FFCP PHASE1:Hg19::chr4:1066403..1066404,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:1066403..1066404,-|id=chr4:1066403..1066404,-|ontology_enrichment_celltype=CL:0002150!2.69e-07!3;CL:0000861!2.69e-07!3|ontology_enrichment_celltype_v019=CL:0000123;4.66e-34;2!CL:0000242;4.66e-34;2!CL:0000312;2.85e-14;5!CL:0000240;4.68e-12;6!CL:0000311;4.68e-12;6!CL:0000079;4.68e-12;6!CL:0000237;4.68e-12;6!CL:0002535;7.98e-10;2!CL:1000415;9.06e-10;2!CL:0000362;2.42e-08;9!CL:0000746;7.08e-07;3!CL:0000322;9.11e-07;3|ontology_enrichment_celltype_v019_2=CL:0000242,3.06e-34,2;CL:0000312,2.41e-14,5;CL:0000240,4.07e-12,6;CL:0000311,4.07e-12,6;CL:0000079,4.07e-12,6;CL:0000237,4.07e-12,6;CL:0000036,4.07e-12,6;CL:0000357,4.07e-12,6;CL:0000114,4.07e-12,6;CL:0002535,7.98e-10,2;CL:1000415,9.46e-10,2;CL:0000362,2.20e-08,9;CL:0000746,6.88e-07,3;CL:0000513,6.88e-07,3;CL:0000322,7.70e-07,3|ontology_enrichment_development_v019=CL:0000357;4.68e-12;6!CL:0000114;4.68e-12;6!UBERON:0009117;1.67e-07;10!UBERON:0005564;1.67e-07;10!CL:0000513;7.08e-07;3|ontology_enrichment_disease=DOID:3908!9.88e-07!5|ontology_enrichment_disease_v019=DOID:3111;1.03e-17;1!DOID:3603;1.03e-17;1!DOID:3910;1.57e-09;2|ontology_enrichment_disease_v019_2=DOID:3111,1.03e-17,1;DOID:3603,1.03e-17,1;DOID:3910,1.22e-09,2;DOID:305,2.78e-07,106;DOID:0050687,7.40e-07,143|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0006955;7.98e-10;2!UBERON:0004801;7.98e-10;2!UBERON:0004903;1.57e-09;2!UBERON:0002173;1.57e-09;2!UBERON:0002186;1.57e-09;2!UBERON:0002110;6.32e-07;3!UBERON:0004821;9.11e-07;3!UBERON:0007499;9.11e-07;3!UBERON:0003215;9.11e-07;3!UBERON:0010368;9.11e-07;3!UBERON:0009911;9.11e-07;3!UBERON:0002299;9.11e-07;3!UBERON:0006524;9.11e-07;3!UBERON:0008874;9.11e-07;3!UBERON:0002169;9.11e-07;3!UBERON:0004894;9.11e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0006955,7.98e-10,2;UBERON:0004801,7.98e-10,2;UBERON:0004903,1.22e-09,2;UBERON:0002173,1.22e-09,2;UBERON:0002186,1.22e-09,2;UBERON:0002110,6.50e-07,3;UBERON:0006242,6.50e-07,3;UBERON:0004821,7.70e-07,3;UBERON:0003215,7.70e-07,3;UBERON:0010368,7.70e-07,3;UBERON:0009911,7.70e-07,3;UBERON:0002299,7.70e-07,3;UBERON:0006524,7.70e-07,3;UBERON:0008874,7.70e-07,3;UBERON:0002169,7.70e-07,3;UBERON:0004894,7.70e-07,3|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.243947412259191,0.397589304964456,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.231046011313244,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.956557636372934,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,5.54252045279407,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,1.77977555204936,0,2.06846023944879,1.45802306691627,0,0,0,0,0.221158519862449,0,0,0,0,0.230850775511391,0,0.23056390438806,0,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0,0.293977192243133,0.522355239482415,0,0,0.387025325156341,0.65780385377567,0.574808199372465,0,0,0.225980740780532,0,0,0.0633107959558787,3.51992488922645,0,0,0.599428828746391,0,0,0,0,0.49701014226173,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0.104909176269996,0.105600336519406,0.179287339332845,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.705797459094515,3.74667924645505,1.5941313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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:1066403..1066404,- | |||
|id=chr4:1066403..1066404,- | |||
|ontology_enrichment_celltype=CL:0002150!2.69e-07!3;CL:0000861!2.69e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.66e-34;2!CL:0000242;4.66e-34;2!CL:0000312;2.85e-14;5!CL:0000240;4.68e-12;6!CL:0000311;4.68e-12;6!CL:0000079;4.68e-12;6!CL:0000237;4.68e-12;6!CL:0002535;7.98e-10;2!CL:1000415;9.06e-10;2!CL:0000362;2.42e-08;9!CL:0000746;7.08e-07;3!CL:0000322;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.06e-34,2;CL:0000312,2.41e-14,5;CL:0000240,4.07e-12,6;CL:0000311,4.07e-12,6;CL:0000079,4.07e-12,6;CL:0000237,4.07e-12,6;CL:0000036,4.07e-12,6;CL:0000357,4.07e-12,6;CL:0000114,4.07e-12,6;CL:0002535,7.98e-10,2;CL:1000415,9.46e-10,2;CL:0000362,2.20e-08,9;CL:0000746,6.88e-07,3;CL:0000513,6.88e-07,3;CL:0000322,7.70e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;4.68e-12;6!CL:0000114;4.68e-12;6!UBERON:0009117;1.67e-07;10!UBERON:0005564;1.67e-07;10!CL:0000513;7.08e-07;3 | |||
