FFCP PHASE1:Mm9::chr15:60018877..60018886,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=7|UniProt=|association_with_transcript=76bp_to_uc007vxz.1_5end|description=CAGE_peak_7_at_uc007vxz.1_5end|id=chr15:60018877..60018886,-|ontology_enrichment_celltype=CL:0000791!1.78e-47!9;CL:0000789!1.78e-47!9;CL:0002420!1.78e-47!9;CL:0002419!1.78e-47!9;CL:0000790!1.78e-47!9;CL:0000624!1.70e-42!8;CL:0000084!1.14e-38!11;CL:0000827!1.14e-38!11;CL:0000838!2.29e-35!12;CL:0000542!1.44e-32!13;CL:0000051!1.44e-32!13;CL:0000893!2.13e-32!6;CL:0002489!2.13e-32!6;CL:0000898!2.13e-32!6;CL:0000809!2.13e-32!6;CL:0000810!2.13e-32!6;CL:0000895!2.13e-32!6;CL:0000808!2.13e-32!6;CL:0000894!2.13e-32!6;CL:0000806!2.13e-32!6;CL:0000807!2.13e-32!6;CL:0000805!2.13e-32!6;CL:0002425!2.13e-32!6;CL:0002436!2.13e-32!6;CL:0002427!2.13e-32!6;CL:0002428!2.13e-32!6;CL:0002429!2.13e-32!6;CL:0002433!2.13e-32!6;CL:0002431!2.13e-32!6;CL:0002432!2.13e-32!6;CL:0000738!1.16e-24!17;CL:0002087!1.16e-24!17;CL:0002031!2.49e-24!25;CL:0000988!1.09e-18!32;CL:0002032!1.09e-18!32;CL:0000037!1.09e-18!32;CL:0000566!1.09e-18!32;CL:0000837!1.09e-18!32;CL:0002320!1.54e-12!46;CL:0000134!1.54e-12!46;CL:0000219!1.89e-10!54;CL:0000063!2.92e-08!66|ontology_enrichment_celltype_v019_2=CL:0000624,1.46e-45,8;CL:0000791,1.39e-40,9;CL:0000789,1.39e-40,9;CL:0002420,1.39e-40,9;CL:0002419,1.39e-40,9;CL:0000790,1.39e-40,9;CL:0000893,2.40e-39,6;CL:0002489,2.40e-39,6;CL:0000898,2.40e-39,6;CL:0000809,2.40e-39,6;CL:0000810,2.40e-39,6;CL:0000895,2.40e-39,6;CL:0000808,2.40e-39,6;CL:0000894,2.40e-39,6;CL:0000806,2.40e-39,6;CL:0000807,2.40e-39,6;CL:0000805,2.40e-39,6;CL:0002425,2.40e-39,6;CL:0002436,2.40e-39,6;CL:0002427,2.40e-39,6;CL:0002428,2.40e-39,6;CL:0002429,2.40e-39,6;CL:0002433,2.40e-39,6;CL:0002431,2.40e-39,6;CL:0002432,2.40e-39,6;CL:0000084,2.46e-33,11;CL:0000827,2.46e-33,11;CL:0000838,1.29e-30,12;CL:0000542,2.59e-28,13;CL:0000051,2.59e-28,13;CL:0000738,8.45e-22,17;CL:0002087,8.45e-22,17;CL:0000815,1.86e-15,1;CL:0000792,1.86e-15,1;CL:0002031,5.31e-15,25;CL:0000988,7.97e-12,32;CL:0002032,7.97e-12,32;CL:0000037,7.97e-12,32;CL:0000837,7.97e-12,32;CL:0002320,2.39e-08,46;CL:0000134,2.39e-08,46;CL:0000219,3.67e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.54e-12!46;UBERON:0002193!6.61e-12!48;UBERON:0004177!5.73e-11!29;UBERON:0002370!7.04e-11!23;UBERON:0000974!7.04e-11!23;UBERON:0004807!7.04e-11!23;UBERON:0005058!7.04e-11!23;UBERON:0003351!7.04e-11!23;UBERON:0009113!7.04e-11!23;UBERON:0003295!7.04e-11!23;UBERON:0009722!7.04e-11!23;UBERON:0005562!7.04e-11!23;UBERON:0007690!7.04e-11!23;UBERON:0002390!1.86e-10!45;UBERON:0003061!1.86e-10!45;UBERON:0006562!2.14e-10!24;UBERON:0003408!2.14e-10!24;UBERON:0001557!2.14e-10!24;UBERON:0001042!2.14e-10!24;UBERON:0008814!2.14e-10!24;UBERON:0009145!2.14e-10!24;UBERON:0000072!3.67e-09!27;UBERON:0002405!1.15e-07!70;UBERON:0000065!1.94e-07!41;UBERON:0001004!3.08e-07!42;UBERON:0003081!6.12e-07!88;UBERON:0000063!6.69e-07!35;UBERON:0000029!8.36e-07!1;UBERON:0001097!8.36e-07!1;UBERON:0003968!8.36e-07!1;UBERON:0008785!8.36e-07!1;UBERON:0001467!8.36e-07!1;UBERON:0001421!8.36e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0000029,9.51e-16,1;UBERON:0001097,9.51e-16,1;UBERON:0003968,9.51e-16,1;UBERON:0001467,9.51e-16,1;UBERON:0002370,9.29e-11,23;UBERON:0000974,9.29e-11