FFCP PHASE1:Mm9::chr14:9211404..9211411,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18300|HGNC=|MCL_coexpression_id=12|UniProt=P97805|association_with_transcript=-127bp_to_ENSMUST00000022269,NM_146050,uc007sfd.1_5end|description=CAGE_peak_7_at_Oit1_5end|id=chr14:9211404..9211411,-|ontology_enrichment_celltype=CL:0002563!7.33e-12!9;CL:0002251!7.33e-12!9;CL:0002076!3.12e-11!15;CL:0000066!4.25e-09!25;CL:0000239!1.39e-08!6;CL:0000677!1.39e-08!6;CL:0000212!1.39e-08!6;CL:0000584!1.39e-08!6;CL:0000223!1.62e-07!20;CL:0000075!3.66e-07!7|ontology_enrichment_celltype_v019_2=CL:0002076,6.61e-23,15;CL:0002563,1.78e-21,9;CL:0002251,1.78e-21,9;CL:0000066,2.09e-21,25;CL:0000223,1.15e-16,20;CL:0000239,1.40e-13,6;CL:0000677,1.40e-13,6;CL:0000584,1.40e-13,6;CL:0000075,1.34e-11,7;CL:0000682,7.77e-10,3;CL:0002250,1.45e-09,3;CL:0000068,3.53e-09,3;CL:0002202,3.53e-09,3;CL:0000069,3.53e-09,3;CL:0002632,3.53e-09,3;CL:0002368,3.53e-09,3;CL:0000307,3.53e-09,3;CL:0000377,3.53e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.61e-18!15;UBERON:0005409!6.89e-17!59;UBERON:0001007!7.13e-17!128;UBERON:0001555!7.13e-17!128;UBERON:0007026!7.13e-17!128;UBERON:0004119!2.34e-16!130;UBERON:0000925!2.34e-16!130;UBERON:0006595!2.34e-16!130;UBERON:0001242!2.41e-16!13;UBERON:0000060!2.41e-16!13;UBERON:0001262!2.41e-16!13;UBERON:0004786!2.41e-16!13;UBERON:0004921!2.40e-15!126;UBERON:0004185!2.40e-15!126;UBERON:0000160!4.18e-13!43;UBERON:0003350!7.33e-12!9;UBERON:0004808!7.33e-12!9;UBERON:0001277!7.33e-12!9;UBERON:0004923!1.06e-09!24;UBERON:0000485!3.17e-09!11|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.84e-33,15;UBERON:0001242,1.51e-27,13;UBERON:0001262,1.51e-27,13;UBERON:0004786,1.51e-27,13;UBERON:0000160,9.92e-27,31;UBERON:0003350,1.78e-21,9;UBERON:0004808,1.78e-21,9;UBERON:0001277,1.78e-21,9;UBERON:0005409,4.39e-21,47;UBERON:0004923,1.64e-19,24;UBERON:0000485,2.38e-17,11;UBERON:0001007,1.27e-13,116;UBERON:0001555,1.27e-13,116;UBERON:0007026,1.27e-13,116;UBERON:0004119,2.62e-13,118;UBERON:0000925,2.62e-13,118;UBERON:0006595,2.62e-13,118;UBERON:0004921,2.01e-11,114;UBERON:0003126,3.53e-09,3;UBERON:0001005,3.53e-09,3;UBERON:0007196,3.53e-09,3;UBERON:0001558,3.53e-09,3;UBERON:0001962,9.23e-07,2;UBERON:0001961,9.23e-07,2;UBERON:0001744,9.23e-07,2|phase1_expression=0,6.63053274514786,3.63999391511629,6.35174843744343,6.51164448930251,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.23989391910769,1.37645568640302,3.44539178469012,2.58457197695445,1.939241094173,2.85035129184561,1.51218077855958,0.665191531965914,0,0,0,1.44425809875637,2.1610503896604,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,1.08245520505607,1.52015919285059,2.02209778005913,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.40825460104915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,10.5734010554815,5.02456076660734,0,0,0,0.201683524623343,0.22237804384487,0,3.32170343081158,0,0.502670417600539,0,0.19496408711912,3.59527763461689,4.10662294761919,3.98282546508734,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0.203319