FFCP PHASE1:Hg19::chr3:52860010..52860020,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3700|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=6169|TSSclassifier=S|UniProt=|association_with_transcript=-16bp_to_uc011bel.1_5end|coexpression_cluster_id=C5|description=CAGE_peak_5_at_ITIH4_5end|id=chr3:52860010..52860020,-|ontology_enrichment_celltype=CL:0000181!1.54e-22!12;CL:0000417!1.54e-22!12;CL:0000668!1.54e-22!12;CL:0000414!1.54e-22!12;CL:0000412!1.54e-22!12;CL:0000182!1.54e-22!12|ontology_enrichment_celltype_v019=CL:0000182;4.92e-22;12|ontology_enrichment_celltype_v019_2=CL:0000182,4.75e-22,12|ontology_enrichment_development_v019=UBERON:0004161;2.76e-11;11!UBERON:0009497;1.06e-09;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.51e-31!19;UBERON:0006925!2.51e-31!19;UBERON:0008836!2.51e-31!19;UBERON:0008835!4.70e-27!22;UBERON:0003894!4.70e-27!22;UBERON:0009854!7.07e-26!23;UBERON:0007499!8.37e-24!25;UBERON:0009497!8.37e-24!25;UBERON:0000015!8.37e-24!25;UBERON:0002423!8.37e-24!25;UBERON:0006235!8.37e-24!25;UBERON:0004161!8.37e-24!25;UBERON:0005057!6.92e-23!26;UBERON:0009856!6.92e-23!26;UBERON:0002365!3.50e-19!31;UBERON:0002330!3.50e-19!31;UBERON:0002368!5.60e-17!35;UBERON:0000949!3.57e-13!45;UBERON:0003929!6.02e-11!54;UBERON:0005172!9.60e-11!55;UBERON:0005173!9.60e-11!55;UBERON:0002530!5.31e-10!59;UBERON:0002417!1.15e-09!61;UBERON:0000916!1.15e-09!61;UBERON:0005911!1.46e-09!82;UBERON:0001041!6.31e-08!98;UBERON:0005177!3.22e-07!107;UBERON:0009569!8.27e-07!113|ontology_enrichment_uberon_v019=UBERON:0002107;1.77e-37;19!UBERON:0006925;1.77e-37;19!UBERON:0002423;1.27e-28;25!UBERON:0002365;4.10e-23;31!UBERON:0002330;4.10e-23;31!UBERON:0002368;5.66e-20;33!UBERON:0000949;1.75e-14;43!UBERON:0005172;1.93e-10;52!UBERON:0005173;1.93e-10;52!UBERON:0002417;4.45e-08;58!UBERON:0000916;4.45e-08;58!UBERON:0002530;1.29e-07;57!UBERON:0001007;1.71e-07;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.77e-37,19;UBERON:0006925,1.77e-37,19;UBERON:0008836,1.77e-37,19;UBERON:0008835,1.90e-32,22;UBERON:0003894,1.90e-32,22;UBERON:0009854,4.62e-31,23;UBERON:0007499,1.27e-28,25;UBERON:0009497,1.27e-28,25;UBERON:0000015,1.27e-28,25;UBERON:0002423,1.27e-28,25;UBERON:0006235,1.27e-28,25;UBERON:0004161,1.27e-28,25;UBERON:0009856,1.53e-27,26;UBERON:0002365,3.50e-23,31;UBERON:0002330,3.50e-23,31;UBERON:0002368,1.37e-20,35;UBERON:0000949,4.12e-16,45;UBERON:0003929,1.72e-13,54;UBERON:0005172,1.72e-13,54;UBERON:0005173,1.72e-13,54;UBERON:0002530,2.23e-12,59;UBERON:0002417,3.53e-12,60;UBERON:0000916,3.53e-12,60;UBERON:0005911,5.41e-09,82;UBERON:0001041,1.72e-08,87;UBERON:0005177,2.40e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,5.89696330006576,8.27105869353966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71553711344522,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@ITIH4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3700 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6169 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-16bp_to_uc011bel.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_ITIH4_5end | |||
|id=chr3:52860010..52860020,- | |||
