FFCP PHASE1:Mm9::chr13:34027838..34027855,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20719|HGNC=|MCL_coexpression_id=58|UniProt=E9Q3Y1|association_with_transcript=0bp_to_ENSMUST00000164627,ENSMUST00000171985_5end|description=CAGE_peak_1_at_Serpinb6a_5end|id=chr13:34027838..34027855,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.53e-14!59;UBERON:0000160!7.05e-14!43;UBERON:0000344!2.51e-08!15;UBERON:0004923!4.93e-08!24;UBERON:0004119!2.71e-07!130;UBERON:0000925!2.71e-07!130;UBERON:0006595!2.71e-07!130;UBERON:0000464!3.87e-07!57;UBERON:0001242!4.88e-07!13;UBERON:0000060!4.88e-07!13;UBERON:0001262!4.88e-07!13;UBERON:0004786!4.88e-07!13;UBERON:0001007!8.73e-07!128;UBERON:0001555!8.73e-07!128;UBERON:0007026!8.73e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.12e-14,31;UBERON:0005409,1.81e-13,47;UBERON:0000344,2.50e-08,15;UBERON:0004923,4.93e-08,24;UBERON:0001242,4.88e-07,13;UBERON:0001262,4.88e-07,13;UBERON:0004786,4.88e-07,13|phase1_expression=41.6387002472464,3469.86247815817,4003.99330662792,230.175264804498,255.456822272637,1433.35322358372,2127.51031790345,6.97265946584512,0,0,0,0.159544317990673,0.513602189793617,0.174840804837995,49.6333545105337,47.1767373018294,38.4759032970481,8.83294063003066,11.3804979892763,14.429248161133,34.4425325111833,6.25532992565577,3.6567970479451,3217.92759964379,3372.54584096847,4813.78655517621,4939.54780995611,4611.73079317608,929.024497722212,714.253387739644,3282.27674923048,15.2407361630311,24.6025915033828,15.8481681015439,67.0135757822957,90.4316470750198,64.3133472226463,0.837063261473815,2.3440060335714,2.61761871986899,1.76469446409304,3.41522742479223,0.971020706062307,449.829330626738,467.449029853182,397.378718430041,64.9384815808872,13.5175596955877,40.4222576231428,61.2454182083993,117.168634900428,20.125359011096,0.838913030288682,2.90144856804538,1.34437519656986,430.395036488139,587.393551874451,437.805606343549,0.809265843438391,2.11596391708813,4.43681982454325,114.190607307298,154.737294523338,147.583553634149,114.708498057769,128.596900805244,28.4620104992484,21.9004434033286,3.42175720617976,2.43010688997043,4.41682418837902,8.85518051651791,14.1355866209033,2.57230678351403,2.20444583341944,4.5960939330501,7.70811166995721,13.4071704989447,12.4421291937557,1.18697658957174,3.11057988248193,4.16730696445408,15.355064945076,26.449842671489,21.2389564409766,10.9012576625257,16.2303716110977,8.01517617048792,129.567516793078,179.255740573295,204.354464534683,94.6466264679525,3.39985666853875,2.15881276655127,6.49776417447669,5.37632264516803,87.7777625823449,555.43242128189,601.404600655641,564.283300493013,43.8023035505476,151.425243348895,58.6052051325285,71.1066703153331,458.744515902763,436.79240807907,410.485849352004,121.605831900799,49.9750115439041,214.944217365866,140.696600007336,228.653574212418,246.066735572214,302.952507510771,235.647769099952,220.921867557569,493.153960630076,59.7195344079235,11.4999371753484,57.5889985812777,55.2103796150984,46.0631490478461,303.818570785539,18.4451902117275,8.79676168616511,582.442085875588,0.718890747035522,0,1.52484272487678,14.2301107434582,19.6725259212009,4.90051973240171,17.2086076990354,14.0643501531682,16.6230435647648,19.1444690419954,124.447702625087,69.1702756592117,29.5685627367399,32.8289295182899,14.9638509407109,18.8519725635448,22.3277040958633,29.086029842293,28.0310376503471,21.6512187281396,25.8616759784852,28.9747775227698,12.0718076042392,20.2343505779567,25.3369618796086,34.8521214559844,43.6534181284189,60.2476248083348,80.04925106269,129.571307698839,0,0.257347907114715,0.852490498186778,32.1044947430028,35.8824871771077,43.3949568121046,44.0345208188491,42.3043098256918,56.4617633167804,56.7382825190995,58.7518749065166,71.4603895287077,60.0643452184204,74.3678612278301,65.179322874868,74.7081935743448,76.4034401212856,98.7759242076336,19.5569652164638,12.3485534855141,893.121