FFCP PHASE1:Mm9::chr14:35487392..35487418,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=218914|HGNC=|MCL_coexpression_id=3|UniProt=Q65Z40|association_with_transcript=84bp_to_ENSMUST00000169910_5end|description=CAGE_peak_5_at_Wapal_5end|id=chr14:35487392..35487418,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000838,7.28e-07,12;CL:0000791,9.06e-07,9;CL:0000789,9.06e-07,9;CL:0002420,9.06e-07,9;CL:0002419,9.06e-07,9;CL:0000790,9.06e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003929!4.98e-07!55;UBERON:0000490!8.10e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.48e-09,23;UBERON:0000974,1.48e-09,23;UBERON:0004807,1.48e-09,23;UBERON:0005058,1.48e-09,23;UBERON:0003351,1.48e-09,23;UBERON:0009113,1.48e-09,23;UBERON:0003295,1.48e-09,23;UBERON:0009722,1.48e-09,23;UBERON:0005562,1.48e-09,23;UBERON:0007690,1.48e-09,23;UBERON:0006562,6.66e-09,24;UBERON:0003408,6.66e-09,24;UBERON:0001557,6.66e-09,24;UBERON:0001042,6.66e-09,24;UBERON:0008814,6.66e-09,24;UBERON:0009145,6.66e-09,24;UBERON:0000490,1.16e-08,66;UBERON:0003929,8.11e-08,55;UBERON:0007811,1.49e-07,36;UBERON:0004177,2.84e-07,29;UBERON:0005057,2.84e-07,29;UBERON:0000072,2.94e-07,27;UBERON:0000077,6.04e-07,35|phase1_expression=2.08193501236232,1.04692622291808,1.36499771816861,2.41971369045464,1.00179145989269,2.01455126294268,1.16806320297763,3.87369970324729,11.1223090499817,11.2350972634557,0.513653904676515,1.11681022593471,2.22560948910567,2.53519167015092,0.999329285446988,1.01237633694913,0,0.946386496074713,0.411343300817216,0.84877930359606,1.53077922271926,1.68794617041505,0,0.95995453676044,0.91763712426868,2.8711598205751,0.430761996159075,1.72376986148711,0.190023419456374,1.00812051903972,0.443461021310609,1.27006134691926,0,0,0.577703239502549,0.498703936075477,0.612508068787107,23.8563029520037,14.8453715459522,7.85285615960697,26.4704169613956,18.442228093878,13.1087795318411,0,0.101376931219515,0,0,0,0.219686182734472,0,0,0,1.34226084846189,7.97898356212479,9.07453257684653,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0.191690942036473,0,1.10115880999389,0.510749352340751,0.46081959976873,0.395658863190582,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0.589257170947335,0.284743361598206,0.186399445825301,0.151452386666368,0.0755715601067855,1.15945795480671,0.860423876981386,1.3599426674155,1.61910957491345,0,0.448026887097336,1.12355536105401,0,0,0,1.26759077799012,1.28326477414318,0,0,0.216491041011214,0,0.505524445014783,1.25602267690966,1.29468941823586,0,0.867426633830679,0.304465478312141,0.230615497256059,0.60289056221049,1.17588707135705,0.502666365318702,1.73036477414062,0.289198713839823,0.884610551949874,0.970601099684455,0.220841518460394,1.45462575940567,0,0,0.83778682725382,0.766371165625774,4.19352935770721,3.59941638596045,3.43089613097275,0.299581278809645,0.457500602818626,0.502617408451458,0.173824320192276,0.255715457330331,0.20778804455956,0.648965052271031,0.611036183101898,0.746441823660558,1.0108910337347,0.210441855886474,0.390361328888111,0.689706313300419,0.720248519221397,1.05493372485001,1.15662048557257,0.512454881139399,0.562210347358373,2.32833033665114,0.431135985865684,0,0.351902248327898,0.657587197282725,0,1.0447564995665,0.205782136407943,0.59710280045548,0.702213187313235,4.63226232806487,1.42081749697796,0.207125772535502,0.703578179943289,1.08037236876609,0.23674473558521,0.983821158737019,0.154267112887378,0.232533944750408,0.268273401399619,0.467061369468678,0.822799249567402,0.32833492815819,0,0.438599962275997,0.219550115291051,0,0.210289948564127,1.13195073617213,0,1.05780226665418,0.853153002140936,0.464473343720877,0.515469845288373,0.605050573870028,1.11189021922435,0.570676878337677,0.949058123089023,0.329397909448022,0.502670417600539,2.58643413653496,0.38992817423824,0,0.432276099749388,0.199141273254367,0.379335801906163,1.14248512609729,0,1.83286195060783,1.35766741017338,1.82353131714828,0.948548056863859,0.738050739898011,0.470996183524124,0.740382983530803,1.1858105083486,0.166845105716094,0.589676985339609,0.674586337154561,0.811440485554012,0.72353147925725,1.2731292589071,1.43848068725405,0.972811360650212,0.823684239564244,0,0.372140947668503,0,1.01031551178845,0.717589654087649,1.92977408545347,0.369506