FFCP PHASE1:Hg19::chr3:55521611..55521652,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7474|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12784|TSSclassifier=S|UniProt=F5H611|association_with_transcript=17bp_to_ENST00000536765_5end|coexpression_cluster_id=C1080|description=CAGE_peak_8_at_WNT5A_5end|id=chr3:55521611..55521652,-|ontology_enrichment_celltype=CL:0000055!9.24e-17!180;CL:0000057!9.51e-09!75;CL:0002620!6.35e-07!23;CL:0000680!7.14e-07!57;CL:0000056!7.14e-07!57;CL:0000355!7.14e-07!57|ontology_enrichment_celltype_v019=CL:0000349;6.03e-11;19!CL:0000134;1.09e-09;55!CL:0000723;1.45e-09;61!CL:0000048;8.99e-09;58!CL:0002537;2.18e-08;5!CL:0002620;2.25e-07;23|ontology_enrichment_celltype_v019_2=CL:0000349,6.46e-11,19;CL:0000057,2.92e-10,76;CL:0002537,2.82e-08,5;CL:0002620,1.82e-07,23;CL:0000048,2.23e-07,427;CL:0000723,5.68e-07,433|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;1.36e-09;14!DOID:17;1.62e-08;5!DOID:450;1.62e-08;5!DOID:66;1.62e-08;5!DOID:423;1.62e-08;5!DOID:0080000;1.62e-08;5!DOID:11722;1.62e-08;5|ontology_enrichment_disease_v019_2=DOID:2394,8.60e-10,14;DOID:17,1.59e-08,5;DOID:450,1.59e-08,5;DOID:66,1.59e-08,5;DOID:423,1.59e-08,5;DOID:0080000,1.59e-08,5;DOID:11722,1.59e-08,5|ontology_enrichment_uberon=UBERON:0000478!1.41e-08!24;UBERON:0000475!4.50e-08!365;UBERON:0005631!6.88e-08!14;UBERON:0000158!6.88e-08!14;UBERON:0000914!8.60e-08!83;UBERON:0002329!8.60e-08!83;UBERON:0003077!8.60e-08!83;UBERON:0003059!8.60e-08!83;UBERON:0007282!8.60e-08!83;UBERON:0009618!8.60e-08!83;UBERON:0007285!8.60e-08!83;UBERON:0003102!1.73e-07!95|ontology_enrichment_uberon_v019=UBERON:0000305;2.87e-11;7!UBERON:0005631;8.35e-10;10!UBERON:0000158;8.35e-10;10!UBERON:0000478;3.55e-09;24!UBERON:0001801;1.12e-07;14!UBERON:0002203;4.75e-07;6!UBERON:0001768;4.75e-07;6!UBERON:0002200;4.75e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0000305,3.67e-11,7;UBERON:0005631,7.18e-10,14;UBERON:0000158,7.18e-10,14;UBERON:0004871,1.44e-09,8;UBERON:0003102,4.42e-09,99;UBERON:0000478,4.54e-09,24;UBERON:0002199,6.73e-09,46;UBERON:0002416,6.73e-09,46;UBERON:0001801,1.02e-07,14;UBERON:0002097,1.95e-07,41;UBERON:0002203,3.45e-07,6;UBERON:0001768,3.45e-07,6;UBERON:0002200,3.45e-07,6|phase1_expression=1.09007027562334,0.856402095563933,0.422863212287913,0,1.34088328328186,2.61701557230111,0,2.52687949370732,0,0.737201809504527,0,3.49506195408276,8.17677632508206,0.495065411840187,0.331397375727916,0,2.41077811209591,1.46062018077475,1.95173119516203,1.23121058076788,0.816002764977012,0.626909442956176,0.286235987131057,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0.641858054152187,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,4.69870898099936,5.0133791063589,2.17269778441236,6.36228757640879,1.45990461090791,1.41802225746102,1.33037638477538,1.75669571386252,0,0,0,1.9472843619281,2.08955684759121,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.794455084879313,0,0,0,1.06748995729705,0.74000264525148,0,0.404132016209064,0.163461903113459,0.151357427644931,1.72852777344,0,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,1.22492502752936,0,0.516628905878827,13.0680314301026,19.534087413006,0,4.31170885089743,0,0.250237039743928,0,1.31693286264251,6.12975591598039,10.817140241275,0.113432183160021,2.15267562826634,6.40672166455702,4.66250182551036,3.60109315301283,4.63736381572975,3.09168648054755,4.09457083929498,0.843881661206331,0.68205903612839,4.29137416214995,7.54809168866855,0.646584227275248,3.19508633264953,1.71278566986988,0.847802961552438,0.386521706326594,0.545492241181669,0.286804595389004,0,0,0.116193942869518,0,0.252320850875628,0,6.25798129319264,0,1.38134921352481,1.39310378409594,1.44375896333917,0.354920400119532,0.674338760312407,0.241011029883482,0.772057809126758,0.217879444092406,0.474541238222193,0.539325232640658,0.784885860501384,1.15424147083917,0,0,0,0,0,0,0,0,0.245976877086227,1.71567810298526,0,0,0,0.0925884451585296,1.3032332212413,2.07986957055916,2.88662684050547,0.463721619900307,3.40485213283883,0,0,0,0,0,0,0,0,0.93733833986777,2.35174979478403,0.992425680696705,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.308482478109971,0,0,0.112131084345361,1.30788020649984,0.07333828582095,1.03417372606222,0,1.690605505112,7.1803291477915,3.12022310734098,1.54324424557285,0,0.266422179016099,1.28680194292333,1.62786481617433,0.823240336780769,1.30294473717494,0.710783897485092,2.37585561880029,6.63166629531089,0.871533458600294,3.499054691372,0,0,0,0.479249710983165,0,1.42636905040718,1.88215698667853,1.02738161275192,4.1184021545176,0,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,0.335032530668698,0,0,0,0,0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1649,0.808468755832877,0.653150243690884,0,0.673520530145875,0.286888821570705,0.665320713092027,0.651226148887796,0,0,0,0,0.488965776731466,0.406896178315738,0,0,0|short_description=p8@WNT5A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7474 