FFCP PHASE1:Mm9::chr12:87027663..87027678,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=53314|HGNC=|MCL_coexpression_id=7|UniProt=O35284|association_with_transcript=0bp_to_NM_016767,uc007ohd.1_5end|description=CAGE_peak_2_at_Batf_5end|id=chr12:87027663..87027678,+|ontology_enrichment_celltype=CL:0000988!3.44e-11!32;CL:0002032!3.44e-11!32;CL:0000037!3.44e-11!32;CL:0000566!3.44e-11!32;CL:0000837!3.44e-11!32;CL:0000838!5.68e-10!12;CL:0000738!2.53e-09!17;CL:0002087!2.53e-09!17;CL:0002031!2.84e-09!25;CL:0000084!3.05e-09!11;CL:0000827!3.05e-09!11;CL:0000542!1.04e-08!13;CL:0000051!1.04e-08!13;CL:0002320!1.06e-08!46;CL:0000134!1.06e-08!46;CL:0000791!1.89e-08!9;CL:0000789!1.89e-08!9;CL:0002420!1.89e-08!9;CL:0002419!1.89e-08!9;CL:0000790!1.89e-08!9;CL:0000219!4.04e-08!54;CL:0000624!1.12e-07!8|ontology_enrichment_celltype_v019_2=CL:0002320,1.40e-20,46;CL:0000134,1.40e-20,46;CL:0000988,2.75e-20,32;CL:0002032,2.75e-20,32;CL:0000037,2.75e-20,32;CL:0000837,2.75e-20,32;CL:0000838,2.42e-18,12;CL:0000219,3.98e-18,54;CL:0002031,4.42e-18,25;CL:0000791,2.06e-17,9;CL:0000789,2.06e-17,9;CL:0002420,2.06e-17,9;CL:0002419,2.06e-17,9;CL:0000790,2.06e-17,9;CL:0000738,6.88e-17,17;CL:0002087,6.88e-17,17;CL:0000542,1.07e-16,13;CL:0000051,1.07e-16,13;CL:0000084,1.12e-16,11;CL:0000827,1.12e-16,11;CL:0000624,1.22e-15,8;CL:0000893,5.08e-12,6;CL:0002489,5.08e-12,6;CL:0000898,5.08e-12,6;CL:0000809,5.08e-12,6;CL:0000810,5.08e-12,6;CL:0000895,5.08e-12,6;CL:0000808,5.08e-12,6;CL:0000894,5.08e-12,6;CL:0000806,5.08e-12,6;CL:0000807,5.08e-12,6;CL:0000805,5.08e-12,6;CL:0002425,5.08e-12,6;CL:0002436,5.08e-12,6;CL:0002427,5.08e-12,6;CL:0002428,5.08e-12,6;CL:0002429,5.08e-12,6;CL:0002433,5.08e-12,6;CL:0002431,5.08e-12,6;CL:0002432,5.08e-12,6;CL:0000034,4.31e-11,97;CL:0000723,2.69e-09,91;CL:0000048,2.69e-09,91;CL:0000049,7.27e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.65e-18!48;UBERON:0002390!3.19e-16!45;UBERON:0003061!3.19e-16!45;UBERON:0004177!5.25e-12!29;UBERON:0002405!1.46e-11!70;UBERON:0002370!5.22e-10!23;UBERON:0000974!5.22e-10!23;UBERON:0004807!5.22e-10!23;UBERON:0005058!5.22e-10!23;UBERON:0003351!5.22e-10!23;UBERON:0009113!5.22e-10!23;UBERON:0003295!5.22e-10!23;UBERON:0009722!5.22e-10!23;UBERON:0005562!5.22e-10!23;UBERON:0007690!5.22e-10!23;UBERON:0006562!3.43e-09!24;UBERON:0003408!3.43e-09!24;UBERON:0001557!3.43e-09!24;UBERON:0001042!3.43e-09!24;UBERON:0008814!3.43e-09!24;UBERON:0009145!3.43e-09!24;UBERON:0002384!1.06e-08!46;UBERON:0000065!1.19e-08!41;UBERON:0003081!1.95e-08!88;UBERON:0001004!3.79e-08!42;UBERON:0000072!6.93e-08!27|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.84e-26,48;UBERON:0002405,1.84e-26,48;UBERON:0002390,1.51e-22,45;UBERON:0003061,1.51e-22,45;UBERON:0002384,1.40e-20,46;UBERON:0002370,1.54e-19,23;UBERON:0000974,1.54e-19,23;UBERON:0004807,1.54e-19,23;UBERON:0005058,1.54e-19,23;UBERON:0003351,1.54e-19,23;UBERON:0009113,1.54e-19,23;UBERON:0003295,1.54e-19,23;UBERON:0009722,1.54e-19,23;UBERON:0005562,1.54e-19,23;UBERON:0007690,1.54e-19,23;UBERON:0006562,1.61e-18,24;UBERON:0003408,1.61e-18,24;UBERON:0001557,1.61e-18,24;UBERON:0001042,1.61e-18,24;UBERON:0008814,1.61e-18,24;UBERON:0009145,1.61e-18,24;UBERON:0004177,1.89e-16,29;UBERON:0005057,1.89e-16,29;UBERON:0000072,6.31e-16,27;UBERON:0000077,1.41e-14,35;UBERON:0000065,2.70e-11,41;UBERON:0001004,6.63e-11,42;UBERON:0007811,8.92e-11,36;UBERON:0003081,4.08e-09,87;UBERON:0000153,2.69e-08,43;UBERON:0002371,6.29e-07,16;UBERON:0000490,7.47e-07,66|phase1_expression=0.160148847104794,0,0,0,0,0,0,28.6653778040299,50.261573808145,80.9863261074097,3.4243593645101,5.66382328866889,15.9216678836021,10.6652890951177,0.333109761815663,1.21485160433896,0,3.15462165358238,2.33094537129756,3.81950686618227,0.340173160604279,0.595745707205312,1.56719873483361,1.75991665072747,2.2940928106717,0,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,1.25559489221072,3.906676722619,1.0470474879476,1.17646297606203,2.04913645487534,1.45653105909346,0,0,0,4.69434806608824,0,0,0,0.839918529752175,0,4.19456515144341,26.1130371124084,15.7964085596958,0,0,0,0,0,0,4.40497891689872,3.55717918444456,2.6996991518442,0,1.4209602298922,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.984440513331393,0.0755715601067855,7.53647670624362,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.22836775943812,3.6251303710604,0.29688427812965,0.173485326766136,0,0,0,0.352766121407114,0,0,0,0,0.323533699894818,0,0,0,0,0,0.766371165625774,3.11519323715393,1.79970819298022,1.14363204365758,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0.215567992932842,0,0,0,0.278047249225598,0,0,0,1.40442637462647,0.257347907114715,0.852490498186778,0.207125772535502,0,0.36012412292203,0,0.196764231747404,0,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0,0.219550115291051,0.134206418760372,0,0.102904612379284,0.330418782983798,0,0,0,0,0.201683524623343,0,0.1902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| ||
|EntrezGene=53314 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=O35284 | |||
|association_with_transcript=0bp_to_NM_016767,uc007ohd.1_5end | |||
|description=CAGE_peak_2_at_Batf_5end | |||
|id=chr12:87027663..87027678,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.44e-11!32;CL:0002032!3.44e-11!32;CL:0000037!3.44e-11!32;CL:0000566!3.44e-11!32;CL:0000837!3.44e-11!32;CL:0000838!5.68e-10!12;CL:0000738!2.53e-09!17;CL:0002087!2.53e-09!17;CL:0002031!2.84e-09!25;CL:0000084!3.05e-09!11;CL:0000827!3.05e-09!11;CL:0000542!1.04e-08!13;CL:0000051!1.04e-08!13;CL:0002320!1.06e-08!46;CL:0000134!1.06e-08!46;CL:0000791!1.89e-08!9;CL:0000789!1.89e-08!9;CL:0002420!1.89e-08!9;CL:0002419!1.89e-08!9;CL:0000790!1.89e-08!9;CL:0000219!4.04e-08!54;CL:0000624!1.12e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.40e-20,46;CL:0000134,1.40e-20,46;CL:0000988,2.75e-20,32;CL:0002032,2.75e-20,32;CL:0000037,2.75e-20,32;CL:0000837,2.75e-20,32;CL:0000838,2.42e-18,12;CL:0000219,3.98e-18,54;CL:0002031,4.42e-18,25;CL:0000791,2.06e-17,9;CL:0000789,2.06e-17,9;CL:0002420,2.06e-17,9;CL:0002419,2.06e-17,9;CL:0000790,2.06e-17,9;CL:0000738,6.88e-17,17;CL:0002087,6.88e-17,17;CL:0000542,1.07e-16,13;CL:0000051,1.07e-16,13;CL:0000084,1.12e-16,11;CL:0000827,1.12e-16,11;CL:0000624,1.22e-15,8;CL:0000893,5.08e-12,6;CL:0002489,5.08e-12,6;CL:0000898,5.08e-12,6;CL:0000809,5.08e-12,6;CL:0000810,5.08e-12,6;CL:0000895,5.08e-12,6;CL:0000808,5.08e-12,6;CL:0000894,5.08e-12,6;CL:0000806,5.08e-12,6;CL:0000807,5.08e-12,6;CL:0000805,5.08