,23;UBERON:0004807,9.29e-11,23;UBERON:0005058,9.29e-11,23;UBERON:0003351,9.29e-11,23;UBERON:0009113,9.29e-11,23;UBERON:0003295,9.29e-11,23;UBERON:0009722,9.29e-11,23;UBERON:0005562,9.29e-11,23;UBERON:0007690,9.29e-11,23;UBERON:0006562,2.47e-10,24;UBERON:0003408,2.47e-10,24;UBERON:0001557,2.47e-10,24;UBERON:0001042,2.47e-10,24;UBERON:0008814,2.47e-10,24;UBERON:0009145,2.47e-10,24;UBERON:0000072,3.04e-09,27;UBERON:0004177,1.22e-08,29;UBERON:0005057,1.22e-08,29;UBERON:0002384,2.39e-08,46;UBERON:0002193,4.79e-08,48;UBERON:0002405,4.79e-08,48;UBERON:0000077,3.07e-07,35;UBERON:0007811,4.73e-07,36|phase1_expression=0,0,0,0,0,0,0,1.54947988129892,9.01047821770667,6.78787126333781,0.513653904676515,0.797721589953364,2.05440875917447,2.88487327982691,0,0.202475267389826,0,0,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07150306917737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292373642219257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@uc007vxz.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt= | |||
|association_with_transcript=76bp_to_uc007vxz.1_5end | |||
|description=CAGE_peak_7_at_uc007vxz.1_5end | |||
|id=chr15:60018877..60018886,- | |||
|ontology_enrichment_celltype=CL:0000791!1.78e-47!9;CL:0000789!1.78e-47!9;CL:0002420!1.78e-47!9;CL:0002419!1.78e-47!9;CL:0000790!1.78e-47!9;CL:0000624!1.70e-42!8;CL:0000084!1.14e-38!11;CL:0000827!1.14e-38!11;CL:0000838!2.29e-35!12;CL:0000542!1.44e-32!13;CL:0000051!1.44e-32!13;CL:0000893!2.13e-32!6;CL:0002489!2.13e-32!6;CL:0000898!2.13e-32!6;CL:0000809!2.13e-32!6;CL:0000810!2.13e-32!6;CL:0000895!2.13e-32!6;CL:0000808!2.13e-32!6;CL:0000894!2.13e-32!6;CL:0000806!2.13e-32!6;CL:0000807!2.13e-32!6;CL:0000805!2.13e-32!6;CL:0002425!2.13e-32!6;CL:0002436!2.13e-32!6;CL:0002427!2.13e-32!6;CL:0002428!2.13e-32!6;CL:0002429!2.13e-32!6;CL:0002433!2.13e-32!6;CL:0002431!2.13e-32!6;CL:0002432!2.13e-32!6;CL:0000738!1.16e-24!17;CL:0002087!1.16e-24!17;CL:0002031!2.49e-24!25;CL:0000988!1.09e-18!32;CL:0002032!1.09e-18!32;CL:0000037!1.09e-18!32;CL:0000566!1.09e-18!32;CL:0000837!1.09e-18!32;CL:0002320!1.54e-12!46;CL:0000134!1.54e-12!46;CL:0000219!1.89e-10!54;CL:0000063!2.92e-08!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.46e-45,8;CL:0000791,1.39e-40,9;CL:0000789,1.39e-40,9;CL:0002420,1.39e-40,9;CL:0002419,1.39e-40,9;CL:0000790,1.39e-40,9;CL:0000893,2.40e-39,6;CL:0002489,2.40e-39,6;CL:0000898,2.40e-39,6;CL:0000809,2.40e-39,6;CL:0000810,2.40e-39,6;CL:0000895,2.40e-39,6;CL:0000808,2.40e-39,6;CL:0000894,2.40e-39,6;CL:0000806,2.40e-39,6;CL:0000807,2.40e-39,6;CL:0000805,2.40e-39,6;CL:0002425,2.40e-39,6;CL:0002436,2.40e-39,6;CL:0002427,2.40e-39,6;CL:0002428,2.40e-39,6;CL:0002429,2.40e-39,6;CL:0002433,2.40e-39,6;CL:0002431,2.40e-39,6;CL:0002432,2.40e-39,6;CL:0000084,2.46e-33,11;CL:0000827,2.46e-33,11;CL:0000838,1.29e-30,12;CL:0000542,2.59e-28,13;CL:0000051,2.59e-28,13;CL:0000738,8.45e-22,17;CL:0002087,8.45e-22,17;CL:0000815,1.86e-15,1;CL:0000792,1.86e-15,1;CL:0002031,5.31e-15,25;CL:0000988,7.97e-12,32;CL:0002032,7.97e-12,32;CL:0000037,7.97e-12,32;CL:0000837,7.97e-12,32;CL:0002320,2.39e-08,46;CL:0000134,2.39e-08,46;CL:0000219,3.67e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.54e-12!46;UBERON:0002193!6.61e-12!48;UBERON:0004177!5.73e-11!29;UBERON:0002370!7.04e-11!23;UBERON:0000974!7.04