970405206,467.019700727819,32.846390582426,40.6414175755767,115.207510421951,249.885887008321,355.582492107948,422.871566848219,509.169683037261,667.360164541692,528.306608898166,486.249617668573,436.719555146829,454.802620779036,543.587195434856,540.270274339098,27.5018456381968,35.9882814720646,31.5581659884625,28.1038832426534,34.3295902286698,34.576959205927,27.5078936490519,22.1415221969403,23.0788129926821,28.7515391937795,28.1629995732791,14.5155241973002,17.8868685553015,19.5630037774823,25.3575151735629,32.8000937263287,42.0132655439343,34.5235364940973,44.4250521363597,36.2421065408268,66.1333750025831,68.4739343710046,56.4788188337355,31.3197808654419,27.6272016823745,31.8412724099822,126.186428883791,30.3186258832776,34.8745049585935,38.7018795567429,52.805305864913,52.9319773516138,74.9837468790943,66.3454402716516,59.2708141839278,73.9692063426908,56.2875333360929,113.229550468575,111.036443339771,131.341345192013,550.388186378344,261.074728232981,33.4399705652945,48.2889306033282,24.2431390881566,18.1678114217915,133.93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| ||
|EntrezGene=20719 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=E9Q3Y1 | |||
|association_with_transcript=0bp_to_ENSMUST00000164627,ENSMUST00000171985_5end | |||
|description=CAGE_peak_1_at_Serpinb6a_5end | |||
|id=chr13:34027838..34027855,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.53e-14!59;UBERON:0000160!7.05e-14!43;UBERON:0000344!2.51e-08!15;UBERON:0004923!4.93e-08!24;UBERON:0004119!2.71e-07!130;UBERON:0000925!2.71e-07!130;UBERON:0006595!2.71e-07!130;UBERON:0000464!3.87e-07!57;UBERON:0001242!4.88e-07!13;UBERON:0000060!4.88e-07!13;UBERON:0001262!4.88e-07!13;UBERON:0004786!4.88e-07!13;UBERON:0001007!8.73e-07!128;UBERON:0001555!8.73e-07!128;UBERON:0007026!8.73e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.12e-14,31;UBERON:0005409,1.81e-13,47;UBERON:0000344,2.50e-08,15;UBERON:0004923,4.93e-08,24;UBERON:0001242,4.88e-07,13;UBERON:0001262,4.88e-07,13;UBERON:0004786,4.88e-07,13 | |||
|phase1_expression=41.6387002472464,3469.86247815817,4003.99330662792,230.175264804498,255.456822272637,1433.35322358372,2127.51031790345,6.97265946584512,0,0,0,0.159544317990673,0.513602189793617,0.174840804837995,49.6333545105337,47.1767373018294,38.4759032970481,8.83294063003066,11.3804979892763,14.429248161133,34.4425325111833,6.25532992565577,3.6567970479451,3217.92759964379,3372.54584096847,4813.78655517621,4939.54780995611,4611.73079317608,929.024497722212,714.253387739644,3282.27674923048,15.2407361630311,24.6025915033828,15.8481681015439,67.0135757822957,90.4316470750198,64.3133472226463,0.837063261473815,2.3440060335714,2.61761871986899,1.76469446409304,3.41522742479223,0.971020706062307,449.829330626738,467.449029853182,397.378718430041,64.9384815808872,13.5175596955877,40.4222576231428,61.2454182083993,117.168634900428,20.125359011096,0.838913030288682,2.90144856804538,1.34437519656986,430.395036488139,587.393551874451,437.805606343549,0.809265843438391,2.11596391708813,4.43681982454325,114.190607307298,154.737294523338,147.583553634149,114.708498057769,128.596900805244,28.4620104992484,21.9004434033286,3.42175720617976,2.43010688997043,4.41682418837902,8.85518051651791,14.1355866209033,2.57230678351403,2.20444583341944,4.5960939330501,7.70811166995721,13.4071704989447,12.4421291937557,1.18697658957174,3.11057988248193,4.16730696445408,15.355064945076,26.449842671489,21.2389564409766,10.9012576625257,16.2303716110977,8.01517617048792,129.567516793078,179.255740573295,204.354464534683,94.6466264679525,3.39985666853875,2.15881276655127,6.49776417447669,5.37632264516803,87.7777625823449,555.43242128189,601.404600655641,564.283300493013,43.8023035505476,151.425243348895,58.6052051325285,71.1066703153331,458.744515902763,436.79240807907,410.485849352004,121.605831900799,49.9750115439041,214.944217365866,140.696600007336,228.653574