FFCP PHASE1:Mm9::chr13:100200167..100200197,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100200167..100200197,-|id=chr13:100200167..100200197,-|ontology_enrichment_celltype=CL:0000117!2.02e-14!23;CL:0000337!2.02e-14!23;CL:0000540!5.17e-14!33;CL:0000047!5.17e-14!33;CL:0000031!5.17e-14!33;CL:0000404!5.17e-14!33;CL:0000393!3.08e-10!39;CL:0000211!3.08e-10!39;CL:0002319!1.41e-09!43;CL:0000221!2.23e-09!44;CL:0000133!2.23e-09!44;CL:0000055!9.03e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.32e-25,23;CL:0000337,1.32e-25,23;CL:0000540,2.48e-20,33;CL:0000047,2.48e-20,33;CL:0000031,2.48e-20,33;CL:0000404,2.48e-20,33;CL:0000393,6.02e-16,39;CL:0000211,6.02e-16,39;CL:0002319,8.08e-15,43;CL:0000221,2.69e-14,44;CL:0000133,2.69e-14,44;CL:0002609,1.53e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.92e-25!75;UBERON:0001016!1.92e-25!75;UBERON:0002346!1.95e-25!71;UBERON:0003075!1.95e-25!71;UBERON:0007284!1.95e-25!71;UBERON:0001017!4.34e-25!73;UBERON:0005743!4.34e-25!73;UBERON:0000033!5.88e-23!63;UBERON:0001049!7.32e-23!52;UBERON:0005068!7.32e-23!52;UBERON:0006241!7.32e-23!52;UBERON:0007135!7.32e-23!52;UBERON:0003056!3.47e-22!49;UBERON:0004121!4.07e-22!102;UBERON:0000924!4.07e-22!102;UBERON:0006601!4.07e-22!102;UBERON:0000955!1.91e-21!50;UBERON:0006238!1.91e-21!50;UBERON:0002616!6.72e-21!49;UBERON:0003080!4.30e-19!40;UBERON:0002020!4.49e-19!34;UBERON:0002780!1.63e-18!39;UBERON:0001890!1.63e-18!39;UBERON:0006240!1.63e-18!39;UBERON:0002791!3.96e-16!29;UBERON:0003528!3.96e-16!29;UBERON:0001893!3.96e-16!29;UBERON:0000956!1.14e-11!21;UBERON:0001869!1.14e-11!21;UBERON:0000203!1.14e-11!21;UBERON:0007811!8.09e-11!86;UBERON:0000153!3.43e-10!94;UBERON:0002619!2.15e-09!17;UBERON:0000025!7.99e-08!114;UBERON:0002021!8.52e-08!10;UBERON:0000411!8.52e-08!10;UBERON:0001950!8.52e-08!10;UBERON:0004111!1.37e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.02e-36,75;UBERON:0001017,5.50e-36,73;UBERON:0002346,9.14e-36,64;UBERON:0003075,9.14e-36,64;UBERON:0007284,9.14e-36,64;UBERON:0000073,9.85e-36,54;UBERON:0002020,7.19e-34,34;UBERON:0001049,1.11e-33,52;UBERON:0005068,1.11e-33,52;UBERON:0006241,1.11e-33,52;UBERON:0007135,1.11e-33,52;UBERON:0004121,8.02e-32,95;UBERON:0000924,8.02e-32,95;UBERON:0006601,8.02e-32,95;UBERON:0010371,1.51e-29,73;UBERON:0003528,2.40e-28,29;UBERON:0002791,2.40e-28,29;UBERON:0001893,2.40e-28,29;UBERON:0000955,7.19e-28,47;UBERON:0006238,7.19e-28,47;UBERON:0003056,1.67e-27,49;UBERON:0002616,6.43e-27,46;UBERON:0003080,1.83e-26,40;UBERON:0002780,1.94e-25,39;UBERON:0001890,1.94e-25,39;UBERON:0006240,1.94e-25,39;UBERON:0010314,1.42e-21,92;UBERON:0000956,5.35e-20,21;UBERON:0001869,5.35e-20,21;UBERON:0000203,5.35e-20,21;UBERON:0002619,9.33e-16,17;UBERON:0002021,3.25e-13,10;UBERON:0000411,3.25e-13,10;UBERON:0001950,3.25e-13,10;UBERON:0000025,5.02e-10,114;UBERON:0002420,2.36e-09,8;UBERON:0007245,2.36e-09,8;UBERON:0010009,2.36e-09,8;UBERON:0010011,2.36e-09,8;UBERON:0000454,2.36e-09,8;UBERON:0004111,1.33e-08,122;UBERON:0002240,7.12e-08,6;UBERON:0005174,7.12e-08,6;UBERON:0001137,7.12e-08,6;UBERON:0003076,1.65e-07,12;UBERON:0003057,1.65e-07,12;UBERON:0000369,6.25e-07,5;UBERON:0002435,6.25e-07,5;UBERON:0000204,6.25e-07,5;UBERON:0010082,6.25e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0.439372365468944,0,0.139986421625363,0,0,0,0,0,0,0,2.63011399117477,7.40587370980846,4.43681982454325,0.338844532069132,1.77858959222228,0,0,0,0,0,2.59224030771194,2.70011876663381,2.52389953621658,1.42825492201902,1.10434270475807,2.08234358665422,3.64212789869298,1.83843757322004,1.10115880999389,4.85211884723713,4.91540906419979,2.50583946687368,6.03818447775904,3.12548022334056,2.