467126849,0.432021363287205,0.209088296014469,0.436725127492355,0.539457385539283,0.495920734352016,0.523511883968059,3.88844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.240390899039938,0.295379054349154,0.201932899896295,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,1.9318959403219,0.187682475451182,0.915758121336325,1.71494703263253,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0.347652977834566,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p7@Oit1}} | ||
|EntrezGene=18300 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=P97805 | |||
|association_with_transcript=-127bp_to_ENSMUST00000022269,NM_146050,uc007sfd.1_5end | |||
|description=CAGE_peak_7_at_Oit1_5end | |||
|id=chr14:9211404..9211411,- | |||
|ontology_enrichment_celltype=CL:0002563!7.33e-12!9;CL:0002251!7.33e-12!9;CL:0002076!3.12e-11!15;CL:0000066!4.25e-09!25;CL:0000239!1.39e-08!6;CL:0000677!1.39e-08!6;CL:0000212!1.39e-08!6;CL:0000584!1.39e-08!6;CL:0000223!1.62e-07!20;CL:0000075!3.66e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.61e-23,15;CL:0002563,1.78e-21,9;CL:0002251,1.78e-21,9;CL:0000066,2.09e-21,25;CL:0000223,1.15e-16,20;CL:0000239,1.40e-13,6;CL:0000677,1.40e-13,6;CL:0000584,1.40e-13,6;CL:0000075,1.34e-11,7;CL:0000682,7.77e-10,3;CL:0002250,1.45e-09,3;CL:0000068,3.53e-09,3;CL:0002202,3.53e-09,3;CL:0000069,3.53e-09,3;CL:0002632,3.53e-09,3;CL:0002368,3.53e-09,3;CL:0000307,3.53e-09,3;CL:0000377,3.53e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.61e-18!15;UBERON:0005409!6.89e-17!59;UBERON:0001007!7.13e-17!128;UBERON:0001555!7.13e-17!128;UBERON:0007026!7.13e-17!128;UBERON:0004119!2.34e-16!130;UBERON:0000925!2.34e-16!130;UBERON:0006595!2.34e-16!130;UBERON:0001242!2.41e-16!13;UBERON:0000060!2.41e-16!13;UBERON:0001262!2.41e-16!13;UBERON:0004786!2.41e-16!13;UBERON:0004921!2.40e-15!126;UBERON:0004185!2.40e-15!126;UBERON:0000160!4.18e-13!43;UBERON:0003350!7.33e-12!9;UBERON:0004808!7.33e-12!9;UBERON:0001277!7.33e-12!9;UBERON:0004923!1.06e-09!24;UBERON:0000485!3.17e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.84e-33,15;UBERON:0001242,1.51e-27,13;UBERON:0001262,1.51e-27,13;UBERON:0004786,1.51e-27,13;UBERON:0000160,9.92e-27,31;UBERON:0003350,1.78e-21,9;UBERON:0004808,1.78e-21,9;UBERON:0001277,1.78e-21,9;UBERON:0005409,4.39e-21,47;UBERON:0004923,1.64e-19,24;UBERON:0000485,2.38e-17,11;UBERON:0001007,1.27e-13,116;UBERON:0001555,1.27e-13,116;UBERON:0007026,1.27e-13,116;UBERON:0004119,2.62e-13,118;UBERON:0000925,2.62e-13,118;UBERON:0006595,2.62e-13,118;UBERON:0004921,2.01e-11,114;UBERON:0003126,3.53e-09,3;UBERON:0001005,3.53e-09,3;UBERON:0007196,3.53e-09,3;UBERON:0001558,3.53e-09,3;UBERON:0001962,9.23e-07,2;UBERON:0001961,9.23e-07,2;UBERON:0001744,9.23e-07,2 | |||