|ontology_enrichment_celltype=CL:0000181!1.54e-22!12;CL:0000417!1.54e-22!12;CL:0000668!1.54e-22!12;CL:0000414!1.54e-22!12;CL:0000412!1.54e-22!12;CL:0000182!1.54e-22!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.92e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.75e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.76e-11;11!UBERON:0009497;1.06e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.51e-31!19;UBERON:0006925!2.51e-31!19;UBERON:0008836!2.51e-31!19;UBERON:0008835!4.70e-27!22;UBERON:0003894!4.70e-27!22;UBERON:0009854!7.07e-26!23;UBERON:0007499!8.37e-24!25;UBERON:0009497!8.37e-24!25;UBERON:0000015!8.37e-24!25;UBERON:0002423!8.37e-24!25;UBERON:0006235!8.37e-24!25;UBERON:0004161!8.37e-24!25;UBERON:0005057!6.92e-23!26;UBERON:0009856!6.92e-23!26;UBERON:0002365!3.50e-19!31;UBERON:0002330!3.50e-19!31;UBERON:0002368!5.60e-17!35;UBERON:0000949!3.57e-13!45;UBERON:0003929!6.02e-11!54;UBERON:0005172!9.60e-11!55;UBERON:0005173!9.60e-11!55;UBERON:0002530!5.31e-10!59;UBERON:0002417!1.15e-09!61;UBERON:0000916!1.15e-09!61;UBERON:0005911!1.46e-09!82;UBERON:0001041!6.31e-08!98;UBERON:0005177!3.22e-07!107;UBERON:0009569!8.27e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.77e-37;19!UBERON:0006925;1.77e-37;19!UBERON:0002423;1.27e-28;25!UBERON:0002365;4.10e-23;31!UBERON:0002330;4.10e-23;31!UBERON:0002368;5.66e-20;33!UBERON:0000949;1.75e-14;43!UBERON:0005172;1.93e-10;52!UBERON:0005173;1.93e-10;52!UBERON:0002417;4.45e-08;58!UBERON:0000916;4.45e-08;58!UBERON:0002530;1.29e-07;57!UBERON:0001007;1.71e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.77e-37,19;UBERON:0006925,1.77e-37,19;UBERON:0008836,1.77e-37,19;UBERON:0008835,1.90e-32,22;UBERON:0003894,1.90e-32,22;UBERON:0009854,4.62e-31,23;UBERON:0007499,1.27e-28,25;UBERON:0009497,1.27e-28,25;UBERON:0000015,1.27e-28,25;UBERON:0002423,1.27e-28,25;UBERON:0006235,1.27e-28,25;UBERON:0004161,1.27e-28,25;UBERON:0009856,1.53e-27,26;UBERON:0002365,3.50e-23,31;UBERON:0002330,3.50e-23,31;UBERON:0002368,1.37e-20,35;UBERON:0000949,4.12e-16,45;UBERON:0003929,1.72e-13,54;UBERON:0005172,1.72e-13,54;UBERON:0005173,1.72e-13,54;UBERON:0002530,2.23e-12,59;UBERON:0002417,3.53e-12,60;UBERON:0000916,3.53e-12,60;UBERON:0005911,5.41e-09,82;UBERON:0001041,1.72e-08,87;UBERON:0005177,2.40e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,5.89696330006576,8.27105869353966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71553711344522,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@ITIH4 | |||
}} |
Revision as of 00:52, 13 September 2013
Short description: | p5@ITIH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ITIH4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -16bp_to_uc011bel.1_5end |
EntrezGene: | ITIH4 |
HGNC: | 6169 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.75e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.77e-37 | 19 |
digestive gland | 1.77e-37 | 19 |
liver bud | 1.77e-37 | 19 |
hepatic diverticulum | 1.90e-32 | 22 |
liver primordium | 1.90e-32 | 22 |
digestive tract diverticulum | 4.62e-31 | 23 |
epithelial sac | 1.27e-28 | 25 |
epithelium of foregut-midgut junction | 1.27e-28 | 25 |
anatomical boundary | 1.27e-28 | 25 |
hepatobiliary system | 1.27e-28 | 25 |
foregut-midgut junction | 1.27e-28 | 25 |
septum transversum | 1.27e-28 | 25 |
sac | 1.53e-27 | 26 |
exocrine gland | 3.50e-23 | 31 |
exocrine system | 3.50e-23 | 31 |
endocrine gland | 1.37e-20 | 35 |
endocrine system | 4.12e-16 | 45 |
gut epithelium | 1.72e-13 | 54 |
abdomen element | 1.72e-13 | 54 |
abdominal segment element | 1.72e-13 | 54 |
gland | 2.23e-12 | 59 |
abdominal segment of trunk | 3.53e-12 | 60 |
abdomen | 3.53e-12 | 60 |
endo-epithelium | 5.41e-09 | 82 |
foregut | 1.72e-08 | 87 |
trunk region element | 2.40e-07 | 101 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.