e-12,6;CL:0002425,5.08e-12,6;CL:0002436,5.08e-12,6;CL:0002427,5.08e-12,6;CL:0002428,5.08e-12,6;CL:0002429,5.08e-12,6;CL:0002433,5.08e-12,6;CL:0002431,5.08e-12,6;CL:0002432,5.08e-12,6;CL:0000034,4.31e-11,97;CL:0000723,2.69e-09,91;CL:0000048,2.69e-09,91;CL:0000049,7.27e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.65e-18!48;UBERON:0002390!3.19e-16!45;UBERON:0003061!3.19e-16!45;UBERON:0004177!5.25e-12!29;UBERON:0002405!1.46e-11!70;UBERON:0002370!5.22e-10!23;UBERON:0000974!5.22e-10!23;UBERON:0004807!5.22e-10!23;UBERON:0005058!5.22e-10!23;UBERON:0003351!5.22e-10!23;UBERON:0009113!5.22e-10!23;UBERON:0003295!5.22e-10!23;UBERON:0009722!5.22e-10!23;UBERON:0005562!5.22e-10!23;UBERON:0007690!5.22e-10!23;UBERON:0006562!3.43e-09!24;UBERON:0003408!3.43e-09!24;UBERON:0001557!3.43e-09!24;UBERON:0001042!3.43e-09!24;UBERON:0008814!3.43e-09!24;UBERON:0009145!3.43e-09!24;UBERON:0002384!1.06e-08!46;UBERON:0000065!1.19e-08!41;UBERON:0003081!1.95e-08!88;UBERON:0001004!3.79e-08!42;UBERON:0000072!6.93e-08!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.84e-26,48;UBERON:0002405,1.84e-26,48;UBERON:0002390,1.51e-22,45;UBERON:0003061,1.51e-22,45;UBERON:0002384,1.40e-20,46;UBERON:0002370,1.54e-19,23;UBERON:0000974,1.54e-19,23;UBERON:0004807,1.54e-19,23;UBERON:0005058,1.54e-19,23;UBERON:0003351,1.54e-19,23;UBERON:0009113,1.54e-19,23;UBERON:0003295,1.54e-19,23;UBERON:0009722,1.54e-19,23;UBERON:0005562,1.54e-19,23;UBERON:0007690,1.54e-19,23;UBERON:0006562,1.61e-18,24;UBERON:0003408,1.61e-18,24;UBERON:0001557,1.61e-18,24;UBERON:0001042,1.61e-18,24;UBERON:0008814,1.61e-18,24;UBERON:0009145,1.61e-18,24;UBERON:0004177,1.89e-16,29;UBERON:0005057,1.89e-16,29;UBERON:0000072,6.31e-16,27;UBERON:0000077,1.41e-14,35;UBERON:0000065,2.70e-11,41;UBERON:0001004,6.63e-11,42;UBERON:0007811,8.92e-11,36;UBERON:0003081,4.08e-09,87;UBERON:0000153,2.69e-08,43;UBERON:0002371,6.29e-07,16;UBERON:0000490,7.47e-07,66 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,28.6653778040299,50.261573808145,80.9863261074097,3.4243593645101,5.66382328866889,15.9216678836021,10.6652890951177,0.333109761815663,1.21485160433896,0,3.15462165358238,2.33094537129756,3.81950686618227,0.340173160604279,0.595745707205312,1.56719873483361,1.75991665072747,2.2940928106717,0,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,1.25559489221072,3.906676722619,1.0470474879476,1.17646297606203,2.04913645487534,1.45653105909346,0,0,0,4.69434806608824,0,0,0,0.839918529752175,0,4.19456515144341,26.1130371124084,15.7964085596958,0,0,0,0,0,0,4.40497891689872,3.55717918444456,2.6996991518442,0,1.4209602298922,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.984440513331393,0.0755715601067855,7.53647670624362,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.22836775943812,3.6251303710604,0.29688427812965,0.173485326766136,0,0,0,0.352766121407114,0,0,0,0,0.323533699894818,0,0,0,0,0,0.766371165625774,3.11519323715393,1.79970819298022,1.14363204365758,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0.215567992932842,0,0,0,0.278047249225598,0,0,0,1.40442637462647,0.257347907114715,0.852490498186778,0.207125772535502,0,0.36012412292203,0,0.196764231747404,0,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0,0.219550