380333209,0.37898282354097,0.488894929326078,0.339490171550376,0.704070744865506,0.502518772325447,0.476087281772027,0.780534591431195,1.10344600874334,1.32878813789265,0.478364305972461,0.327726629431476,0.690739927463582,0.578596234326046,0,1.63171705145613,0,1.10374698521893,0.160550589987792,0.35163505977661,0.163934945376675,0,0.631016438832513,0.780877488593277,0.861693590931196,0.477937595905104,1.55959071857676,0.849229592366497,1.21443210502468,0,1.97643888973262,0,2.41298144854057,0.35613120733451,0.651547837414304,0.164970122972535,0,1.21390318077491,0.604647113929502,1.13163047853539,0.295301892880773,1.84461088766356,1.29214146584111,2.1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| ||
|EntrezGene=218914 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q65Z40 | |||
|association_with_transcript=84bp_to_ENSMUST00000169910_5end | |||
|description=CAGE_peak_5_at_Wapal_5end | |||
|id=chr14:35487392..35487418,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.28e-07,12;CL:0000791,9.06e-07,9;CL:0000789,9.06e-07,9;CL:0002420,9.06e-07,9;CL:0002419,9.06e-07,9;CL:0000790,9.06e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003929!4.98e-07!55;UBERON:0000490!8.10e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.48e-09,23;UBERON:0000974,1.48e-09,23;UBERON:0004807,1.48e-09,23;UBERON:0005058,1.48e-09,23;UBERON:0003351,1.48e-09,23;UBERON:0009113,1.48e-09,23;UBERON:0003295,1.48e-09,23;UBERON:0009722,1.48e-09,23;UBERON:0005562,1.48e-09,23;UBERON:0007690,1.48e-09,23;UBERON:0006562,6.66e-09,24;UBERON:0003408,6.66e-09,24;UBERON:0001557,6.66e-09,24;UBERON:0001042,6.66e-09,24;UBERON:0008814,6.66e-09,24;UBERON:0009145,6.66e-09,24;UBERON:0000490,1.16e-08,66;UBERON:0003929,8.11e-08,55;UBERON:0007811,1.49e-07,36;UBERON:0004177,2.84e-07,29;UBERON:0005057,2.84e-07,29;UBERON:0000072,2.94e-07,27;UBERON:0000077,6.04e-07,35 | |||
|phase1_expression=2.08193501236232,1.04692622291808,1.36499771816861,2.41971369045464,1.00179145989269,2.01455126294268,1.16806320297763,3.87369970324729,11.1223090499817,11.2350972634557,0.513653904676515,1.11681022593471,2.22560948910567,2.53519167015092,0.999329285446988,1.01237633694913,0,0.946386496074713,0.411343300817216,0.84877930359606,1.53077922271926,1.68794617041505,0,0.95995453676044,0.91763712426868,2.8711598205751,0.430761996159075,1.72376986148711,0.190023419456374,1.00812051903972,0.443461021310609,1.27006134691926,0,0,0.577703239502549,0.498703936075477,0.612508068787107,23.8563029520037,14.8453715459522,7.85285615960697,26.4704169613956,18.442228093878,13.1087795318411,0,0.101376931219515,0,0,0,0.219686182734472,0,0,0,1.34226084846189,7.97898356212479,9.07453257684653,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0.191690942036473,0,1.10115880999389,0.510749352340751,0.46081959976873,0.395658863190582,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0.589257170947335,0.284743361598206,0.186399445825301,0.151452386666368,0.0755715601067855,1.15945795480671,0.860423876981386,1.3599426674155,1.61910957491345,0,0.448026887097336,1.12355536105401,0,0,0,1.26759077799012,1.28326477414318,0,0,0.216491041011214,0,0.505524445014783,1.25602267690966,1.29468941823586,0,0.867426633830679,0.304465478312141,0.230615497256059,0.60289056221049,1.17588707135705,0.502666365318702,1.73036477414062,0.289198713839823,0.884610551949874,0.970601099684455,0.220841518460394,1.45462575940567,0,0,0.83778682725382,0.766371165625774,4.19352935770721,3.59941638596045,3.43089613097275,0.299581278809645,0.457500602818626,0.502617408451458,0.173824320192276,0.255715457330331,0.20778804455956,0.648965052271031,0.611036183101898,0.746441823660558,1.0108910337347,0.210441855886474,0.390361328888111,0.689706313300419,0.720248519221397,1.05493372485001,1.15662048557257,0.512454881139399,0.562210347358373,2.32833033665114,0.431135985865684,0,0.351902248327898,0.657587197282725,0,1.0447564995665,0.205782136407943,0.59710280045548,0.702213187313235,4.63226232806487,1.42081749697796,0.207125772535502,0.703578179943289,1.08037236876609,0.23674473558521,0.983821158737019,0.154267112887378,0.232533944750408,0.268273401399619,0.467061369468678,0.822799249567402,0.32833492815819,0,0.438599962275997,0.219550115291051,0,0.210289948564127,1.13195073617