1.33e-16!33;CL:0000031!1.33e-16!33;CL:0000404!1.33e-16!33;CL:0000221!7.77e-13!44;CL:0000133!7.77e-13!44;CL:0002319!1.68e-12!43;CL:0000393!8.75e-12!39;CL:0000211!8.75e-12!39;CL:0000055!1.01e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.88e-24,23;CL:0000337,9.88e-24,23;CL:0000540,3.98e-16,33;CL:0000047,3.98e-16,33;CL:0000031,3.98e-16,33;CL:0000404,3.98e-16,33;CL:0000393,2.94e-12,39;CL:0000211,2.94e-12,39;CL:0000221,9.13e-12,44;CL:0000133,9.13e-12,44;CL:0002319,2.44e-11,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.77e-33!73;UBERON:0005743!1.77e-33!73;UBERON:0000073!1.66e-32!75;UBERON:0001016!1.66e-32!75;UBERON:0001049!7.14e-29!52;UBERON:0005068!7.14e-29!52;UBERON:0006241!7.14e-29!52;UBERON:0007135!7.14e-29!52;UBERON:0000955!7.63e-27!50;UBERON:0006238!7.63e-27!50;UBERON:0002346!1.40e-26!71;UBERON:0003075!1.40e-26!71;UBERON:0007284!1.40e-26!71;UBERON:0002616!2.79e-26!49;UBERON:0004121!8.92e-25!102;UBERON:0000924!8.92e-25!102;UBERON:0006601!8.92e-25!102;UBERON:0000033!4.95e-24!63;UBERON:0003080!1.61e-23!40;UBERON:0002780!6.86e-23!39;UBERON:0001890!6.86e-23!39;UBERON:0006240!6.86e-23!39;UBERON:0003056!1.93e-21!49;UBERON:0002020!5.00e-20!34;UBERON:0002791!5.65e-16!29;UBERON:0003528!5.65e-16!29;UBERON:0001893!5.65e-16!29;UBERON:0007811!3.18e-12!86;UBERON:0000153!1.03e-11!94;UBERON:0000956!3.53e-10!21;UBERON:0001869!3.53e-10!21;UBERON:0000203!3.53e-10!21;UBERON:0002619!4.22e-08!17;UBERON:0001894!7.15e-08!10;UBERON:0006222!7.15e-08!10;UBERON:0002021!2.36e-07!10;UBERON:0000411!2.36e-07!10;UBERON:0001950!2.36e-07!10;UBERON:0002420!2.73e-07!8;UBERON:0007245!2.73e-07!8;UBERON:0010009!2.73e-07!8;UBERON:0010011!2.73e-07!8;UBERON:0000454!2.73e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.71e-41,54;UBERON:0001049,2.17e-38,52;UBERON:0005068,2.17e-38,52;UBERON:0006241,2.17e-38,52;UBERON:0007135,2.17e-38,52;UBERON:0001017,1.34e-37,73;UBERON:0001016,4.77e-36,75;UBERON:0003080,3.92e-33,40;UBERON:0000955,2.00e-32,47;UBERON:0006238,2.00e-32,47;UBERON:0002780,3.01e-32,39;UBERON:0001890,3.01e-32,39;UBERON:0006240,3.01e-32,39;UBERON:0002616,1.19e-31,46;UBERON:0002346,1.35e-30,64;UBERON:0003075,1.35e-30,64;UBERON:0007284,1.35e-30,64;UBERON:0002020,3.25e-28,34;UBERON:0004121,2.31e-26,95;UBERON:0000924,2.31e-26,95;UBERON:0006601,2.31e-26,95;UBERON:0003056,7.58e-26,49;UBERON:0010371,9.38e-26,73;UBERON:0003528,1.75e-22,29;UBERON:0002791,1.75e-22,29;UBERON:0001893,1.75e-22,29;UBERON:0010314,7.33e-17,92;UBERON:0000956,2.77e-14,21;UBERON:0001869,2.77e-14,21;UBERON:0000203,2.77e-14,21;UBERON:0002619,2.35e-11,17;UBERON:0001894,2.07e-10,10;UBERON:0006222,2.07e-10,10;UBERON:0002021,1.10e-09,10;UBERON:0000411,1.10e-09,10;UBERON:0001950,1.10e-09,10;UBERON:0002420,1.34e-09,8;UBERON:0007245,1.34e-09,8;UBERON:0010009,1.34e-09,8;UBERON:0010011,1.34e-09,8;UBERON:0000454,1.34e-09,8;UBERON:0000025,2.37e-09,114;UBERON:0000007,1.27e-08,8;UBERON:0003296,1.27e-08,8;UBERON:0010133,1.27e-08,8;UBERON:0004111,2.62e-08,122;UBERON:0002240,1.61e-07,6;UBERON:0005174,1.61e-07,6;UBERON:0001137,1.61e-07,6;UBERON:0001948,5.47e-07,5;UBERON:0002315,5.47e-07,5 