FFCP PHASE1:Hg19::chr3:193272673..193272701,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84239|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25422|TSSclassifier=S|UniProt=B3KU47,Q4VNC1|association_with_transcript=0bp_to_ENST00000490925,NM_032279,uc003ftd.2,uc003fte.1,uc011bsr.1_5end|coexpression_cluster_id=C1392|description=CAGE_peak_1_at_ATP13A4_5end|id=chr3:193272673..193272701,-|ontology_enrichment_celltype=CL:0002368!4.16e-07!13|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;9.02e-16;82!UBERON:0002532;8.00e-07;206!UBERON:0010316;8.00e-07;206|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.17e-60!115;UBERON:0001049!9.08e-54!57;UBERON:0005068!9.08e-54!57;UBERON:0006241!9.08e-54!57;UBERON:0007135!9.08e-54!57;UBERON:0002616!1.80e-44!59;UBERON:0001017!1.35e-43!82;UBERON:0003080!1.36e-43!42;UBERON:0002780!1.16e-42!41;UBERON:0001890!1.16e-42!41;UBERON:0006240!1.16e-42!41;UBERON:0005743!3.45e-42!86;UBERON:0000955!4.43e-40!69;UBERON:0006238!4.43e-40!69;UBERON:0000073!8.16e-38!94;UBERON:0001016!8.16e-38!94;UBERON:0001893!7.53e-36!34;UBERON:0002020!9.49e-36!34;UBERON:0003528!9.49e-36!34;UBERON:0003075!1.16e-34!86;UBERON:0007284!1.16e-34!86;UBERON:0002791!1.53e-34!33;UBERON:0001869!1.35e-33!32;UBERON:0002346!2.92e-32!90;UBERON:0000153!1.43e-30!129;UBERON:0007811!1.43e-30!129;UBERON:0000033!2.95e-28!123;UBERON:0003056!4.43e-27!61;UBERON:0000956!1.99e-25!25;UBERON:0000203!1.99e-25!25;UBERON:0004121!7.07e-24!169;UBERON:0002619!1.61e-23!22;UBERON:0000924!8.63e-23!173;UBERON:0006601!8.63e-23!173;UBERON:0001950!4.17e-21!20;UBERON:0004111!5.88e-16!241;UBERON:0000025!8.22e-15!194;UBERON:0000062!8.53e-15!511;UBERON:0000064!4.48e-14!219;UBERON:0000481!1.93e-13!347;UBERON:0000475!5.55e-13!365;UBERON:0000477!1.39e-12!286;UBERON:0000468!7.73e-12!659;UBERON:0002308!9.78e-12!9;UBERON:0000125!9.78e-12!9;UBERON:0002420!1.33e-11!9;UBERON:0007245!1.33e-11!9;UBERON:0010009!1.33e-11!9;UBERON:0010011!1.33e-11!9;UBERON:0000454!1.33e-11!9;UBERON:0000922!3.08e-11!612;UBERON:0003076!3.19e-11!15;UBERON:0003057!3.19e-11!15;UBERON:0002298!7.68e-11!8;UBERON:0000467!1.82e-10!625;UBERON:0000480!2.19e-10!626;UBERON:0001871!8.75e-10!7;UBERON:0002050!1.97e-09!605;UBERON:0005423!1.97e-09!605;UBERON:0009663!2.11e-09!7;UBERON:0000923!4.30e-09!604;UBERON:0005291!4.30e-09!604;UBERON:0006598!4.30e-09!604;UBERON:0002532!4.30e-09!604;UBERON:0004119!6.57e-09!169;UBERON:0000925!6.57e-09!169;UBERON:0006595!6.57e-09!169;UBERON:0004921!2.86e-08!129;UBERON:0004185!2.86e-08!129;UBERON:0004733!4.03e-08!12;UBERON:0002028!4.03e-08!12;UBERON:0007277!4.03e-08!12;UBERON:0001894!4.16e-08!7;UBERON:0006222!4.16e-08!7;UBERON:0000483!1.50e-07!309;UBERON:0000349!1.80e-07!5;UBERON:0001007!2.04e-07!155;UBERON:0001555!2.04e-07!155;UBERON:0007026!2.04e-07!155;UBERON:0004732!2.56e-07!13;UBERON:0000119!2.73e-07!312;UBERON:0001004!3.91e-07!72;UBERON:0001872!5.90e-07!5|ontology_enrichment_uberon_v019=UBERON:0001893;4.97e-36;34!UBERON:0003528;3.11e-34;34!UBERON:0002020;3.11e-34;34!UBERON:0001869;6.45e-34