23346399201105,1.12552522006336,2.44477196442896,12.374400589894,3.84403538157578,3.54158947068071,0.302904773332736,1.058001841495,0,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.60289056221049,0.23517741427141,0.125666591329675,0,0.433798070759735,0,0.323533699894818,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0,2.39665023047716,1.37250180845588,4.90051973240171,2.60736480288415,2.30143911597297,3.1168206683934,1.62241263067758,0.305518091550949,0.124406970610093,0.252722758433675,0.631325567659422,0.390361328888111,0.459804208866946,1.26043490863744,1.50704817835715,1.2246569847239,1.5373646434182,0.937017245597288,3.3631438196072,0.215567992932842,0.189106080167819,0,0.219195732427575,0.278047249225598,0.348252166522167,0.61734640922383,0.199034266818493,0,0,0,0.414251545071004,1.40715635988658,0.900310307305074,0.23674473558521,0.787056926989615,0.617068451549513,0,0.268273401399619,0.116765342367169,0.329119699826961,0,0.243206428637567,0.292399974850665,0.439100230582101,0.134206418760372,2.3131894342054,6.99751364179134,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0.379335801906163,0,0,0,0.387904974335251,0.140271639780637,0.0632365371242573,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0.488894929326078,0.678980343100753,0.469380496577004,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,3.21101179975584,2.46144541843627,0,0,1.26203287766503,0.780877488593277,1.07711698866399,0.477937595905104,0.891194696329576,0,0,0.876767573733936,3.16230222357219,1.92792789853084,0.283880170416537,0,0,0.494910368917606,0,0.485561272309963,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,1.02131881726136,0.540183282093931,0.517434735131018,0.428674070063185,0.709360934569094,1.60531935841864,0.822745103010605,0.304464949114599,0,0,0.661585194164886,0,0,0.120625849856312,0,0.164140899745061,0,6.30446026835733,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,1.04544148007234,0.436725127492355,0.404593039154462,0,0,0.259229946583586,0,0,0.149516546043979,0,0.777804753376191,0.129159823477731,0.675824501963113,0.234714477291508,0.13020438484395,0.419437377702843,0.483168241652012,0.288030006257865,0.316011120628178,0.202725215290164,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0.887943813496259,0.358855426437903,0.167884616364078,0.386379188064381,0.375364950902364,0.36630324853453,0.428736758158132,0,6.7770221114048,3.68260189205742,8.02053718815155,3.95262319390481,4.7955776383945,3.7769694869485,4.05013500139084,2.2516060161211,1.35942722695261,4.14208249401456,1.45302286617847,1.19707462020309,1.19513524027894,1.21553358534147,0.419226325255965,0,0.44449345560323,1.03017528619447,0.962757628775446,0.758091635291392,0.760437899670719,0.754505365544305,0.749132059759059,0.576226371643824,0.402048282689293,0.476293691283074,1.39061191133827,0.964546102318525,0.412085900803307,1.17759136107518,2.05721551431249,1.77475806159337,0,0.872078499793971,0.564656282491984,0.423073039458382,0.73171189149109,1.31534855718921,0.543216455383447,2.80571135828869,1.42362021749009,0.788035859004508,2.04615521584845,0.464810523557898,0.578719832943424,2.99772693525535,1.16965804222704,0.644613162144895,0.382576664137687,0.661774257358546,0.231867835620421|short_description=p@chr13:100200167..100200197,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:100200167..100200197,- | |||
|id=chr13:100200167..100200197,- | |||
