FFCP PHASE1:Mm9::chr14:26286217..26286232,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:26286217..26286232,+|id=chr14:26286217..26286232,+|ontology_enrichment_celltype=CL:0000239!1.96e-20!6;CL:0000677!1.96e-20!6;CL:0000212!1.96e-20!6;CL:0000584!1.96e-20!6;CL:0000075!1.68e-17!7;CL:0002563!1.39e-13!9;CL:0002251!1.39e-13!9;CL:0000066!1.55e-11!25;CL:0000223!2.05e-08!20;CL:0002076!4.50e-08!15;CL:0000473!2.53e-07!3;CL:0000627!2.53e-07!3;CL:0000682!2.53e-07!3|ontology_enrichment_celltype_v019_2=CL:0000239,6.34e-47,6;CL:0000677,6.34e-47,6;CL:0000584,6.34e-47,6;CL:0000075,2.31e-40,7;CL:0002563,1.33e-31,9;CL:0002251,1.33e-31,9;CL:0002076,2.63e-19,15;CL:0000066,5.10e-18,25;CL:0000223,1.13e-14,20;CL:0000682,5.46e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.29e-19!15;UBERON:0001242!1.77e-17!13;UBERON:0000060!1.77e-17!13;UBERON:0001262!1.77e-17!13;UBERON:0004786!1.77e-17!13;UBERON:0003350!1.39e-13!9;UBERON:0004808!1.39e-13!9;UBERON:0001277!1.39e-13!9;UBERON:0004923!6.81e-12!24;UBERON:0000485!4.41e-11!11;UBERON:0000160!1.32e-09!43;UBERON:0005409!5.29e-08!59;UBERON:0000331!5.15e-07!3;UBERON:0002116!5.15e-07!3;UBERON:0001204!5.15e-07!3;UBERON:0001168!5.15e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.33e-31,9;UBERON:0004808,1.33e-31,9;UBERON:0001277,1.33e-31,9;UBERON:0000485,5.07e-26,11;UBERON:0001242,3.77e-22,13;UBERON:0001262,3.77e-22,13;UBERON:0004786,3.77e-22,13;UBERON:0000344,2.63e-19,15;UBERON:0004923,2.40e-12,24;UBERON:0000160,1.04e-09,31|phase1_expression=0,1.74487703819681,1.36499771816861,7.25914107136392,4.00716583957078,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0,1.14846392823004,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:26286217..26286232,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:26286217..26286232,+ | |||
|id=chr14:26286217..26286232,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.96e-20!6;CL:0000677!1.96e-20!6;CL:0000212!1.96e-20!6;CL:0000584!1.96e-20!6;CL:0000075!1.68e-17!7;CL:0002563!1.39e-13!9;CL:0002251!1.39e-13!9;CL:0000066!1.55e-11!25;CL:0000223!2.05e-08!20;CL:0002076!4.50e-08!15;CL:0000473!2.53e-07!3;CL:0000627!2.53e-07!3;CL:0000682!2.53e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.34e-47,6;CL:0000677,6.34e-47,6;CL:0000584,6.34e-47,6;CL:0000075,2.31e-40,7;CL:0002563,1.33e-31,9;CL:0002251,1.33e-31,9;CL:0002076,2.63e-19,15;CL:0000066,5.10e-18,25;CL:0000223,1.13e-14,20;CL:0000682,5.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.29e-19!15;UBERON:0001242!1.77e-17!13;UBERON:0000060!1.77e-17!13;UBERON:0001262!1.77e-17!13;UBERON:0004786!1.77e-17!13;UBERON:0003350!1.39e-13!9;UBERON:0004808!1.39e-13!9;UBERON:0001277!1.39e-13!9;UBERON:0004923!6.81e-12!24;UBERON:0000485!4.41e-11!11;UBERON:0000160!1.32e-09!43;UBERON:0005409!5.29e-08!59;UBERON:0000331!5.15e-07!3;UBERON:0002116!5.15e-07!3;UBERON:0001204!5.15e-07!3;UBERON:0001168!5.15e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.33e-31,9;UBERON:0004808,1.33e-31,9;UBERON:0001277,1.33e-31,9;UBERON:0000485,5.07e-26,11;UBERON:0001242,3.77e-22,13;UBERON:0001262,3.77e-22,13;UBERON:0004786,3.77e-22,13;UBERON:0000344,2.63e-19,15;UBERON:0004923,2.40e-12,24;UBERON:0000160,1.04e-09,31 | |||
|phase1_expression=0,1.74487703819681,1.36499771816861,7.25914107136392,4.00716583957078,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0,1.14846392823004,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:26286217..26286232,+ | |||
}} |
Revision as of 01:50, 13 September 2013
Short description: | p@chr14:26286217..26286232, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:26286217..26286232, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.34e-47 | 6 |
gut absorptive cell | 6.34e-47 | 6 |
enterocyte | 6.34e-47 | 6 |
columnar/cuboidal epithelial cell | 2.31e-40 | 7 |
intestinal epithelial cell | 1.33e-31 | 9 |
epithelial cell of alimentary canal | 1.33e-31 | 9 |
endo-epithelial cell | 2.63e-19 | 15 |
epithelial cell | 5.10e-18 | 25 |
endodermal cell | 1.13e-14 | 20 |
M cell of gut | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.33e-31 | 9 |
gastrointestinal system epithelium | 1.33e-31 | 9 |
intestinal epithelium | 1.33e-31 | 9 |
simple columnar epithelium | 5.07e-26 | 11 |
intestinal mucosa | 3.77e-22 | 13 |
wall of intestine | 3.77e-22 | 13 |
gastrointestinal system mucosa | 3.77e-22 | 13 |
mucosa | 2.63e-19 | 15 |
organ component layer | 2.40e-12 | 24 |
intestine | 1.04e-09 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.