;32!UBERON:0002791;1.16e-33;32!UBERON:0002780;5.38e-32;41!UBERON:0001890;5.38e-32;41!UBERON:0002619;4.40e-31;22!UBERON:0000073;4.18e-30;53!UBERON:0002616;4.18e-30;53!UBERON:0001950;1.22e-27;20!UBERON:0000956;9.27e-27;25!UBERON:0000203;9.27e-27;25!UBERON:0001017;5.81e-22;75!UBERON:0000955;4.56e-20;68!UBERON:0001016;9.30e-18;83!UBERON:0007023;5.49e-17;114!UBERON:0000125;2.97e-16;9!UBERON:0002308;2.97e-16;9!UBERON:0002420;6.55e-16;9!UBERON:0007245;6.55e-16;9!UBERON:0010009;6.55e-16;9!UBERON:0010011;6.55e-16;9!UBERON:0000454;6.55e-16;9!UBERON:0009663;6.96e-13;7!UBERON:0002298;2.61e-12;6!UBERON:0001871;4.85e-12;6!UBERON:0004733;1.53e-11;12!UBERON:0002028;1.53e-11;12!UBERON:0011216;2.41e-11;132!UBERON:0004732;1.67e-10;13!UBERON:0000349;6.18e-10;5!UBERON:0001872;2.44e-09;5!UBERON:0000369;1.64e-08;4!UBERON:0002435;1.64e-08;4!UBERON:0000204;1.64e-08;4!UBERON:0000200;3.46e-08;6!UBERON:0006947;1.58e-07;3!UBERON:0004054;1.58e-07;3!UBERON:0001896;2.47e-07;3!UBERON:0005290;2.47e-07;3!UBERON:0004921;9.97e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.12e-62,114;UBERON:0001049,3.34e-59,56;UBERON:0005068,3.34e-59,56;UBERON:0006241,3.34e-59,56;UBERON:0007135,3.34e-59,56;UBERON:0000073,2.73e-54,53;UBERON:0002616,2.73e-54,53;UBERON:0001017,5.69e-46,81;UBERON:0000955,3.17e-45,68;UBERON:0006238,3.17e-45,68;UBERON:0002780,1.48e-43,41;UBERON:0001890,1.48e-43,41;UBERON:0003080,1.48e-43,41;UBERON:0006240,1.48e-43,41;UBERON:0001016,7.33e-42,89;UBERON:0001893,3.80e-41,34;UBERON:0003528,5.12e-41,34;UBERON:0002020,5.12e-41,34;UBERON:0001869,5.80e-38,32;UBERON:0003075,7.31e-38,82;UBERON:0007284,7.31e-38,82;UBERON:0002791,1.20e-37,32;UBERON:0002346,1.83e-35,86;UBERON:0011216,1.43e-31,223;UBERON:0002619,7.21e-31,22;UBERON:0010371,1.78e-28,104;UBERON:0003056,1.00e-27,61;UBERON:0001950,2.13e-27,20;UBERON:0000956,1.43e-26,25;UBERON:0000203,1.43e-26,25;UBERON:00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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84239 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25422 | |||
|TSSclassifier=S | |||
|UniProt=B3KU47,Q4VNC1 | |||
|association_with_transcript=0bp_to_ENST00000490925,NM_032279,uc003ftd.2,uc003fte.1,uc011bsr.1_5end | |||
|coexpression_cluster_id=C1392 | |||
|description=CAGE_peak_1_at_ATP13A4_5end | |||
|id=chr3:193272673..193272701,- | |||
|ontology_enrichment_celltype=CL:0002368!4.16e-07!13 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.02e-16;82!UBERON:0002532;8.00e-07;206!UBERON:0010316;8.00e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@ATP13A4 | |||
}} |
Revision as of 23:24, 12 September 2013
Short description: | p1@ATP13A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ATP13A4_5end |
Coexpression cluster: | C1392_lung_thyroid_chorionic_epididymis_throat_seminal_tonsil |
Association with transcript: | 0bp_to_ENST00000490925, NM_032279, uc003ftd.2, uc003fte.1, uc011bsr.1_5end |
EntrezGene: | ATP13A4 |
HGNC: | 25422 |
UniProt: | B3KU47Q4VNC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.