|phase1_expression=0,6.63053274514786,3.63999391511629,6.35174843744343,6.51164448930251,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.23989391910769,1.37645568640302,3.44539178469012,2.58457197695445,1.939241094173,2.85035129184561,1.51218077855958,0.665191531965914,0,0,0,1.44425809875637,2.1610503896604,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,1.08245520505607,1.52015919285059,2.02209778005913,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.40825460104915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,10.5734010554815,5.02456076660734,0,0,0,0.201683524623343,0.22237804384487,0,3.32170343081158,0,0.502670417600539,0,0.19496408711912,3.59527763461689,4.10662294761919,3.98282546508734,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0.203319467126849,0.432021363287205,0.209088296014469,0.436725127492355,0.539457385539283,0.495920734352016,0.523511883968059,3.88844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.240390899039938,0.295379054349154,0.201932899896295,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,1.9318959403219,0.187682475451182,0.915758121336325,1.71494703263253,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0.347652977834566,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p7@Oit1 | |||
}} |
Revision as of 03:15, 13 September 2013
Short description: | p7@Oit1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Oit1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -127bp_to_ENSMUST00000022269, NM_146050, uc007sfd.1_5end |
EntrezGene: | Oit1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.61e-23 | 15 |
intestinal epithelial cell | 1.78e-21 | 9 |
epithelial cell of alimentary canal | 1.78e-21 | 9 |
epithelial cell | 2.09e-21 | 25 |
endodermal cell | 1.15e-16 | 20 |
brush border epithelial cell | 1.40e-13 | 6 |
gut absorptive cell | 1.40e-13 | 6 |
enterocyte | 1.40e-13 | 6 |
columnar/cuboidal epithelial cell | 1.34e-11 | 7 |
M cell of gut | 7.77e-10 | 3 |
intestinal crypt stem cell | 1.45e-09 | 3 |
duct epithelial cell | 3.53e-09 | 3 |
epithelial cell of tracheobronchial tree | 3.53e-09 | 3 |
branched duct epithelial cell | 3.53e-09 | 3 |
epithelial cell of lower respiratory tract | 3.53e-09 | 3 |
respiratory epithelial cell | 3.53e-09 | 3 |
tracheal epithelial cell | 3.53e-09 | 3 |
tracheoblast | 3.53e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.84e-33 | 15 |
intestinal mucosa | 1.51e-27 | 13 |
wall of intestine | 1.51e-27 | 13 |
gastrointestinal system mucosa | 1.51e-27 | 13 |
intestine | 9.92e-27 | 31 |
epithelium of mucosa | 1.78e-21 | 9 |
gastrointestinal system epithelium | 1.78e-21 | 9 |
intestinal epithelium | 1.78e-21 | 9 |
gastrointestinal system | 4.39e-21 | 47 |
organ component layer | 1.64e-19 | 24 |
simple columnar epithelium | 2.38e-17 | 11 |
digestive system | 1.27e-13 | 116 |
digestive tract | 1.27e-13 | 116 |
primitive gut | 1.27e-13 | 116 |
endoderm-derived structure | 2.62e-13 | 118 |
endoderm | 2.62e-13 | 118 |
presumptive endoderm | 2.62e-13 | 118 |
subdivision of digestive tract | 2.01e-11 | 114 |
trachea | 3.53e-09 | 3 |
respiratory airway | 3.53e-09 | 3 |
tracheobronchial tree | 3.53e-09 | 3 |
lower respiratory tract | 3.53e-09 | 3 |
gut-associated lymphoid tissue | 9.23e-07 | 2 |
mucosa-associated lymphoid tissue | 9.23e-07 | 2 |
lymphoid tissue | 9.23e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.