115291051,0.134206418760372,0,0.102904612379284,0.330418782983798,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0.407302655690628,0,0.280543279561274,0.126473074248515,0,0,0,0.296452627087149,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0,0.287696137450811,0.324270453550071,0,0,0,0,0.505157755894224,0,0,0.554259570499814,0.189491411770485,0,0,0.234690248288502,0,0,0.390267295715598,0.788175720530955,0.664394068946325,1.91345722388985,0.655453258862952,1.03610989119537,0.578596234326046,3.01582567878545,2.71952841909355,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0.565815239267694,0,0.307435147943927,1.03371317267288,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0.469343416127421,0,0,0.16488625294148,0.484393280087717,0,0,0,0.291480836629851,0,2.9048049735635,0.82554747185289,0.555583582109135,0.188368457004691,0.956859594047176,0.457556346413045,3.90950388985867,3.35883485576779,3.73139929271944,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0.352071715937262,0,0.104859344425711,0,0.288030006257865,1.58005560314089,0.608175645870493,1.64337531463724,1.29920822977795,1.07416017400489,0.79472541912506,1.20195449519969,1.32920574457119,1.71642964911851,1.295515713135,1.41156659191577,1.75424185331554,1.53938946624527,2.10378423926824,0,0,0,0,0.19318959403219,0.750729901804728,0.549454872801795,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0,0.412070114477788,0.320919209591815,0,0.50695859978048,0.188626341386076,0.187283014939765,0,0.17230640686684,0,0.347652977834566,0.38581844092741,0.412085900803307,0,0.685738504770831,0.354951612318675,0.476872379894642,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Batf | |||
}} |
Revision as of 23:31, 12 September 2013
Short description: | p2@Batf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Batf_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 0bp_to_NM_016767, uc007ohd.1_5end |
EntrezGene: | Batf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.84e-26 | 48 |
immune system | 1.84e-26 | 48 |
hematopoietic system | 1.51e-22 | 45 |
blood island | 1.51e-22 | 45 |
connective tissue | 1.40e-20 | 46 |
thymus | 1.54e-19 | 23 |
neck | 1.54e-19 | 23 |
respiratory system epithelium | 1.54e-19 | 23 |
hemolymphoid system gland | 1.54e-19 | 23 |
pharyngeal epithelium | 1.54e-19 | 23 |
thymic region | 1.54e-19 | 23 |
pharyngeal gland | 1.54e-19 | 23 |
entire pharyngeal arch endoderm | 1.54e-19 | 23 |
thymus primordium | 1.54e-19 | 23 |
early pharyngeal endoderm | 1.54e-19 | 23 |
pharynx | 1.61e-18 | 24 |
gland of gut | 1.61e-18 | 24 |
upper respiratory tract | 1.61e-18 | 24 |
chordate pharynx | 1.61e-18 | 24 |
pharyngeal arch system | 1.61e-18 | 24 |
pharyngeal region of foregut | 1.61e-18 | 24 |
hemopoietic organ | 1.89e-16 | 29 |
immune organ | 1.89e-16 | 29 |
segment of respiratory tract | 6.31e-16 | 27 |
mixed endoderm/mesoderm-derived structure | 1.41e-14 | 35 |
respiratory tract | 2.70e-11 | 41 |
respiratory system | 6.63e-11 | 42 |
craniocervical region | 8.92e-11 | 36 |
lateral plate mesoderm | 4.08e-09 | 87 |
anterior region of body | 2.69e-08 | 43 |
bone marrow | 6.29e-07 | 16 |
unilaminar epithelium | 7.47e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.