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12784 | |||
|TSSclassifier=S | |||
|UniProt=F5H611 | |||
|association_with_transcript=17bp_to_ENST00000536765_5end | |||
|coexpression_cluster_id=C1080 | |||
|description=CAGE_peak_8_at_WNT5A_5end | |||
|id=chr3:55521611..55521652,- | |||
|ontology_enrichment_celltype=CL:0000055!9.24e-17!180;CL:0000057!9.51e-09!75;CL:0002620!6.35e-07!23;CL:0000680!7.14e-07!57;CL:0000056!7.14e-07!57;CL:0000355!7.14e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.03e-11;19!CL:0000134;1.09e-09;55!CL:0000723;1.45e-09;61!CL:0000048;8.99e-09;58!CL:0002537;2.18e-08;5!CL:0002620;2.25e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.46e-11,19;CL:0000057,2.92e-10,76;CL:0002537,2.82e-08,5;CL:0002620,1.82e-07,23;CL:0000048,2.23e-07,427;CL:0000723,5.68e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.36e-09;14!DOID:17;1.62e-08;5!DOID:450;1.62e-08;5!DOID:66;1.62e-08;5!DOID:423;1.62e-08;5!DOID:0080000;1.62e-08;5!DOID:11722;1.62e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.60e-10,14;DOID:17,1.59e-08,5;DOID:450,1.59e-08,5;DOID:66,1.59e-08,5;DOID:423,1.59e-08,5;DOID:0080000,1.59e-08,5;DOID:11722,1.59e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000478!1.41e-08!24;UBERON:0000475!4.50e-08!365;UBERON:0005631!6.88e-08!14;UBERON:0000158!6.88e-08!14;UBERON:0000914!8.60e-08!83;UBERON:0002329!8.60e-08!83;UBERON:0003077!8.60e-08!83;UBERON:0003059!8.60e-08!83;UBERON:0007282!8.60e-08!83;UBERON:0009618!8.60e-08!83;UBERON:0007285!8.60e-08!83;UBERON:0003102!1.73e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;2.87e-11;7!UBERON:0005631;8.35e-10;10!UBERON:0000158;8.35e-10;10!UBERON:0000478;3.55e-09;24!UBERON:0001801;1.12e-07;14!UBERON:0002203;4.75e-07;6!UBERON:0001768;4.75e-07;6!UBERON:0002200;4.75e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,3.67e-11,7;UBERON:0005631,7.18e-10,14;UBERON:0000158,7.18e-10,14;UBERON:0004871,1.44e-09,8;UBERON:0003102,4.42e-09,99;UBERON:0000478,4.54e-09,24;UBERON:0002199,6.73e-09,46;UBERON:0002416,6.73e-09,46;UBERON:0001801,1.02e-07,14;UBERON:0002097,1.95e-07,41;UBERON:0002203,3.45e-07,6;UBERON:0001768,3.45e-07,6;UBERON:0002200,3.45e-07,6 | |||
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| |||
|short_description=p8@WNT5A | |||
}} |
Revision as of 00:56, 13 September 2013
Short description: | p8@WNT5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_WNT5A_5end |
Coexpression cluster: | C1080_Fibroblast_mesenchymal_neuroectodermal_Hair_Mesenchymal_Smooth_alveolar |
Association with transcript: | 17bp_to_ENST00000536765_5end |
EntrezGene: | WNT5A |
HGNC: | 12784 |
UniProt: | F5H611 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.46e-11 | 19 |
fibroblast | 2.92e-10 | 76 |
amnion mesenchymal stem cell | 2.82e-08 | 5 |
skin fibroblast | 1.82e-07 | 23 |
multi fate stem cell | 2.23e-07 | 427 |
somatic stem cell | 5.68e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
amnion | 3.67e-11 | 7 |
extraembryonic membrane | 7.18e-10 | 14 |
membranous layer | 7.18e-10 | 14 |
somatic layer of lateral plate mesoderm | 1.44e-09 | 8 |
surface structure | 4.42e-09 | 99 |
extraembryonic structure | 4.54e-09 | 24 |
integument | 6.73e-09 | 46 |
integumental system | 6.73e-09 | 46 |
anterior segment of eyeball | 1.02e-07 | 14 |
skin of body | 1.95e-07 | 41 |
vasculature of eye | 3.45e-07 | 6 |
uvea | 3.45e-07 | 6 |
vasculature of head | 3.45e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.60e-10 | 14 |
musculoskeletal system disease | 1.59e-08 | 5 |
myotonic disease | 1.59e-08 | 5 |
muscle tissue disease | 1.59e-08 | 5 |
myopathy | 1.59e-08 | 5 |
muscular disease | 1.59e-08 | 5 |
myotonic dystrophy | 1.59e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.