e-11!23;UBERON:0004807!7.04e-11!23;UBERON:0005058!7.04e-11!23;UBERON:0003351!7.04e-11!23;UBERON:0009113!7.04e-11!23;UBERON:0003295!7.04e-11!23;UBERON:0009722!7.04e-11!23;UBERON:0005562!7.04e-11!23;UBERON:0007690!7.04e-11!23;UBERON:0002390!1.86e-10!45;UBERON:0003061!1.86e-10!45;UBERON:0006562!2.14e-10!24;UBERON:0003408!2.14e-10!24;UBERON:0001557!2.14e-10!24;UBERON:0001042!2.14e-10!24;UBERON:0008814!2.14e-10!24;UBERON:0009145!2.14e-10!24;UBERON:0000072!3.67e-09!27;UBERON:0002405!1.15e-07!70;UBERON:0000065!1.94e-07!41;UBERON:0001004!3.08e-07!42;UBERON:0003081!6.12e-07!88;UBERON:0000063!6.69e-07!35;UBERON:0000029!8.36e-07!1;UBERON:0001097!8.36e-07!1;UBERON:0003968!8.36e-07!1;UBERON:0008785!8.36e-07!1;UBERON:0001467!8.36e-07!1;UBERON:0001421!8.36e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,9.51e-16,1;UBERON:0001097,9.51e-16,1;UBERON:0003968,9.51e-16,1;UBERON:0001467,9.51e-16,1;UBERON:0002370,9.29e-11,23;UBERON:0000974,9.29e-11,23;UBERON:0004807,9.29e-11,23;UBERON:0005058,9.29e-11,23;UBERON:0003351,9.29e-11,23;UBERON:0009113,9.29e-11,23;UBERON:0003295,9.29e-11,23;UBERON:0009722,9.29e-11,23;UBERON:0005562,9.29e-11,23;UBERON:0007690,9.29e-11,23;UBERON:0006562,2.47e-10,24;UBERON:0003408,2.47e-10,24;UBERON:0001557,2.47e-10,24;UBERON:0001042,2.47e-10,24;UBERON:0008814,2.47e-10,24;UBERON:0009145,2.47e-10,24;UBERON:0000072,3.04e-09,27;UBERON:0004177,1.22e-08,29;UBERON:0005057,1.22e-08,29;UBERON:0002384,2.39e-08,46;UBERON:0002193,4.79e-08,48;UBERON:0002405,4.79e-08,48;UBERON:0000077,3.07e-07,35;UBERON:0007811,4.73e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,1.54947988129892,9.01047821770667,6.78787126333781,0.513653904676515,0.797721589953364,2.05440875917447,2.88487327982691,0,0.202475267389826,0,0,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07150306917737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292373642219257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@uc007vxz.1 | |||
}} |
Revision as of 10:39, 13 September 2013
Short description: | p7@uc007vxz.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_uc007vxz.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 76bp_to_uc007vxz.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 9.51e-16 | 1 |
axillary lymph node | 9.51e-16 | 1 |
peripheral lymph node | 9.51e-16 | 1 |
shoulder | 9.51e-16 | 1 |
thymus | 9.29e-11 | 23 |
neck | 9.29e-11 | 23 |
respiratory system epithelium | 9.29e-11 | 23 |
hemolymphoid system gland | 9.29e-11 | 23 |
pharyngeal epithelium | 9.29e-11 | 23 |
thymic region | 9.29e-11 | 23 |
pharyngeal gland | 9.29e-11 | 23 |
entire pharyngeal arch endoderm | 9.29e-11 | 23 |
thymus primordium | 9.29e-11 | 23 |
early pharyngeal endoderm | 9.29e-11 | 23 |
pharynx | 2.47e-10 | 24 |
gland of gut | 2.47e-10 | 24 |
upper respiratory tract | 2.47e-10 | 24 |
chordate pharynx | 2.47e-10 | 24 |
pharyngeal arch system | 2.47e-10 | 24 |
pharyngeal region of foregut | 2.47e-10 | 24 |
segment of respiratory tract | 3.04e-09 | 27 |
hemopoietic organ | 1.22e-08 | 29 |
immune organ | 1.22e-08 | 29 |
connective tissue | 2.39e-08 | 46 |
hemolymphoid system | 4.79e-08 | 48 |
immune system | 4.79e-08 | 48 |
mixed endoderm/mesoderm-derived structure | 3.07e-07 | 35 |
craniocervical region | 4.73e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.