|ontology_enrichment_celltype=CL:0000117!2.02e-14!23;CL:0000337!2.02e-14!23;CL:0000540!5.17e-14!33;CL:0000047!5.17e-14!33;CL:0000031!5.17e-14!33;CL:0000404!5.17e-14!33;CL:0000393!3.08e-10!39;CL:0000211!3.08e-10!39;CL:0002319!1.41e-09!43;CL:0000221!2.23e-09!44;CL:0000133!2.23e-09!44;CL:0000055!9.03e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.32e-25,23;CL:0000337,1.32e-25,23;CL:0000540,2.48e-20,33;CL:0000047,2.48e-20,33;CL:0000031,2.48e-20,33;CL:0000404,2.48e-20,33;CL:0000393,6.02e-16,39;CL:0000211,6.02e-16,39;CL:0002319,8.08e-15,43;CL:0000221,2.69e-14,44;CL:0000133,2.69e-14,44;CL:0002609,1.53e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.92e-25!75;UBERON:0001016!1.92e-25!75;UBERON:0002346!1.95e-25!71;UBERON:0003075!1.95e-25!71;UBERON:0007284!1.95e-25!71;UBERON:0001017!4.34e-25!73;UBERON:0005743!4.34e-25!73;UBERON:0000033!5.88e-23!63;UBERON:0001049!7.32e-23!52;UBERON:0005068!7.32e-23!52;UBERON:0006241!7.32e-23!52;UBERON:0007135!7.32e-23!52;UBERON:0003056!3.47e-22!49;UBERON:0004121!4.07e-22!102;UBERON:0000924!4.07e-22!102;UBERON:0006601!4.07e-22!102;UBERON:0000955!1.91e-21!50;UBERON:0006238!1.91e-21!50;UBERON:0002616!6.72e-21!49;UBERON:0003080!4.30e-19!40;UBERON:0002020!4.49e-19!34;UBERON:0002780!1.63e-18!39;UBERON:0001890!1.63e-18!39;UBERON:0006240!1.63e-18!39;UBERON:0002791!3.96e-16!29;UBERON:0003528!3.96e-16!29;UBERON:0001893!3.96e-16!29;UBERON:0000956!1.14e-11!21;UBERON:0001869!1.14e-11!21;UBERON:0000203!1.14e-11!21;UBERON:0007811!8.09e-11!86;UBERON:0000153!3.43e-10!94;UBERON:0002619!2.15e-09!17;UBERON:0000025!7.99e-08!114;UBERON:0002021!8.52e-08!10;UBERON:0000411!8.52e-08!10;UBERON:0001950!8.52e-08!10;UBERON:0004111!1.37e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.02e-36,75;UBERON:0001017,5.50e-36,73;UBERON:0002346,9.14e-36,64;UBERON:0003075,9.14e-36,64;UBERON:0007284,9.14e-36,64;UBERON:0000073,9.85e-36,54;UBERON:0002020,7.19e-34,34;UBERON:0001049,1.11e-33,52;UBERON:0005068,1.11e-33,52;UBERON:0006241,1.11e-33,52;UBERON:0007135,1.11e-33,52;UBERON:0004121,8.02e-32,95;UBERON:0000924,8.02e-32,95;UBERON:0006601,8.02e-32,95;UBERON:0010371,1.51e-29,73;UBERON:0003528,2.40e-28,29;UBERON:0002791,2.40e-28,29;UBERON:0001893,2.40e-28,29;UBERON:0000955,7.19e-28,47;UBERON:0006238,7.19e-28,47;UBERON:0003056,1.67e-27,49;UBERON:0002616,6.43e-27,46;UBERON:0003080,1.83e-26,40;UBERON:0002780,1.94e-25,39;UBERON:0001890,1.94e-25,39;UBERON:0006240,1.94e-25,39;UBERON:0010314,1.42e-21,92;UBERON:0000956,5.35e-20,21;UBERON:0001869,5.35e-20,21;UBERON:0000203,5.35e-20,21;UBERON:0002619,9.33e-16,17;UBERON:0002021,3.25e-13,10;UBERON:0000411,3.25e-13,10;UBERON:0001950,3.25e-13,10;UBERON:0000025,5.02e-10,114;UBERON:0002420,2.36e-09,8;UBERON:0007245,2.36e-09,8;UBERON:0010009,2.36e-09,8;UBERON:0010011,2.36e-09,8;UBERON:0000454,2.36e-09,8;UBERON:0004111,1.33e-08,122;UBERON:0002240,7.12e-08,6;UBERON:0005174,7.12e-08,6;UBERON:0001137,7.12e-08,6;UBERON:0003076,1.65e-07,12;UBERON:0003057,1.65e-07,12;UBERON:0000369,6.25e-07,5;UBERON:0002435,6.25e-07,5;UBERON:0000204,6.25e-07,5;UBERON:0010082,6.25e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0.439372365468944,0,0.139986421625363,0,0,0,0,0,0,0,2.63011399117477,7.40587370980846,4.43681982454325,0.338844532069132,1.77858959222228,0,0,0,0,0,2.59224030771194,2.70011876663381,2.52389953621658,1.42825492201902,1.10434270475807,2.08234358665422,3.64212789869298,1.83843757322004,1.10115880999389,4.85211884723713,4.91540906419979,2.50583946687368,6.03818447775904,3.12548022334056,2.23346399201105,1.12552522006336,2.44477196442896,12.374400589894,3.84403538157578,3.54158947068071,0.302904773332736,1.058001841495,0,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.60289056221049,0.23517741427141,0.125666591329675,0,0.433798070759735,0,0.323533699894818,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0,2.39665023047716,1.37250180845588,4.90051