|ontology_enrichment_disease=DOID:3908!9.88e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:3111;1.03e-17;1!DOID:3603;1.03e-17;1!DOID:3910;1.57e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.03e-17,1;DOID:3603,1.03e-17,1;DOID:3910,1.22e-09,2;DOID:305,2.78e-07,106;DOID:0050687,7.40e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;7.98e-10;2!UBERON:0004801;7.98e-10;2!UBERON:0004903;1.57e-09;2!UBERON:0002173;1.57e-09;2!UBERON:0002186;1.57e-09;2!UBERON:0002110;6.32e-07;3!UBERON:0004821;9.11e-07;3!UBERON:0007499;9.11e-07;3!UBERON:0003215;9.11e-07;3!UBERON:0010368;9.11e-07;3!UBERON:0009911;9.11e-07;3!UBERON:0002299;9.11e-07;3!UBERON:0006524;9.11e-07;3!UBERON:0008874;9.11e-07;3!UBERON:0002169;9.11e-07;3!UBERON:0004894;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,7.98e-10,2;UBERON:0004801,7.98e-10,2;UBERON:0004903,1.22e-09,2;UBERON:0002173,1.22e-09,2;UBERON:0002186,1.22e-09,2;UBERON:0002110,6.50e-07,3;UBERON:0006242,6.50e-07,3;UBERON:0004821,7.70e-07,3;UBERON:0003215,7.70e-07,3;UBERON:0010368,7.70e-07,3;UBERON:0009911,7.70e-07,3;UBERON:0002299,7.70e-07,3;UBERON:0006524,7.70e-07,3;UBERON:0008874,7.70e-07,3;UBERON:0002169,7.70e-07,3;UBERON:0004894,7.70e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.243947412259191,0.397589304964456,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.231046011313244,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.956557636372934,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,5.54252045279407,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,1.77977555204936,0,2.06846023944879,1.45802306691627,0,0,0,0,0.221158519862449,0,0,0,0,0.230850775511391,0,0.23056390438806,0,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0,0.293977192243133,0.522355239482415,0,0,0.387025325156341,0.65780385377567,0.574808199372465,0,0,0.225980740780532,0,0,0.0633107959558787,3.51992488922645,0,0,0.599428828746391,0,0,0,0,0.49701014226173,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0.104909176269996,0.105600336519406,0.179287339332845,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.705797459094515,3.74667924645505,1.59413131471908,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0,0,1.22368352253234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0.354581522651905,0,0,0,0,0,0,0,0,0,0.116241425368125,0.695433089210318,0,0,0,0,0,0.709992004383392,0.426067023795788,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.951360726220549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,1.25353769646188,0.151557396436479,0.267964130156178,0,0,0.213233981900981,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:1066403..1066404,- | |||
}} |
Revision as of 01:56, 13 September 2013
Short description: | p@chr4:1066403..1066404, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:1066403..1066404, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.06e-34 | 2 |
keratinocyte | 2.41e-14 | 5 |
stratified squamous epithelial cell | 4.07e-12 | 6 |
keratin accumulating cell | 4.07e-12 | 6 |
stratified epithelial cell | 4.07e-12 | 6 |
keratinizing barrier epithelial cell | 4.07e-12 | 6 |
epithelial fate stem cell | 4.07e-12 | 6 |
stratified epithelial stem cell | 4.07e-12 | 6 |
surface ectodermal cell | 4.07e-12 | 6 |
epithelial cell of cervix | 7.98e-10 | 2 |
epithelial cell of gall bladder | 9.46e-10 | 2 |
epidermal cell | 2.20e-08 | 9 |
cardiac muscle cell | 6.88e-07 | 3 |
cardiac muscle myoblast | 6.88e-07 | 3 |
pneumocyte | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 7.98e-10 | 2 |
cervix epithelium | 7.98e-10 | 2 |
bronchoalveolar duct junction | 1.22e-09 | 2 |
alveolar duct | 1.22e-09 | 2 |
bronchiole | 1.22e-09 | 2 |
gallbladder | 6.50e-07 | 3 |
gall bladder primordium | 6.50e-07 | 3 |
pulmonary alveolus epithelium | 7.70e-07 | 3 |
alveolus | 7.70e-07 | 3 |
pulmonary lobule | 7.70e-07 | 3 |
lobule | 7.70e-07 | 3 |
alveolus of lung | 7.70e-07 | 3 |
alveolar system | 7.70e-07 | 3 |
pulmonary acinus | 7.70e-07 | 3 |
alveolar sac | 7.70e-07 | 3 |
alveolar wall | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.03e-17 | 1 |
mucinous cystadenocarcinoma | 1.03e-17 | 1 |
lung adenocarcinoma | 1.22e-09 | 2 |
carcinoma | 2.78e-07 | 106 |
cell type cancer | 7.40e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.