212418,246.066735572214,302.952507510771,235.647769099952,220.921867557569,493.153960630076,59.7195344079235,11.4999371753484,57.5889985812777,55.2103796150984,46.0631490478461,303.818570785539,18.4451902117275,8.79676168616511,582.442085875588,0.718890747035522,0,1.52484272487678,14.2301107434582,19.6725259212009,4.90051973240171,17.2086076990354,14.0643501531682,16.6230435647648,19.1444690419954,124.447702625087,69.1702756592117,29.5685627367399,32.8289295182899,14.9638509407109,18.8519725635448,22.3277040958633,29.086029842293,28.0310376503471,21.6512187281396,25.8616759784852,28.9747775227698,12.0718076042392,20.2343505779567,25.3369618796086,34.8521214559844,43.6534181284189,60.2476248083348,80.04925106269,129.571307698839,0,0.257347907114715,0.852490498186778,32.1044947430028,35.8824871771077,43.3949568121046,44.0345208188491,42.3043098256918,56.4617633167804,56.7382825190995,58.7518749065166,71.4603895287077,60.0643452184204,74.3678612278301,65.179322874868,74.7081935743448,76.4034401212856,98.7759242076336,19.5569652164638,12.3485534855141,893.121970405206,467.019700727819,32.846390582426,40.6414175755767,115.207510421951,249.885887008321,355.582492107948,422.871566848219,509.169683037261,667.360164541692,528.306608898166,486.249617668573,436.719555146829,454.802620779036,543.587195434856,540.270274339098,27.5018456381968,35.9882814720646,31.5581659884625,28.1038832426534,34.3295902286698,34.576959205927,27.5078936490519,22.1415221969403,23.0788129926821,28.7515391937795,28.1629995732791,14.5155241973002,17.8868685553015,19.5630037774823,25.3575151735629,32.8000937263287,42.0132655439343,34.5235364940973,44.4250521363597,36.2421065408268,66.1333750025831,68.4739343710046,56.4788188337355,31.3197808654419,27.6272016823745,31.8412724099822,126.186428883791,30.3186258832776,34.8745049585935,38.7018795567429,52.805305864913,52.9319773516138,74.9837468790943,66.3454402716516,59.2708141839278,73.9692063426908,56.2875333360929,113.229550468575,111.036443339771,131.341345192013,550.388186378344,261.074728232981,33.4399705652945,48.2889306033282,24.2431390881566,18.1678114217915,133.934850372744,112.097091678742,46.3797082541897,52.3187917357496,36.8374010123086,46.8378843987002,52.1348897352802,31.7045714483492,51.0061484110367,64.5885445983999,46.2486700197433,12.8528526568723,221.142652754482,68.9113886192278,132.264210995104,82.3200913632952,55.7529581027844,53.1689593179409,70.1390652158222,99.7720871908701,46.9530009680429,88.2338874599072,201.832496964381,87.9751625335563,84.8463760555637,62.2592413133558,70.6304677452492,77.3516574361401,88.8547371017387,24.6683698822895,21.4735415079372,35.1512737451811,37.4187892985197,41.3815656836804,50.352000304249,59.3706650773469,243.354561262068,138.114510203211,198.696086647521,161.58852788265,95.4254761772802,65.3188976971928,66.0129062337345,48.7498472242832,578.297979873624,28.9263471136395,56.0456489016957,55.7244543500701,70.5591149278602,58.3942216714542,46.7494258805906,52.8477580107067,5.60928818979723,5.73800954526998,7.60099855924331,179.478076186841,21.5108475635172,58.5560065325324,85.1082085675794,71.926373828977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| |||
|short_description=p1@Serpinb6a | |||
}} | |||
Revision as of 00:24, 13 September 2013
| Short description: | p1@Serpinb6a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Serpinb6a_5end |
| Coexpression cluster: | MCL_coexpression_mm9:58 |
| Association with transcript: | 0bp_to_ENSMUST00000164627, ENSMUST00000171985_5end |
| EntrezGene: | Serpinb6a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 7.12e-14 | 31 |
| gastrointestinal system | 1.81e-13 | 47 |
| mucosa | 2.50e-08 | 15 |
| organ component layer | 4.93e-08 | 24 |
| intestinal mucosa | 4.88e-07 | 13 |
| wall of intestine | 4.88e-07 | 13 |
| gastrointestinal system mucosa | 4.88e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