973240171,2.60736480288415,2.30143911597297,3.1168206683934,1.62241263067758,0.305518091550949,0.124406970610093,0.252722758433675,0.631325567659422,0.390361328888111,0.459804208866946,1.26043490863744,1.50704817835715,1.2246569847239,1.5373646434182,0.937017245597288,3.3631438196072,0.215567992932842,0.189106080167819,0,0.219195732427575,0.278047249225598,0.348252166522167,0.61734640922383,0.199034266818493,0,0,0,0.414251545071004,1.40715635988658,0.900310307305074,0.23674473558521,0.787056926989615,0.617068451549513,0,0.268273401399619,0.116765342367169,0.329119699826961,0,0.243206428637567,0.292399974850665,0.439100230582101,0.134206418760372,2.3131894342054,6.99751364179134,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0.379335801906163,0,0,0,0.387904974335251,0.140271639780637,0.0632365371242573,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0.488894929326078,0.678980343100753,0.469380496577004,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,3.21101179975584,2.46144541843627,0,0,1.26203287766503,0.780877488593277,1.07711698866399,0.477937595905104,0.891194696329576,0,0,0.876767573733936,3.16230222357219,1.92792789853084,0.283880170416537,0,0,0.494910368917606,0,0.485561272309963,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,1.02131881726136,0.540183282093931,0.517434735131018,0.428674070063185,0.709360934569094,1.60531935841864,0.822745103010605,0.304464949114599,0,0,0.661585194164886,0,0,0.120625849856312,0,0.164140899745061,0,6.30446026835733,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,1.04544148007234,0.436725127492355,0.404593039154462,0,0,0.259229946583586,0,0,0.149516546043979,0,0.777804753376191,0.129159823477731,0.675824501963113,0.234714477291508,0.13020438484395,0.419437377702843,0.483168241652012,0.288030006257865,0.316011120628178,0.202725215290164,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0.887943813496259,0.358855426437903,0.167884616364078,0.386379188064381,0.375364950902364,0.36630324853453,0.428736758158132,0,6.7770221114048,3.68260189205742,8.02053718815155,3.95262319390481,4.7955776383945,3.7769694869485,4.05013500139084,2.2516060161211,1.35942722695261,4.14208249401456,1.45302286617847,1.19707462020309,1.19513524027894,1.21553358534147,0.419226325255965,0,0.44449345560323,1.03017528619447,0.962757628775446,0.758091635291392,0.760437899670719,0.754505365544305,0.749132059759059,0.576226371643824,0.402048282689293,0.476293691283074,1.39061191133827,0.964546102318525,0.412085900803307,1.17759136107518,2.05721551431249,1.77475806159337,0,0.872078499793971,0.564656282491984,0.423073039458382,0.73171189149109,1.31534855718921,0.543216455383447,2.80571135828869,1.42362021749009,0.788035859004508,2.04615521584845,0.464810523557898,0.578719832943424,2.99772693525535,1.16965804222704,0.644613162144895,0.382576664137687,0.661774257358546,0.231867835620421 | |||
|short_description=p@chr13:100200167..100200197,- | |||
}} |
Revision as of 23:40, 12 September 2013
Short description: | p@chr13:100200167..100200197, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100200167..100200197, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.32e-25 | 23 |
neuroblast (sensu Vertebrata) | 1.32e-25 | 23 |
neuron | 2.48e-20 | 33 |
neuronal stem cell | 2.48e-20 | 33 |
neuroblast | 2.48e-20 | 33 |
electrically signaling cell | 2.48e-20 | 33 |
electrically responsive cell | 6.02e-16 | 39 |
electrically active cell | 6.02e-16 | 39 |
neural cell | 8.08e-15 | 43 |
ectodermal cell | 2.69e-14 | 44 |
neurectodermal cell | 2.69e-14 | 44 |
neuron of cerebral cortex | 1.53e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.