FFCP PHASE1:Hg19::chr3:47620323..47620366,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10675 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2467 | |||
|TSSclassifier=S | |||
|UniProt=O95196 | |||
|association_with_transcript=0bp_to_NM_001206943,NM_001206944,NM_006574,uc003cro.3,uc003crp.3_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_CSPG5_5end | |||
|id=chr3:47620323..47620366,- | |||
|ontology_enrichment_celltype=CL:0002319!9.30e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.18e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.16e-09,8;CL:0002319,9.84e-09,25;CL:0000540,9.74e-07,6;CL:0000031,9.74e-07,6;CL:0000404,9.74e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.94e-16;82!UBERON:0006238;2.59e-07;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.22e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@CSPG5 | |||
}} |
Revision as of 00:25, 13 September 2013
Short description: | p1@CSPG5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CSPG5_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_001206943, NM_001206944, NM_006574, uc003cro.3, uc003crp.3_5end |
EntrezGene: | CSPG5 |
HGNC: | 2467 |
UniProt: | O95196 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.16e-09 | 8 |
neural cell | 9.84e-09 | 25 |
neuron | 9.74e-07 | 6 |
neuroblast | 9.74e-07 | 6 |
electrically signaling cell | 9.74e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.