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,16.7922662513466,16.398720357433,24.719424736741,0,0,0,0,0,0.599200221036809,3.84218305321555,6.84351441235953,4.72520784160917,6.73039876324422,41.1337417541477,37.3267834208227,8.69684674426174,7.09256485534949,8.27296907949019,14.3150645299205,12.1302971180928,12.7493422602682,16.4857859662742,17.3826522844578,15.6274011167028,16.4717969410815,38.2678574821542,27.350886352049,22.3917724959987,25.6269025438385,17.5215479075783,0.227178579999552,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.54927761754349,0,0,0,0,0,0,0.68510327831436,0,0,0.867426633830679,0.304465478312141,0.922461989024234,0.60289056221049,0.705532242814229,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,7.63932260964596,9.15001205637253,19.8533876338326,7.12679712788333,6.90431734791892,10.5971902725376,10.8701646255398,2.03678727700633,0,0,0,0,0.919608417733892,0.540186389416048,2.10986744970001,0.95251098811859,0.2562274405697,0.843315521037559,0,0,0.189106080167819,1.75951124163949,2.41115305670332,1.11218899690239,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0.292399974850665,0,0,7.99101804543684,5.04232600658494,0,0,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0.251335208800269,0,0,0,0,0,0.569003702859245,0.342745537829186,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,3.37156238974363,4.21962071731931,0,0,1.57754109708128,0.780877488593277,0.215423397732799,0.716906393857656,0.445597348164788,0.849229592366497,0,1.16902343164525,0.395287777946524,4.17717711348349,0,3.20518086601059,1.95464351224291,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0,0,0,23.4903327970114,1.8006109403131,4.01011919726539,7.28745919107414,15.9606210278046,22.4744710178609,22.7077648430927,45.3652774180753,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.474503990371703,1.42323626988794,1.08005340821801,1.04544148007234,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0,0.165458490457098,1.75006069509643,2.0665571756437,0.675824501963113,0.58678619322877,0.5208175393758,0.104859344425711,0,0,0,1.01362607645082,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,5.64751842617067,8.28585425712918,8.02053718815155,13.5764014051513,9.59115527678899,9.82012066606611,6.07520250208625,9.00642406448441,9.06284817968409,8.80192529978094,0.207574695168353,1.59609949360412,1.36586884603307,1.70174701947806,1.46729213839588,2.02227859295016,2.00022055021454,0.824140228955577,0.320919209591815,0.758091635291392,0.760437899670719,1.69763707247469,0.468207537349412,1.85672941974121,1.49332219284595,0.476293691283074,1.0429589335037,2.12200142510076,3.70877310722976,1.76638704161277,1.02860775715625,1.24233064311536,1.66905332963125,2.0348498328526,1.12931256498397,1.01537529470012,1.64635175585495,0.526139422875686,0.950628796921032,1.12228454331548,1.66089025373844,1.47756723563345,2.45538625901814,1.23949472948773,2.12197272079256,4.24677982494508,1.40358965067245,0.859484216193193,0.765153328275374,0.220591419119515,0.463735671240843 | |||
|short_description=p4@Ly6h | |||
}} |
Revision as of 10:54, 13 September 2013
Short description: | p4@Ly6h |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ly6h_5end |
Coexpression cluster: | MCL_coexpression_mm9:870 |
Association with transcript: | 0bp_to_ENSMUST00000023241, ENSMUST00000126129, ENSMUST00000150125, ENSMUST00000163116, NM_001135689, uc007wgu.1, uc011zuk.1_5end |
EntrezGene: | Ly6h |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.88e-24 | 23 |
neuroblast (sensu Vertebrata) | 9.88e-24 | 23 |
neuron | 3.98e-16 | 33 |
neuronal stem cell | 3.98e-16 | 33 |
neuroblast | 3.98e-16 | 33 |
electrically signaling cell | 3.98e-16 | 33 |
electrically responsive cell | 2.94e-12 | 39 |
electrically active cell | 2.94e-12 | 39 |
ectodermal cell | 9.13e-12 | 44 |
neurectodermal cell | 9.13e-12 | 44 |
neural cell | 2.44e-11 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.