FFCP PHASE1:Mm9::chr12:116306223..116306229,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=2030|UniProt=|association_with_transcript=-16bp_to_ENSMUST00000103520_5end|description=CAGE_peak_1_at_ENSMUST00000103520_5end|id=chr12:116306223..116306229,-|ontology_enrichment_celltype=CL:0000553!6.05e-12!6;CL:0000556!6.05e-12!6;CL:0000050!1.37e-07!9|ontology_enrichment_celltype_v019_2=CL:0000553,9.88e-25,6;CL:0000556,9.88e-25,6;CL:0000050,2.57e-16,9;CL:0002027,5.46e-13,3;CL:0002006,5.46e-13,3;CL:0002024,5.46e-13,3;CL:0000839,4.02e-11,13;CL:0000763,6.32e-09,16;CL:0000049,2.02e-07,19;CL:0002031,2.55e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.95e-13!51;UBERON:0002529!5.35e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.48e-12,3;UBERON:0002193,3.64e-10,48;UBERON:0002405,3.64e-10,48;UBERON:0002371,6.32e-09,16;UBERON:0007023,8.94e-09,51;UBERON:0001155,1.03e-08,2;UBERON:0000059,1.03e-08,2;UBERON:0001962,1.13e-08,2;UBERON:0001961,1.13e-08,2;UBERON:0001744,1.13e-08,2;UBERON:0001474,2.34e-08,22;UBERON:0004765,2.34e-08,22;UBERON:0001434,2.34e-08,22|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,15.3230490435205,34.4207954562704,40.5745889314325,52.9976437801839,73.9046797134932,27.1609377150739,0.595303031057488,0,0,7.1996590257033,6.42345986988076,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2280433331755,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.02765491747154,43.2426265690777,0,0,0,0,0,0,0,0,1.01219549843938,2.65383165584962,0,0.883366073841574,0.484875253135222,11.1835056730873,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,7.40461586657924,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0.983528546038072,2.20749397043786,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0.32977250588296,0,0,0,0,0,0,45.1099125306331,0,0,0,3.69074414846768,15.328137604837,0,0.279902904647316,1.93479963326193,0,0,0,0,0,0,0,0,0,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,4.82973985080476,0.187682475451182,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000103520}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=2030 | |||
|UniProt= | |||
|association_with_transcript=-16bp_to_ENSMUST00000103520_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000103520_5end | |||
|id=chr12:116306223..116306229,- | |||
|ontology_enrichment_celltype=CL:0000553!6.05e-12!6;CL:0000556!6.05e-12!6;CL:0000050!1.37e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.88e-25,6;CL:0000556,9.88e-25,6;CL:0000050,2.57e-16,9;CL:0002027,5.46e-13,3;CL:0002006,5.46e-13,3;CL:0002024,5.46e-13,3;CL:0000839,4.02e-11,13;CL:0000763,6.32e-09,16;CL:0000049,2.02e-07,19;CL:0002031,2.55e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.95e-13!51;UBERON:0002529!5.35e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.48e-12,3;UBERON:0002193,3.64e-10,48;UBERON:0002405,3.64e-10,48;UBERON:0002371,6.32e-09,16;UBERON:0007023,8.94e-09,51;UBERON:0001155,1.03e-08,2;UBERON:0000059,1.03e-08,2;UBERON:0001962,1.13e-08,2;UBERON:0001961,1.13e-08,2;UBERON:0001744,1.13e-08,2;UBERON:0001474,2.34e-08,22;UBERON:0004765,2.34e-08,22;UBERON:0001434,2.34e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,15.3230490435205,34.4207954562704,40.5745889314325,52.9976437801839,73.9046797134932,27.1609377150739,0.595303031057488,0,0,7.1996590257033,6.42345986988076,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2280433331755,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.02765491747154,43.2426265690777,0,0,0,0,0,0,0,0,1.01219549843938,2.65383165584962,0,0.883366073841574,0.484875253135222,11.1835056730873,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,7.40461586657924,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0.983528546038072,2.20749397043786,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0.32977250588296,0,0,0,0,0,0,45.1099125306331,0,0,0,3.69074414846768,15.328137604837,0,0.279902904647316,1.93479963326193,0,0,0,0,0,0,0,0,0,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,4.82973985080476,0.187682475451182,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000103520 | |||
}} |
Revision as of 22:29, 12 September 2013
Short description: | p1@ENSMUST00000103520 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103520_5end |
Coexpression cluster: | MCL_coexpression_mm9:2030 |
Association with transcript: | -16bp_to_ENSMUST00000103520_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.88e-25 | 6 |
megakaryocyte | 9.88e-25 | 6 |
megakaryocyte-erythroid progenitor cell | 2.57e-16 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 5.46e-13 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 5.46e-13 | 3 |
Kit-positive megakaryocyte progenitor cell | 5.46e-13 | 3 |
myeloid lineage restricted progenitor cell | 4.02e-11 | 13 |
myeloid cell | 6.32e-09 | 16 |
common myeloid progenitor | 2.02e-07 | 19 |
hematopoietic lineage restricted progenitor cell | 2.55e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.48e-12 | 3 |
hemolymphoid system | 3.64e-10 | 48 |
immune system | 3.64e-10 | 48 |
bone marrow | 6.32e-09 | 16 |
adult organism | 8.94e-09 | 51 |
colon | 1.03e-08 | 2 |
large intestine | 1.03e-08 | 2 |
gut-associated lymphoid tissue | 1.13e-08 | 2 |
mucosa-associated lymphoid tissue | 1.13e-08 | 2 |
lymphoid tissue | 1.13e-08 | 2 |
bone element | 2.34e-08 | 22 |
skeletal element | 2.34e-08 | 22 |
skeletal system | 2.34e-08 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.