213,0,1.05780226665418,0.853153002140936,0.464473343720877,0.515469845288373,0.605050573870028,1.11189021922435,0.570676878337677,0.949058123089023,0.329397909448022,0.502670417600539,2.58643413653496,0.38992817423824,0,0.432276099749388,0.199141273254367,0.379335801906163,1.14248512609729,0,1.83286195060783,1.35766741017338,1.82353131714828,0.948548056863859,0.738050739898011,0.470996183524124,0.740382983530803,1.1858105083486,0.166845105716094,0.589676985339609,0.674586337154561,0.811440485554012,0.72353147925725,1.2731292589071,1.43848068725405,0.972811360650212,0.823684239564244,0,0.372140947668503,0,1.01031551178845,0.717589654087649,1.92977408545347,0.369506380333209,0.37898282354097,0.488894929326078,0.339490171550376,0.704070744865506,0.502518772325447,0.476087281772027,0.780534591431195,1.10344600874334,1.32878813789265,0.478364305972461,0.327726629431476,0.690739927463582,0.578596234326046,0,1.63171705145613,0,1.10374698521893,0.160550589987792,0.35163505977661,0.163934945376675,0,0.631016438832513,0.780877488593277,0.861693590931196,0.477937595905104,1.55959071857676,0.849229592366497,1.21443210502468,0,1.97643888973262,0,2.41298144854057,0.35613120733451,0.651547837414304,0.164970122972535,0,1.21390318077491,0.604647113929502,1.13163047853539,0.295301892880773,1.84461088766356,1.29214146584111,2.18120237686503,1.06949213515416,0.948110273807448,1.05418608574999,2.06271086496374,1.02131881726136,0.540183282093931,0.129358683782755,0.643011105094777,3.19212420556092,0.713475270408282,0.987294123612726,0.913394847343798,0.469343416127421,1.27099242518292,1.10264199027481,0.32977250588296,0.807322133479528,0.482503399425247,0.238744688006273,0.984845398470368,1.1659233465194,0.18542530201051,0.683483523191411,0,0.555583582109135,0.376736914009382,0.546776910884101,1.60144721244566,5.77926661979108,7.83728133012485,5.2515990045681,0,0.316335993581135,0.609958401380546,0.756037385752609,0.627264888043406,0.218362563746178,0.674321731924103,1.1571483801547,0.523511883968059,0.388844919875379,0,2.81846469342095,0.598066184175915,0.66183396182839,0.583353565032143,0.516639293910924,0.168956125490778,1.64300134104056,1.8228613878153,1.67774951081137,1.93267296660805,3.16833006883652,2.52808896502543,0.608175645870493,0.308132871494482,1.29920822977795,1.79026695667481,2.18549490259391,1.56254084375959,2.65841148914239,2.01932899896295,1.600342939755,3.02478555410522,4.97035191772737,4.2333210321745,3.3894301632655,0,0.443971906748129,0.717710852875806,0.671538465456314,0.1931895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| |||
|short_description=p5@Wapal | |||
}} | |||
Revision as of 02:04, 13 September 2013
| Short description: | p5@Wapal |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Wapal_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3 |
| Association with transcript: | 84bp_to_ENSMUST00000169910_5end |
| EntrezGene: | Wapal |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphoid lineage restricted progenitor cell | 7.28e-07 | 12 |
| mature alpha-beta T cell | 9.06e-07 | 9 |
| alpha-beta T cell | 9.06e-07 | 9 |
| immature T cell | 9.06e-07 | 9 |
| mature T cell | 9.06e-07 | 9 |
| immature alpha-beta T cell | 9.06e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| thymus | 1.48e-09 | 23 |
| neck | 1.48e-09 | 23 |
| respiratory system epithelium | 1.48e-09 | 23 |
| hemolymphoid system gland | 1.48e-09 | 23 |
| pharyngeal epithelium | 1.48e-09 | 23 |
| thymic region | 1.48e-09 | 23 |
| pharyngeal gland | 1.48e-09 | 23 |
| entire pharyngeal arch endoderm | 1.48e-09 | 23 |
| thymus primordium | 1.48e-09 | 23 |
| early pharyngeal endoderm | 1.48e-09 | 23 |
| pharynx | 6.66e-09 | 24 |
| gland of gut | 6.66e-09 | 24 |
| upper respiratory tract | 6.66e-09 | 24 |
| chordate pharynx | 6.66e-09 | 24 |
| pharyngeal arch system | 6.66e-09 | 24 |
| pharyngeal region of foregut | 6.66e-09 | 24 |
| unilaminar epithelium | 1.16e-08 | 66 |
| gut epithelium | 8.11e-08 | 55 |
| craniocervical region | 1.49e-07 | 36 |
| hemopoietic organ | 2.84e-07 | 29 |
| immune organ | 2.84e-07 | 29 |
| segment of respiratory tract | 2.94e-07 | 27 |
| mixed endoderm/mesoderm-derived structure | 6.04e-07 | 35 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
